RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SMCR5Q8TEV8 140 aa11.09□□□□□ -0.63
CDX4-201ENST00000373514 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
CDX4-201ENST00000373514 ERC2-IT1O76042 136 aa11.07□□□□□ -0.64
CDX4-201ENST00000373514 ETDBQ3ZM63 59 aa11.07□□□□□ -0.64
CDX4-201ENST00000373514 PRR26Q8N8Z3 221 aa11.06□□□□□ -0.64
CDX4-201ENST00000373514 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
CDX4-201ENST00000373514 TMEM256-PLSCR3K7ERE1 68 aa11.04□□□□□ -0.64
CDX4-201ENST00000373514 OCIAD2Q56VL3 154 aa11.04□□□□□ -0.64
CDX4-201ENST00000373514 TEN1Q86WV5 123 aa11.04□□□□□ -0.64
CDX4-201ENST00000373514 ST20-AS1Q8NBB2 130 aa11.03□□□□□ -0.64
CDX4-201ENST00000373514 H3BQ85 93 aa11.02□□□□□ -0.65
CDX4-201ENST00000373514 GHRHP01286 108 aa11.02□□□□□ -0.65
CDX4-201ENST00000373514 TNXBP22105 4242 aa11.02□□□□□ -0.65
CDX4-201ENST00000373514 A0A087X002 238 aa11.01□□□□□ -0.65
CDX4-201ENST00000373514 KRTAP10-8P60410 259 aa11□□□□□ -0.65
CDX4-201ENST00000373514 DEFB105AQ8NG35 78 aa11□□□□□ -0.65
CDX4-201ENST00000373514 SPRR4Q96PI1 79 aa11□□□□□ -0.65
CDX4-201ENST00000373514 LINC01547P58512 204 aaPredicted RBP10.99□□□□□ -0.65
CDX4-201ENST00000373514 IGLV5-48A0A075B6I7 105 aa10.98□□□□□ -0.65
CDX4-201ENST00000373514 TEX49A0A1B0GTD5 131 aa10.98□□□□□ -0.65
CDX4-201ENST00000373514 Q8N377 158 aa10.98□□□□□ -0.65
CDX4-201ENST00000373514 PPDPFLQ8WWR9 84 aa10.96□□□□□ -0.65
CDX4-201ENST00000373514 KRTAP13-2Q52LG2 175 aa10.95□□□□□ -0.66
CDX4-201ENST00000373514 LAMTOR3Q9UHA4 124 aa10.95□□□□□ -0.66
CDX4-201ENST00000373514 A0A1B0GV72 72 aa10.94□□□□□ -0.66
CDX4-201ENST00000373514 ZNF706Q9Y5V0 76 aaPredicted RBP10.94□□□□□ -0.66
CDX4-201ENST00000373514 HERC1Q15751 4861 aa10.94□□□□□ -0.66
CDX4-201ENST00000373514 CRYGAP11844 174 aa10.94□□□□□ -0.66
CDX4-201ENST00000373514 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
CDX4-201ENST00000373514 OBSCN-AS1Q96MR7 158 aa10.94□□□□□ -0.66
CDX4-201ENST00000373514 NDUFV3P56181 108 aaKnown RBP10.93□□□□□ -0.66
CDX4-201ENST00000373514 FAM229BQ4G0N7 80 aa10.93□□□□□ -0.66
CDX4-201ENST00000373514 JMJD7-PLA2G4BH0Y9G9 81 aa10.91□□□□□ -0.66
CDX4-201ENST00000373514 C3orf22Q8N5N4 141 aa10.91□□□□□ -0.66
CDX4-201ENST00000373514 LINC00483Q53H64 154 aa10.9□□□□□ -0.66
CDX4-201ENST00000373514 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
CDX4-201ENST00000373514 SPRR1BP22528 89 aa10.88□□□□□ -0.67
CDX4-201ENST00000373514 RBM3P98179 157 aaKnown RBP10.88□□□□□ -0.67
CDX4-201ENST00000373514 SMIM29Q86T20 159 aa10.88□□□□□ -0.67
CDX4-201ENST00000373514 TYMSOSQ8TAI1 123 aa10.88□□□□□ -0.67
CDX4-201ENST00000373514 J3QR89 54 aa10.84□□□□□ -0.67
CDX4-201ENST00000373514 K7ERU9 68 aa10.84□□□□□ -0.67
CDX4-201ENST00000373514 IGLV9-49A0A0B4J1Y8 123 aa10.83□□□□□ -0.68
CDX4-201ENST00000373514 DSCR8Q96T75 97 aa10.82□□□□□ -0.68
CDX4-201ENST00000373514 F8WEM9 126 aa10.81□□□□□ -0.68
CDX4-201ENST00000373514 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
CDX4-201ENST00000373514 KRTAP3-2Q9BYR7 98 aa10.81□□□□□ -0.68
CDX4-201ENST00000373514 MOBPQ13875 183 aa10.8□□□□□ -0.68
CDX4-201ENST00000373514 LOC110117498A0A087WWA1 95 aa10.79□□□□□ -0.68
CDX4-201ENST00000373514 TRBV7-4A0A0J9YYF1 115 aa10.79□□□□□ -0.68
CDX4-201ENST00000373514 Q6ZQT0 140 aa10.79□□□□□ -0.68
CDX4-201ENST00000373514 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
CDX4-201ENST00000373514 LINC00304Q8N9R0 145 aa10.77□□□□□ -0.69
CDX4-201ENST00000373514 CCKP06307 115 aa10.76□□□□□ -0.69
CDX4-201ENST00000373514 PDE6GP18545 87 aa10.76□□□□□ -0.69
CDX4-201ENST00000373514 Q8NBF4 154 aa10.76□□□□□ -0.69
CDX4-201ENST00000373514 IGLV8-61A0A075B6I0 122 aa10.75□□□□□ -0.69
CDX4-201ENST00000373514 VPS25Q9BRG1 176 aa10.72□□□□□ -0.69
CDX4-201ENST00000373514 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
CDX4-201ENST00000373514 IGFL1Q6UW32 110 aa10.71□□□□□ -0.69
CDX4-201ENST00000373514 A0A0G2JQZ4 141 aa10.69□□□□□ -0.7
CDX4-201ENST00000373514 C21orf62-AS1Q17RA5 79 aa10.69□□□□□ -0.7
CDX4-201ENST00000373514 HMCN2Q8NDA2 5059 aa10.69□□□□□ -0.7
CDX4-201ENST00000373514 ACYP1P07311 99 aa10.68□□□□□ -0.7
CDX4-201ENST00000373514 Q6JHZ5 121 aa10.68□□□□□ -0.7
CDX4-201ENST00000373514 A0A1W2PNM2 257 aa10.68□□□□□ -0.7
CDX4-201ENST00000373514 SSBP3-AS1Q7Z2R9 100 aa10.67□□□□□ -0.7
CDX4-201ENST00000373514 RETNLBQ9BQ08 111 aa10.63□□□□□ -0.71
CDX4-201ENST00000373514 CDIP1Q9H305 208 aa10.63□□□□□ -0.71
CDX4-201ENST00000373514 LINC00846Q9NV44 126 aa10.63□□□□□ -0.71
CDX4-201ENST00000373514 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
CDX4-201ENST00000373514 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
CDX4-201ENST00000373514 HRCT1Q6UXD1 115 aa10.61□□□□□ -0.71
CDX4-201ENST00000373514 Q6Q795 121 aa10.58□□□□□ -0.72
CDX4-201ENST00000373514 A0A1B0GW54 56 aa10.58□□□□□ -0.72
CDX4-201ENST00000373514 SPINK1P00995 79 aa10.58□□□□□ -0.72
CDX4-201ENST00000373514 PRR4Q16378 134 aa10.56□□□□□ -0.72
CDX4-201ENST00000373514 UBL5Q9BZL1 73 aa10.55□□□□□ -0.72
CDX4-201ENST00000373514 A0A087WSZ3 146 aa10.53□□□□□ -0.72
CDX4-201ENST00000373514 TRBV7-7A0A0K0K1E9 115 aa10.52□□□□□ -0.73
CDX4-201ENST00000373514 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.73
CDX4-201ENST00000373514 Q6ZVQ6 151 aa10.52□□□□□ -0.73
CDX4-201ENST00000373514 LINC00643Q86TS7 51 aa10.5□□□□□ -0.73
CDX4-201ENST00000373514 NREPQ16612 68 aa10.49□□□□□ -0.73
CDX4-201ENST00000373514 CD164Q04900 197 aa10.48□□□□□ -0.73
CDX4-201ENST00000373514 LPAP08519 4548 aa10.47□□□□□ -0.73
CDX4-201ENST00000373514 MT-ATP8P03928 68 aa10.47□□□□□ -0.73
CDX4-201ENST00000373514 LIMD2Q9BT23 127 aa10.45□□□□□ -0.74
CDX4-201ENST00000373514 IGKV3D-7A0A0C4DH55 119 aa10.43□□□□□ -0.74
CDX4-201ENST00000373514 SIGMAR1Q99720 223 aa10.43□□□□□ -0.74
CDX4-201ENST00000373514 LRP2P98164 4655 aa10.43□□□□□ -0.74
CDX4-201ENST00000373514 SS18L2Q9UHA2 77 aa10.42□□□□□ -0.74
CDX4-201ENST00000373514 IGLV7-46A0A075B6I9 117 aa10.41□□□□□ -0.74
CDX4-201ENST00000373514 ATP5EP2Q5VTU8 51 aa10.4□□□□□ -0.74
CDX4-201ENST00000373514 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
CDX4-201ENST00000373514 BPY2O14599 106 aa10.38□□□□□ -0.75
CDX4-201ENST00000373514 CXCL6P80162 114 aa10.37□□□□□ -0.75
CDX4-201ENST00000373514 DEFB116Q30KQ4 102 aa10.37□□□□□ -0.75
CDX4-201ENST00000373514 Q5XG85 94 aa10.37□□□□□ -0.75
CDX4-201ENST00000373514 LINC00472Q9H8W2 130 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms