RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 IGLV9-49A0A0B4J1Y8 123 aa14.44□□□□□ -0.1
TM6SF1-204ENST00000379390 KRTAP29-1A8MX34 341 aaPredicted RBP14.43□□□□□ -0.1
TM6SF1-204ENST00000379390 TRBV20-1A0A075B6N2 111 aa14.41□□□□□ -0.1
TM6SF1-204ENST00000379390 OCIAD2Q56VL3 154 aa14.41□□□□□ -0.1
TM6SF1-204ENST00000379390 SMIM29Q86T20 159 aa14.41□□□□□ -0.1
TM6SF1-204ENST00000379390 MT1HL1P0DM35 61 aa14.41□□□□□ -0.1
TM6SF1-204ENST00000379390 ORMDL1Q9P0S3 153 aa14.41□□□□□ -0.1
TM6SF1-204ENST00000379390 LAMTOR3Q9UHA4 124 aa14.4□□□□□ -0.1
TM6SF1-204ENST00000379390 MOBPQ13875 183 aa14.39□□□□□ -0.11
TM6SF1-204ENST00000379390 TYMSOSQ8TAI1 123 aa14.39□□□□□ -0.11
TM6SF1-204ENST00000379390 KRTAP10-8P60410 259 aa14.38□□□□□ -0.11
TM6SF1-204ENST00000379390 C9orf153Q5TBE3 101 aa14.37□□□□□ -0.11
TM6SF1-204ENST00000379390 PPDPFLQ8WWR9 84 aa14.37□□□□□ -0.11
TM6SF1-204ENST00000379390 SPCS1Q9Y6A9 102 aa14.37□□□□□ -0.11
TM6SF1-204ENST00000379390 TNXBP22105 4242 aa14.36□□□□□ -0.11
TM6SF1-204ENST00000379390 DMBT1Q9UGM3 2413 aaPredicted RBP14.34□□□□□ -0.11
TM6SF1-204ENST00000379390 H3BMG7 143 aa14.33□□□□□ -0.11
TM6SF1-204ENST00000379390 J3QL48 77 aa14.33□□□□□ -0.11
TM6SF1-204ENST00000379390 GHRHP01286 108 aa14.33□□□□□ -0.12
TM6SF1-204ENST00000379390 C9JAW5 83 aa14.31□□□□□ -0.12
TM6SF1-204ENST00000379390 Q8NBF4 154 aa14.31□□□□□ -0.12
TM6SF1-204ENST00000379390 F8WEM9 126 aa14.3□□□□□ -0.12
TM6SF1-204ENST00000379390 TMEM256-PLSCR3K7ERE1 68 aa14.3□□□□□ -0.12
TM6SF1-204ENST00000379390 BAALC-AS2P0C853 105 aa14.3□□□□□ -0.12
TM6SF1-204ENST00000379390 NDUFV3P56181 108 aaKnown RBP14.3□□□□□ -0.12
TM6SF1-204ENST00000379390 MTURNQ8N3F0 131 aa14.29□□□□□ -0.12
TM6SF1-204ENST00000379390 H3BQ85 93 aa14.28□□□□□ -0.12
TM6SF1-204ENST00000379390 K7EP34 96 aa14.27□□□□□ -0.12
TM6SF1-204ENST00000379390 A0A1B0GV72 72 aa14.26□□□□□ -0.13
TM6SF1-204ENST00000379390 SSBP3-AS1Q7Z2R9 100 aa14.25□□□□□ -0.13
TM6SF1-204ENST00000379390 A0A0G2JQZ4 141 aa14.24□□□□□ -0.13
TM6SF1-204ENST00000379390 UBE2V1Q13404 147 aa14.23□□□□□ -0.13
TM6SF1-204ENST00000379390 LINC00304Q8N9R0 145 aa14.23□□□□□ -0.13
TM6SF1-204ENST00000379390 ANKRD29Q8N6D5 301 aa14.21□□□□□ -0.13
TM6SF1-204ENST00000379390 IGLV8-61A0A075B6I0 122 aa14.2□□□□□ -0.14
TM6SF1-204ENST00000379390 GTF2H5Q6ZYL4 71 aa14.19□□□□□ -0.14
TM6SF1-204ENST00000379390 H3BT86 120 aa14.16□□□□□ -0.14
TM6SF1-204ENST00000379390 IGFL1Q6UW32 110 aa14.16□□□□□ -0.14
TM6SF1-204ENST00000379390 Q6JHZ5 121 aa14.15□□□□□ -0.14
TM6SF1-204ENST00000379390 HRCT1Q6UXD1 115 aa14.15□□□□□ -0.14
TM6SF1-204ENST00000379390 C4orf48Q5BLP8 95 aa14.14□□□□□ -0.15
TM6SF1-204ENST00000379390 A0A1B0GV90 55 aa14.13□□□□□ -0.15
TM6SF1-204ENST00000379390 SMCPP49901 116 aaPredicted RBP14.12□□□□□ -0.15
TM6SF1-204ENST00000379390 PRO0461Q9UI25 63 aa14.12□□□□□ -0.15
TM6SF1-204ENST00000379390 SPAG11AQ6PDA7 123 aa14.1□□□□□ -0.15
TM6SF1-204ENST00000379390 RBM3P98179 157 aaKnown RBP14.08□□□□□ -0.15
TM6SF1-204ENST00000379390 SPINK1P00995 79 aa14.06□□□□□ -0.16
TM6SF1-204ENST00000379390 JMJD7-PLA2G4BH0Y9G9 81 aa14.04□□□□□ -0.16
TM6SF1-204ENST00000379390 CD164Q04900 197 aa14.04□□□□□ -0.16
TM6SF1-204ENST00000379390 DSCR8Q96T75 97 aa14.04□□□□□ -0.16
TM6SF1-204ENST00000379390 TRBV7-4A0A0J9YYF1 115 aa14.03□□□□□ -0.16
TM6SF1-204ENST00000379390 OBSCN-AS1Q96MR7 158 aa14.01□□□□□ -0.17
TM6SF1-204ENST00000379390 C14orf132Q9NPU4 83 aa14.01□□□□□ -0.17
TM6SF1-204ENST00000379390 A0A1W2PNM2 257 aa14□□□□□ -0.17
TM6SF1-204ENST00000379390 F8W1H4 67 aa14□□□□□ -0.17
TM6SF1-204ENST00000379390 CCKP06307 115 aa13.98□□□□□ -0.17
TM6SF1-204ENST00000379390 TRBV7-7A0A0K0K1E9 115 aa13.97□□□□□ -0.17
TM6SF1-204ENST00000379390 TEN1Q86WV5 123 aa13.97□□□□□ -0.17
TM6SF1-204ENST00000379390 RPS29P62273 56 aaKnown RBP13.97□□□□□ -0.17
TM6SF1-204ENST00000379390 VPS25Q9BRG1 176 aa13.97□□□□□ -0.17
TM6SF1-204ENST00000379390 Q6Q795 121 aa13.95□□□□□ -0.18
TM6SF1-204ENST00000379390 HERC1Q15751 4861 aa13.95□□□□□ -0.18
TM6SF1-204ENST00000379390 Q6ZQT0 140 aa13.94□□□□□ -0.18
TM6SF1-204ENST00000379390 RETNLBQ9BQ08 111 aa13.94□□□□□ -0.18
TM6SF1-204ENST00000379390 LOC110117498A0A087WWA1 95 aa13.93□□□□□ -0.18
TM6SF1-204ENST00000379390 LIMD2Q9BT23 127 aa13.93□□□□□ -0.18
TM6SF1-204ENST00000379390 A0A087WSZ3 146 aa13.9□□□□□ -0.19
TM6SF1-204ENST00000379390 ETDBQ3ZM63 59 aa13.9□□□□□ -0.19
TM6SF1-204ENST00000379390 PDE6GP18545 87 aa13.88□□□□□ -0.19
TM6SF1-204ENST00000379390 Q5XG85 94 aa13.86□□□□□ -0.19
TM6SF1-204ENST00000379390 SS18L2Q9UHA2 77 aa13.81□□□□□ -0.2
TM6SF1-204ENST00000379390 PRR4Q16378 134 aa13.8□□□□□ -0.2
TM6SF1-204ENST00000379390 C1orf195Q5TG92 126 aa13.78□□□□□ -0.2
TM6SF1-204ENST00000379390 ASB16-AS1Q495Z4 193 aa13.76□□□□□ -0.21
TM6SF1-204ENST00000379390 C21orf62-AS1Q17RA5 79 aa13.75□□□□□ -0.21
TM6SF1-204ENST00000379390 A0A1B0GW54 56 aa13.71□□□□□ -0.22
TM6SF1-204ENST00000379390 FP248Q71RG6 208 aaPredicted RBP13.71□□□□□ -0.22
TM6SF1-204ENST00000379390 Q96NJ1 140 aa13.7□□□□□ -0.22
TM6SF1-204ENST00000379390 IGLV7-46A0A075B6I9 117 aa13.69□□□□□ -0.22
TM6SF1-204ENST00000379390 DEFB116Q30KQ4 102 aa13.65□□□□□ -0.22
TM6SF1-204ENST00000379390 LINC00472Q9H8W2 130 aa13.64□□□□□ -0.23
TM6SF1-204ENST00000379390 HMCN2Q8NDA2 5059 aa13.6□□□□□ -0.23
TM6SF1-204ENST00000379390 IGKV4-1P06312 121 aa13.59□□□□□ -0.23
TM6SF1-204ENST00000379390 NREPQ16612 68 aa13.59□□□□□ -0.23
TM6SF1-204ENST00000379390 SIGMAR1Q99720 223 aa13.59□□□□□ -0.23
TM6SF1-204ENST00000379390 LINC00846Q9NV44 126 aa13.58□□□□□ -0.24
TM6SF1-204ENST00000379390 LPAP08519 4548 aa13.55□□□□□ -0.24
TM6SF1-204ENST00000379390 Q6ZVQ6 151 aa13.54□□□□□ -0.24
TM6SF1-204ENST00000379390 TPRXLQ17RH7 258 aa13.53□□□□□ -0.24
TM6SF1-204ENST00000379390 KRTAP13-3Q3SY46 172 aa13.53□□□□□ -0.24
TM6SF1-204ENST00000379390 C9orf92A6NGG3 77 aa13.5□□□□□ -0.25
TM6SF1-204ENST00000379390 UBL5Q9BZL1 73 aa13.5□□□□□ -0.25
TM6SF1-204ENST00000379390 J3KT08 172 aa13.48□□□□□ -0.25
TM6SF1-204ENST00000379390 FAM240AA0A1B0GVK7 77 aa13.46□□□□□ -0.26
TM6SF1-204ENST00000379390 ACYP1P07311 99 aa13.44□□□□□ -0.26
TM6SF1-204ENST00000379390 LRP2P98164 4655 aa13.44□□□□□ -0.26
TM6SF1-204ENST00000379390 CDIP1Q9H305 208 aa13.44□□□□□ -0.26
TM6SF1-204ENST00000379390 BPY2O14599 106 aa13.42□□□□□ -0.26
TM6SF1-204ENST00000379390 IGHV6-1A0A0B4J1U7 121 aa13.4□□□□□ -0.26
TM6SF1-204ENST00000379390 A0A1B0GVX0 72 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms