RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 APOBP04114 4563 aaKnown RBP14.87□□□□□ -0.03
ECHDC3-201ENST00000379215 A0A1B0GV72 72 aa14.86□□□□□ -0.03
ECHDC3-201ENST00000379215 SMIM29Q86T20 159 aa14.86□□□□□ -0.03
ECHDC3-201ENST00000379215 LOC110117498A0A087WWA1 95 aa14.84□□□□□ -0.03
ECHDC3-201ENST00000379215 SMR3BP02814 79 aaPredicted RBP14.84□□□□□ -0.03
ECHDC3-201ENST00000379215 C3orf22Q8N5N4 141 aa14.84□□□□□ -0.03
ECHDC3-201ENST00000379215 TRBV7-4A0A0J9YYF1 115 aa14.81□□□□□ -0.04
ECHDC3-201ENST00000379215 SPINK6Q6UWN8 80 aa14.79□□□□□ -0.04
ECHDC3-201ENST00000379215 IGLV8-61A0A075B6I0 122 aa14.78□□□□□ -0.04
ECHDC3-201ENST00000379215 Q6ZQT0 140 aa14.77□□□□□ -0.04
ECHDC3-201ENST00000379215 FAM240AA0A1B0GVK7 77 aa14.77□□□□□ -0.05
ECHDC3-201ENST00000379215 CCKP06307 115 aa14.77□□□□□ -0.05
ECHDC3-201ENST00000379215 FAM229AH3BQW9 127 aa14.76□□□□□ -0.05
ECHDC3-201ENST00000379215 PLA2G1BP04054 148 aaKnown RBP14.76□□□□□ -0.05
ECHDC3-201ENST00000379215 ACYP1P07311 99 aa14.75□□□□□ -0.05
ECHDC3-201ENST00000379215 Q6JHZ5 121 aa14.75□□□□□ -0.05
ECHDC3-201ENST00000379215 VPS13BQ7Z7G8 4022 aa14.73□□□□□ -0.05
ECHDC3-201ENST00000379215 FAM229BQ4G0N7 80 aa14.71□□□□□ -0.05
ECHDC3-201ENST00000379215 SRRM2Q9UQ35 2752 aaKnown RBP14.7□□□□□ -0.06
ECHDC3-201ENST00000379215 KRTAP10-4P60372 401 aaPredicted RBP14.7□□□□□ -0.06
ECHDC3-201ENST00000379215 C9orf153Q5TBE3 101 aa14.68□□□□□ -0.06
ECHDC3-201ENST00000379215 IGLV9-49A0A0B4J1Y8 123 aa14.67□□□□□ -0.06
ECHDC3-201ENST00000379215 A0A1B0GW54 56 aa14.66□□□□□ -0.06
ECHDC3-201ENST00000379215 Q8NBF4 154 aa14.66□□□□□ -0.06
ECHDC3-201ENST00000379215 IGFL1Q6UW32 110 aa14.66□□□□□ -0.06
ECHDC3-201ENST00000379215 VPS25Q9BRG1 176 aa14.66□□□□□ -0.06
ECHDC3-201ENST00000379215 ANAPC11Q9NYG5 84 aa14.65□□□□□ -0.06
ECHDC3-201ENST00000379215 Q5VSD8 79 aa14.62□□□□□ -0.07
ECHDC3-201ENST00000379215 KRTAP1-4P0C5Y4 121 aa14.61□□□□□ -0.07
ECHDC3-201ENST00000379215 MOBPQ13875 183 aa14.61□□□□□ -0.07
ECHDC3-201ENST00000379215 CRYGAP11844 174 aa14.6□□□□□ -0.07
ECHDC3-201ENST00000379215 A0A1W2PNM2 257 aa14.59□□□□□ -0.07
ECHDC3-201ENST00000379215 FAT1Q14517 4588 aa14.58□□□□□ -0.08
ECHDC3-201ENST00000379215 SSBP3-AS1Q7Z2R9 100 aa14.58□□□□□ -0.08
ECHDC3-201ENST00000379215 Q6Q795 121 aa14.57□□□□□ -0.08
ECHDC3-201ENST00000379215 HSPG2P98160 4391 aa14.56□□□□□ -0.08
ECHDC3-201ENST00000379215 RYR1P21817 5038 aa14.56□□□□□ -0.08
ECHDC3-201ENST00000379215 EPPK1P58107 5090 aaKnown RBP14.55□□□□□ -0.08
ECHDC3-201ENST00000379215 Q8N1X5 172 aa14.53□□□□□ -0.08
ECHDC3-201ENST00000379215 LINC00846Q9NV44 126 aa14.53□□□□□ -0.08
ECHDC3-201ENST00000379215 A0A087X002 238 aa14.52□□□□□ -0.08
ECHDC3-201ENST00000379215 UBL5Q9BZL1 73 aa14.52□□□□□ -0.08
ECHDC3-201ENST00000379215 CDIP1Q9H305 208 aa14.51□□□□□ -0.09
ECHDC3-201ENST00000379215 A0A0G2JQZ4 141 aa14.49□□□□□ -0.09
ECHDC3-201ENST00000379215 KRTAP13-2Q52LG2 175 aa14.48□□□□□ -0.09
ECHDC3-201ENST00000379215 CD164Q04900 197 aa14.46□□□□□ -0.09
ECHDC3-201ENST00000379215 LINC00643Q86TS7 51 aa14.44□□□□□ -0.1
ECHDC3-201ENST00000379215 TRBV7-7A0A0K0K1E9 115 aa14.44□□□□□ -0.1
ECHDC3-201ENST00000379215 TYMSOSQ8TAI1 123 aa14.44□□□□□ -0.1
ECHDC3-201ENST00000379215 A0A087WSZ3 146 aa14.42□□□□□ -0.1
ECHDC3-201ENST00000379215 NREPQ16612 68 aa14.41□□□□□ -0.1
ECHDC3-201ENST00000379215 Q6ZVQ6 151 aa14.41□□□□□ -0.1
ECHDC3-201ENST00000379215 KIAA1109Q2LD37 5005 aa14.41□□□□□ -0.1
ECHDC3-201ENST00000379215 SS18L2Q9UHA2 77 aa14.39□□□□□ -0.11
ECHDC3-201ENST00000379215 ATP5EP2Q5VTU8 51 aa14.38□□□□□ -0.11
ECHDC3-201ENST00000379215 PRR26Q8N8Z3 221 aa14.38□□□□□ -0.11
ECHDC3-201ENST00000379215 PKHD1L1Q86WI1 4243 aa14.37□□□□□ -0.11
ECHDC3-201ENST00000379215 HRCT1Q6UXD1 115 aa14.36□□□□□ -0.11
ECHDC3-201ENST00000379215 C4orf48Q5BLP8 95 aa14.33□□□□□ -0.11
ECHDC3-201ENST00000379215 SIGMAR1Q99720 223 aa14.31□□□□□ -0.12
ECHDC3-201ENST00000379215 SPAG11AQ6PDA7 123 aa14.3□□□□□ -0.12
ECHDC3-201ENST00000379215 KRTAP17-1Q9BYP8 105 aa14.3□□□□□ -0.12
ECHDC3-201ENST00000379215 CXCL6P80162 114 aa14.29□□□□□ -0.12
ECHDC3-201ENST00000379215 SPINK1P00995 79 aa14.27□□□□□ -0.12
ECHDC3-201ENST00000379215 LINC00304Q8N9R0 145 aa14.27□□□□□ -0.12
ECHDC3-201ENST00000379215 BPY2O14599 106 aa14.26□□□□□ -0.13
ECHDC3-201ENST00000379215 MT-ATP8P03928 68 aa14.26□□□□□ -0.13
ECHDC3-201ENST00000379215 LIMD2Q9BT23 127 aa14.26□□□□□ -0.13
ECHDC3-201ENST00000379215 Q5XG85 94 aa14.26□□□□□ -0.13
ECHDC3-201ENST00000379215 RPS29P62273 56 aaKnown RBP14.23□□□□□ -0.13
ECHDC3-201ENST00000379215 IGKV3D-7A0A0C4DH55 119 aa14.23□□□□□ -0.13
ECHDC3-201ENST00000379215 ASB16-AS1Q495Z4 193 aa14.23□□□□□ -0.13
ECHDC3-201ENST00000379215 IMUPQ9GZP8 106 aa14.22□□□□□ -0.13
ECHDC3-201ENST00000379215 LINC00472Q9H8W2 130 aa14.21□□□□□ -0.13
ECHDC3-201ENST00000379215 BIRC6Q9NR09 4857 aa14.2□□□□□ -0.14
ECHDC3-201ENST00000379215 J3KT08 172 aa14.2□□□□□ -0.14
ECHDC3-201ENST00000379215 KRTAP10-8P60410 259 aa14.15□□□□□ -0.14
ECHDC3-201ENST00000379215 Q96NJ1 140 aa14.12□□□□□ -0.15
ECHDC3-201ENST00000379215 OXTP01178 125 aa14.11□□□□□ -0.15
ECHDC3-201ENST00000379215 HIST1H4AP62805 103 aaKnown RBP14.1□□□□□ -0.15
ECHDC3-201ENST00000379215 DEFB116Q30KQ4 102 aa14.09□□□□□ -0.15
ECHDC3-201ENST00000379215 IGKV4-1P06312 121 aa14.08□□□□□ -0.15
ECHDC3-201ENST00000379215 DSCR10P59022 87 aa14.08□□□□□ -0.15
ECHDC3-201ENST00000379215 A8MWP4 228 aa14.06□□□□□ -0.16
ECHDC3-201ENST00000379215 NDUFB1O75438 58 aa14.05□□□□□ -0.16
ECHDC3-201ENST00000379215 KRTAP4-5Q9BYR2 181 aa14.04□□□□□ -0.16
ECHDC3-201ENST00000379215 C1orf195Q5TG92 126 aa14.02□□□□□ -0.16
ECHDC3-201ENST00000379215 FAT3Q8TDW7 4589 aa14.01□□□□□ -0.17
ECHDC3-201ENST00000379215 K7EQZ3 153 aa14.01□□□□□ -0.17
ECHDC3-201ENST00000379215 Q8N9L7 120 aa14.01□□□□□ -0.17
ECHDC3-201ENST00000379215 PRR15Q8IV56 129 aa13.99□□□□□ -0.17
ECHDC3-201ENST00000379215 HERC2O95714 4834 aa13.99□□□□□ -0.17
ECHDC3-201ENST00000379215 LRP1Q07954 4544 aaKnown RBP13.98□□□□□ -0.17
ECHDC3-201ENST00000379215 SCGB1A1P11684 91 aa13.97□□□□□ -0.17
ECHDC3-201ENST00000379215 MT1HL1P0DM35 61 aa13.97□□□□□ -0.17
ECHDC3-201ENST00000379215 FLG2Q5D862 2391 aaPredicted RBP13.96□□□□□ -0.17
ECHDC3-201ENST00000379215 A0A087WVE0 104 aa13.96□□□□□ -0.17
ECHDC3-201ENST00000379215 KRTAP29-1A8MX34 341 aaPredicted RBP13.96□□□□□ -0.17
ECHDC3-201ENST00000379215 TNXBP22105 4242 aa13.95□□□□□ -0.18
ECHDC3-201ENST00000379215 A0A1B0GVX0 72 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms