RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 LCE6AA0A183 80 aa12.12□□□□□ -0.47
PCDH8-202ENST00000377942 A8MUN3 132 aa12.12□□□□□ -0.47
PCDH8-202ENST00000377942 GCN1Q92616 2671 aaKnown RBP12.11□□□□□ -0.47
PCDH8-202ENST00000377942 IGLV7-46A0A075B6I9 117 aa12.11□□□□□ -0.47
PCDH8-202ENST00000377942 OCR1Q9BZK8 76 aa12.09□□□□□ -0.47
PCDH8-202ENST00000377942 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
PCDH8-202ENST00000377942 TRIOO75962 3097 aa12.04□□□□□ -0.48
PCDH8-202ENST00000377942 MAP1AP78559 2803 aaPredicted RBP12.04□□□□□ -0.48
PCDH8-202ENST00000377942 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
PCDH8-202ENST00000377942 Q6ZSA8 131 aa12.02□□□□□ -0.49
PCDH8-202ENST00000377942 Q8N1X5 172 aa11.99□□□□□ -0.49
PCDH8-202ENST00000377942 UNC80Q8N2C7 3258 aa11.99□□□□□ -0.49
PCDH8-202ENST00000377942 MIR22HGQ0VDD5 57 aa11.98□□□□□ -0.49
PCDH8-202ENST00000377942 Q6ZR54 194 aa11.98□□□□□ -0.49
PCDH8-202ENST00000377942 FLNCQ14315 2725 aa11.97□□□□□ -0.49
PCDH8-202ENST00000377942 MMP24-AS1A0A0U1RRL7 71 aa11.96□□□□□ -0.49
PCDH8-202ENST00000377942 KRTAP10-1P60331 282 aa11.96□□□□□ -0.5
PCDH8-202ENST00000377942 ITPR2Q14571 2701 aa11.95□□□□□ -0.5
PCDH8-202ENST00000377942 VPS13AQ96RL7 3174 aa11.95□□□□□ -0.5
PCDH8-202ENST00000377942 LINC00472Q9H8W2 130 aa11.93□□□□□ -0.5
PCDH8-202ENST00000377942 KRTAP10-2P60368 255 aa11.92□□□□□ -0.5
PCDH8-202ENST00000377942 NSD1Q96L73 2696 aaPredicted RBP11.91□□□□□ -0.5
PCDH8-202ENST00000377942 ZCCHC13Q8WW36 166 aaKnown RBP11.9□□□□□ -0.51
PCDH8-202ENST00000377942 XIRP2A4UGR9 3374 aa11.89□□□□□ -0.51
PCDH8-202ENST00000377942 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
PCDH8-202ENST00000377942 Q5VSD8 79 aa11.86□□□□□ -0.51
PCDH8-202ENST00000377942 NBEAL2Q6ZNJ1 2754 aa11.86□□□□□ -0.51
PCDH8-202ENST00000377942 LINC00483Q53H64 154 aa11.86□□□□□ -0.51
PCDH8-202ENST00000377942 HRES1P13985 223 aa11.85□□□□□ -0.51
PCDH8-202ENST00000377942 FRYQ5TBA9 3013 aa11.84□□□□□ -0.51
PCDH8-202ENST00000377942 KRTAP4-16G5E9R7 235 aaPredicted RBP11.83□□□□□ -0.52
PCDH8-202ENST00000377942 CDH23Q9H251 3354 aa11.81□□□□□ -0.52
PCDH8-202ENST00000377942 KRTAP21-3Q3LHN1 58 aa11.81□□□□□ -0.52
PCDH8-202ENST00000377942 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
PCDH8-202ENST00000377942 CRIPTQ9P021 101 aa11.77□□□□□ -0.53
PCDH8-202ENST00000377942 PANO1I0J062 215 aa11.76□□□□□ -0.53
PCDH8-202ENST00000377942 Q5XG85 94 aa11.73□□□□□ -0.53
PCDH8-202ENST00000377942 Q5W150 140 aa11.71□□□□□ -0.53
PCDH8-202ENST00000377942 Q8N9P0 234 aaPredicted RBP11.71□□□□□ -0.53
PCDH8-202ENST00000377942 HIVEP1P15822 2718 aa11.71□□□□□ -0.53
PCDH8-202ENST00000377942 CYSTM1Q9H1C7 97 aa11.71□□□□□ -0.53
PCDH8-202ENST00000377942 ATMQ13315 3056 aa11.71□□□□□ -0.54
PCDH8-202ENST00000377942 SEC61BP60468 96 aaKnown RBP11.7□□□□□ -0.54
PCDH8-202ENST00000377942 Q6ZRN7 208 aaPredicted RBP11.7□□□□□ -0.54
PCDH8-202ENST00000377942 LINC01554Q52M75 96 aa11.7□□□□□ -0.54
PCDH8-202ENST00000377942 Q1T7F1 81 aa11.69□□□□□ -0.54
PCDH8-202ENST00000377942 FRYLO94915 3013 aa11.68□□□□□ -0.54
PCDH8-202ENST00000377942 FP248Q71RG6 208 aaPredicted RBP11.67□□□□□ -0.54
PCDH8-202ENST00000377942 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
PCDH8-202ENST00000377942 SPINK7P58062 85 aa11.66□□□□□ -0.54
PCDH8-202ENST00000377942 SPINT4Q6UDR6 99 aa11.66□□□□□ -0.54
PCDH8-202ENST00000377942 STAB2Q8WWQ8 2551 aa11.66□□□□□ -0.54
PCDH8-202ENST00000377942 A0A0D9SG42 100 aa11.65□□□□□ -0.54
PCDH8-202ENST00000377942 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
PCDH8-202ENST00000377942 COL12A1Q99715 3063 aa11.64□□□□□ -0.55
PCDH8-202ENST00000377942 UTP20O75691 2785 aaKnown RBP11.64□□□□□ -0.55
PCDH8-202ENST00000377942 SZT2Q5T011 3432 aa11.64□□□□□ -0.55
PCDH8-202ENST00000377942 TACC2O95359 2948 aa11.61□□□□□ -0.55
PCDH8-202ENST00000377942 A0A1B0GU33 70 aa11.61□□□□□ -0.55
PCDH8-202ENST00000377942 M0R2T5 61 aa11.58□□□□□ -0.56
PCDH8-202ENST00000377942 LAMA1P25391 3075 aa11.58□□□□□ -0.56
PCDH8-202ENST00000377942 S4R3F8 94 aa11.57□□□□□ -0.56
PCDH8-202ENST00000377942 TNRC18O15417 2968 aaPredicted RBP11.57□□□□□ -0.56
PCDH8-202ENST00000377942 DMXL2Q8TDJ6 3036 aa11.57□□□□□ -0.56
PCDH8-202ENST00000377942 APCP25054 2843 aa11.56□□□□□ -0.56
PCDH8-202ENST00000377942 LINC01558Q9Y6Z2 57 aa11.55□□□□□ -0.56
PCDH8-202ENST00000377942 OXTP01178 125 aa11.54□□□□□ -0.56
PCDH8-202ENST00000377942 A0A087X002 238 aa11.54□□□□□ -0.56
PCDH8-202ENST00000377942 Q75L30 129 aa11.51□□□□□ -0.57
PCDH8-202ENST00000377942 KTN1-AS1Q86SY8 53 aa11.5□□□□□ -0.57
PCDH8-202ENST00000377942 ASB16-AS1Q495Z4 193 aa11.49□□□□□ -0.57
PCDH8-202ENST00000377942 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
PCDH8-202ENST00000377942 ADGRG4Q8IZF6 3080 aa11.49□□□□□ -0.57
PCDH8-202ENST00000377942 KALRNO60229 2985 aa11.47□□□□□ -0.57
PCDH8-202ENST00000377942 NIPBLQ6KC79 2804 aaeCLIP11.46□□□□□ -0.57
PCDH8-202ENST00000377942 KRTAP29-1A8MX34 341 aaPredicted RBP11.46□□□□□ -0.57
PCDH8-202ENST00000377942 KRTAP11-1Q8IUC1 163 aa11.46□□□□□ -0.58
PCDH8-202ENST00000377942 KRTAP7-1Q8IUC3 87 aa11.45□□□□□ -0.58
PCDH8-202ENST00000377942 CAMK2N1Q7Z7J9 78 aa11.45□□□□□ -0.58
PCDH8-202ENST00000377942 DMAC1Q96GE9 116 aa11.44□□□□□ -0.58
PCDH8-202ENST00000377942 CELSR3Q9NYQ7 3312 aa11.44□□□□□ -0.58
PCDH8-202ENST00000377942 TENM4Q6N022 2769 aa11.41□□□□□ -0.58
PCDH8-202ENST00000377942 BOD1L1Q8NFC6 3051 aa11.41□□□□□ -0.58
PCDH8-202ENST00000377942 LRBAP50851 2863 aa11.4□□□□□ -0.58
PCDH8-202ENST00000377942 EYSQ5T1H1 3165 aa11.39□□□□□ -0.59
PCDH8-202ENST00000377942 VCANP13611 3396 aa11.39□□□□□ -0.59
PCDH8-202ENST00000377942 LCA10Q71F78 164 aa11.39□□□□□ -0.59
PCDH8-202ENST00000377942 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
PCDH8-202ENST00000377942 ZZEF1O43149 2961 aa11.37□□□□□ -0.59
PCDH8-202ENST00000377942 COL6A3P12111 3177 aa11.36□□□□□ -0.59
PCDH8-202ENST00000377942 DMBT1Q9UGM3 2413 aaPredicted RBP11.34□□□□□ -0.59
PCDH8-202ENST00000377942 FLG2Q5D862 2391 aaPredicted RBP11.34□□□□□ -0.59
PCDH8-202ENST00000377942 NBEAQ8NFP9 2946 aa11.33□□□□□ -0.6
PCDH8-202ENST00000377942 R4GN34 69 aa11.3□□□□□ -0.6
PCDH8-202ENST00000377942 REV3LO60673 3130 aa11.26□□□□□ -0.61
PCDH8-202ENST00000377942 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
PCDH8-202ENST00000377942 NOTCH2NLQ7Z3S9 236 aa11.24□□□□□ -0.61
PCDH8-202ENST00000377942 Q5VV11 94 aa11.23□□□□□ -0.61
PCDH8-202ENST00000377942 ZANQ9Y493 2812 aa11.23□□□□□ -0.61
PCDH8-202ENST00000377942 CELSR2Q9HCU4 2923 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms