RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 A0A1W2PNN7 141 aa8.85□□□□□ -0.99
MSH5-202ENST00000375740 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
MSH5-202ENST00000375740 NUPR2A6NF83 97 aa8.85□□□□□ -0.99
MSH5-202ENST00000375740 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
MSH5-202ENST00000375740 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
MSH5-202ENST00000375740 A8MU10 97 aa8.83□□□□□ -1
MSH5-202ENST00000375740 C14orf177Q52M58 125 aa8.83□□□□□ -1
MSH5-202ENST00000375740 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
MSH5-202ENST00000375740 UBE2BP63146 152 aa8.83□□□□□ -1
MSH5-202ENST00000375740 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
MSH5-202ENST00000375740 PRR15Q8IV56 129 aa8.82□□□□□ -1
MSH5-202ENST00000375740 PMAIP1Q13794 54 aa8.82□□□□□ -1
MSH5-202ENST00000375740 TENM2Q9NT68 2774 aa8.82□□□□□ -1
MSH5-202ENST00000375740 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
MSH5-202ENST00000375740 DYNC2H1Q8NCM8 4307 aaKnown RBP8.81□□□□□ -1
MSH5-202ENST00000375740 Q1T7F1 81 aa8.81□□□□□ -1
MSH5-202ENST00000375740 A0A1W2PNM2 257 aa8.8□□□□□ -1
MSH5-202ENST00000375740 CHTF8P0CG12 524 aa8.8□□□□□ -1
MSH5-202ENST00000375740 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
MSH5-202ENST00000375740 LCE6AA0A183 80 aa8.79□□□□□ -1
MSH5-202ENST00000375740 TRAV22A0A0B4J277 110 aa8.79□□□□□ -1
MSH5-202ENST00000375740 ZCCHC13Q8WW36 166 aaKnown RBP8.79□□□□□ -1
MSH5-202ENST00000375740 Q6ZRN7 208 aaPredicted RBP8.77□□□□□ -1
MSH5-202ENST00000375740 C9orf163Q8N9P6 203 aa8.77□□□□□ -1
MSH5-202ENST00000375740 TNP2Q05952 138 aa8.77□□□□□ -1.01
MSH5-202ENST00000375740 K7EQZ3 153 aa8.76□□□□□ -1.01
MSH5-202ENST00000375740 DSCR10P59022 87 aa8.76□□□□□ -1.01
MSH5-202ENST00000375740 PRLHP81277 87 aa8.76□□□□□ -1.01
MSH5-202ENST00000375740 PHF5AQ7RTV0 110 aaKnown RBP8.76□□□□□ -1.01
MSH5-202ENST00000375740 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
MSH5-202ENST00000375740 PLECQ15149 4684 aaKnown RBP8.75□□□□□ -1.01
MSH5-202ENST00000375740 A8MUN3 132 aa8.75□□□□□ -1.01
MSH5-202ENST00000375740 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
MSH5-202ENST00000375740 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
MSH5-202ENST00000375740 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
MSH5-202ENST00000375740 PANO1I0J062 215 aa8.7□□□□□ -1.02
MSH5-202ENST00000375740 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
MSH5-202ENST00000375740 Q8NBF4 154 aa8.69□□□□□ -1.02
MSH5-202ENST00000375740 A0A1B0GW54 56 aa8.68□□□□□ -1.02
MSH5-202ENST00000375740 LINC00476Q8WZB0 136 aa8.67□□□□□ -1.02
MSH5-202ENST00000375740 CYP4F30PQ9H0H9 118 aa8.67□□□□□ -1.02
MSH5-202ENST00000375740 STARD9Q9P2P6 4700 aa8.67□□□□□ -1.02
MSH5-202ENST00000375740 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
MSH5-202ENST00000375740 Q5VV11 94 aa8.66□□□□□ -1.02
MSH5-202ENST00000375740 A0A087WTM6 91 aa8.66□□□□□ -1.02
MSH5-202ENST00000375740 PRKDCP78527 4128 aaKnown RBP8.65□□□□□ -1.03
MSH5-202ENST00000375740 H0Y9J4 135 aa8.65□□□□□ -1.03
MSH5-202ENST00000375740 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.03
MSH5-202ENST00000375740 MEGF8Q7Z7M0 2845 aa8.65□□□□□ -1.03
MSH5-202ENST00000375740 HCG22E2RYF7 251 aa8.64□□□□□ -1.03
MSH5-202ENST00000375740 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
MSH5-202ENST00000375740 IGFL1Q6UW32 110 aa8.64□□□□□ -1.03
MSH5-202ENST00000375740 UBE2AP49459 152 aa8.63□□□□□ -1.03
MSH5-202ENST00000375740 Q6ZR54 194 aa8.63□□□□□ -1.03
MSH5-202ENST00000375740 SPACA4Q8TDM5 124 aa8.62□□□□□ -1.03
MSH5-202ENST00000375740 VPS13DQ5THJ4 4388 aa8.61□□□□□ -1.03
MSH5-202ENST00000375740 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
MSH5-202ENST00000375740 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
MSH5-202ENST00000375740 SPRR1BP22528 89 aa8.59□□□□□ -1.03
MSH5-202ENST00000375740 RPL37AP61513 92 aaKnown RBP8.59□□□□□ -1.03
MSH5-202ENST00000375740 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
MSH5-202ENST00000375740 RTL8CO15255 209 aa8.58□□□□□ -1.04
MSH5-202ENST00000375740 Q8N9P0 234 aaPredicted RBP8.58□□□□□ -1.04
MSH5-202ENST00000375740 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
MSH5-202ENST00000375740 SRRM2Q9UQ35 2752 aaKnown RBP8.57□□□□□ -1.04
MSH5-202ENST00000375740 CD164Q04900 197 aa8.56□□□□□ -1.04
MSH5-202ENST00000375740 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
MSH5-202ENST00000375740 NDUFB1O75438 58 aa8.55□□□□□ -1.04
MSH5-202ENST00000375740 MP68P56378 58 aa8.55□□□□□ -1.04
MSH5-202ENST00000375740 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
MSH5-202ENST00000375740 DNHD1Q96M86 4753 aa8.54□□□□□ -1.04
MSH5-202ENST00000375740 A0A087WSZ3 146 aa8.54□□□□□ -1.04
MSH5-202ENST00000375740 C1orf134Q5TEV5 83 aa8.54□□□□□ -1.04
MSH5-202ENST00000375740 LCA10Q71F78 164 aa8.54□□□□□ -1.04
MSH5-202ENST00000375740 LY6G6CO95867 125 aa8.53□□□□□ -1.04
MSH5-202ENST00000375740 IGLV5-52A0A0A0MRZ9 124 aa8.51□□□□□ -1.05
MSH5-202ENST00000375740 KMT2AQ03164 3969 aa8.51□□□□□ -1.05
MSH5-202ENST00000375740 H0Y9P7 68 aa8.5□□□□□ -1.05
MSH5-202ENST00000375740 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
MSH5-202ENST00000375740 PLAC8Q9NZF1 115 aa8.49□□□□□ -1.05
MSH5-202ENST00000375740 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
MSH5-202ENST00000375740 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
MSH5-202ENST00000375740 KTN1-AS1Q86SY8 53 aa8.48□□□□□ -1.05
MSH5-202ENST00000375740 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
MSH5-202ENST00000375740 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
MSH5-202ENST00000375740 FBN3Q75N90 2809 aa8.46□□□□□ -1.05
MSH5-202ENST00000375740 DNAH2Q9P225 4427 aa8.46□□□□□ -1.06
MSH5-202ENST00000375740 SPANXA2-OT1Q8N9U9 137 aa8.46□□□□□ -1.06
MSH5-202ENST00000375740 TGP01266 2768 aa8.46□□□□□ -1.06
MSH5-202ENST00000375740 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
MSH5-202ENST00000375740 A6NED7 52 aa8.45□□□□□ -1.06
MSH5-202ENST00000375740 CASC2Q6XLA1 102 aa8.45□□□□□ -1.06
MSH5-202ENST00000375740 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
MSH5-202ENST00000375740 DNAH17Q9UFH2 4485 aa8.43□□□□□ -1.06
MSH5-202ENST00000375740 COA5Q86WW8 74 aa8.43□□□□□ -1.06
MSH5-202ENST00000375740 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
MSH5-202ENST00000375740 A6NN06 94 aa8.41□□□□□ -1.06
MSH5-202ENST00000375740 ZNF861PO60384 105 aa8.41□□□□□ -1.06
MSH5-202ENST00000375740 Q75L30 129 aa8.41□□□□□ -1.06
MSH5-202ENST00000375740 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms