RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
SMARCA1-203ENST00000371123 CDK2AP2O75956 126 aa5.66□□□□□ -1.5
SMARCA1-203ENST00000371123 PDE6GP18545 87 aa5.66□□□□□ -1.5
SMARCA1-203ENST00000371123 CD164Q04900 197 aa5.66□□□□□ -1.5
SMARCA1-203ENST00000371123 Q8N377 158 aa5.66□□□□□ -1.5
SMARCA1-203ENST00000371123 Q8NAQ8 132 aa5.65□□□□□ -1.5
SMARCA1-203ENST00000371123 TGP01266 2768 aa5.65□□□□□ -1.5
SMARCA1-203ENST00000371123 VPREB1P12018 145 aa5.65□□□□□ -1.51
SMARCA1-203ENST00000371123 K7EQZ3 153 aa5.65□□□□□ -1.51
SMARCA1-203ENST00000371123 CYP4F30PQ9H0H9 118 aa5.63□□□□□ -1.51
SMARCA1-203ENST00000371123 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
SMARCA1-203ENST00000371123 EGFEM1PQ0D2K5 195 aa5.62□□□□□ -1.51
SMARCA1-203ENST00000371123 MP68P56378 58 aa5.62□□□□□ -1.51
SMARCA1-203ENST00000371123 A6NN06 94 aa5.62□□□□□ -1.51
SMARCA1-203ENST00000371123 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
SMARCA1-203ENST00000371123 TNP2Q05952 138 aa5.61□□□□□ -1.51
SMARCA1-203ENST00000371123 PHF5AQ7RTV0 110 aaKnown RBP5.6□□□□□ -1.51
SMARCA1-203ENST00000371123 IGLV5-48A0A075B6I7 105 aa5.6□□□□□ -1.51
SMARCA1-203ENST00000371123 KRTAP10-11P60412 298 aa5.6□□□□□ -1.51
SMARCA1-203ENST00000371123 Q9BRP9 147 aa5.59□□□□□ -1.51
SMARCA1-203ENST00000371123 MRPL55Q7Z7F7 128 aaKnown RBP5.59□□□□□ -1.52
SMARCA1-203ENST00000371123 DNAH10OSP0CZ25 163 aa5.58□□□□□ -1.52
SMARCA1-203ENST00000371123 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
SMARCA1-203ENST00000371123 KRTAP26-1Q6PEX3 210 aa5.58□□□□□ -1.52
SMARCA1-203ENST00000371123 KTN1-AS1Q86SY8 53 aa5.58□□□□□ -1.52
SMARCA1-203ENST00000371123 IGHV6-1A0A0B4J1U7 121 aa5.57□□□□□ -1.52
SMARCA1-203ENST00000371123 KRTAP21-3Q3LHN1 58 aa5.57□□□□□ -1.52
SMARCA1-203ENST00000371123 KRTAP24-1Q3LI83 254 aa5.57□□□□□ -1.52
SMARCA1-203ENST00000371123 KRTAP7-1Q8IUC3 87 aa5.57□□□□□ -1.52
SMARCA1-203ENST00000371123 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
SMARCA1-203ENST00000371123 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
SMARCA1-203ENST00000371123 C15orf56Q8N910 161 aa5.57□□□□□ -1.52
SMARCA1-203ENST00000371123 DNAH9Q9NYC9 4486 aa5.56□□□□□ -1.52
SMARCA1-203ENST00000371123 PRR34Q9NV39 138 aa5.56□□□□□ -1.52
SMARCA1-203ENST00000371123 REG3GQ6UW15 175 aa5.56□□□□□ -1.52
SMARCA1-203ENST00000371123 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
SMARCA1-203ENST00000371123 LINC00476Q8WZB0 136 aa5.55□□□□□ -1.52
SMARCA1-203ENST00000371123 HCG22E2RYF7 251 aa5.55□□□□□ -1.52
SMARCA1-203ENST00000371123 NDUFB1O75438 58 aa5.55□□□□□ -1.52
SMARCA1-203ENST00000371123 FLG2Q5D862 2391 aaPredicted RBP5.54□□□□□ -1.52
SMARCA1-203ENST00000371123 LINC01556Q5JQF7 62 aa5.54□□□□□ -1.52
SMARCA1-203ENST00000371123 CIRBP-AS1Q8TBR5 109 aa5.54□□□□□ -1.52
SMARCA1-203ENST00000371123 A6NED7 52 aa5.54□□□□□ -1.52
SMARCA1-203ENST00000371123 CMYA5Q8N3K9 4069 aa5.54□□□□□ -1.52
SMARCA1-203ENST00000371123 SPRR4Q96PI1 79 aa5.53□□□□□ -1.52
SMARCA1-203ENST00000371123 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
SMARCA1-203ENST00000371123 DHRS4-AS1Q9P1J3 65 aa5.53□□□□□ -1.52
SMARCA1-203ENST00000371123 DNAH3Q8TD57 4116 aa5.52□□□□□ -1.53
SMARCA1-203ENST00000371123 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
SMARCA1-203ENST00000371123 H3BQ85 93 aa5.52□□□□□ -1.53
SMARCA1-203ENST00000371123 MOBPQ13875 183 aa5.52□□□□□ -1.53
SMARCA1-203ENST00000371123 CASC2Q6XLA1 102 aa5.52□□□□□ -1.53
SMARCA1-203ENST00000371123 B9D2Q9BPU9 175 aa5.52□□□□□ -1.53
SMARCA1-203ENST00000371123 LY6G6CO95867 125 aa5.51□□□□□ -1.53
SMARCA1-203ENST00000371123 SPINK1P00995 79 aa5.51□□□□□ -1.53
SMARCA1-203ENST00000371123 C9orf163Q8N9P6 203 aa5.51□□□□□ -1.53
SMARCA1-203ENST00000371123 KCNQ1DNQ9H478 68 aa5.51□□□□□ -1.53
SMARCA1-203ENST00000371123 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
SMARCA1-203ENST00000371123 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
SMARCA1-203ENST00000371123 H0Y9P7 68 aa5.5□□□□□ -1.53
SMARCA1-203ENST00000371123 Q8NBF4 154 aa5.5□□□□□ -1.53
SMARCA1-203ENST00000371123 Q6ZRX8 168 aa5.5□□□□□ -1.53
SMARCA1-203ENST00000371123 SPAG11AQ6PDA7 123 aa5.49□□□□□ -1.53
SMARCA1-203ENST00000371123 Q75L30 129 aa5.49□□□□□ -1.53
SMARCA1-203ENST00000371123 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
SMARCA1-203ENST00000371123 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
SMARCA1-203ENST00000371123 DNAH7Q8WXX0 4024 aa5.49□□□□□ -1.53
SMARCA1-203ENST00000371123 LOC101927531A0A1B0GV80 90 aa5.48□□□□□ -1.53
SMARCA1-203ENST00000371123 SPINK7P58062 85 aa5.48□□□□□ -1.53
SMARCA1-203ENST00000371123 C8orf87E5RJ46 101 aa5.46□□□□□ -1.54
SMARCA1-203ENST00000371123 ATP11AUNQ6ZP68 121 aa5.46□□□□□ -1.54
SMARCA1-203ENST00000371123 CNBPP62633 177 aaKnown RBP5.46□□□□□ -1.54
SMARCA1-203ENST00000371123 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
SMARCA1-203ENST00000371123 IGFL1Q6UW32 110 aa5.45□□□□□ -1.54
SMARCA1-203ENST00000371123 FBN3Q75N90 2809 aa5.45□□□□□ -1.54
SMARCA1-203ENST00000371123 SPRR1AP35321 89 aa5.44□□□□□ -1.54
SMARCA1-203ENST00000371123 C4orf48Q5BLP8 95 aa5.44□□□□□ -1.54
SMARCA1-203ENST00000371123 COA5Q86WW8 74 aa5.44□□□□□ -1.54
SMARCA1-203ENST00000371123 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
SMARCA1-203ENST00000371123 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
SMARCA1-203ENST00000371123 SPANXA2-OT1Q8N9U9 137 aa5.42□□□□□ -1.54
SMARCA1-203ENST00000371123 MDFIQ99750 246 aa5.42□□□□□ -1.54
SMARCA1-203ENST00000371123 LIMD2Q9BT23 127 aa5.42□□□□□ -1.54
SMARCA1-203ENST00000371123 K7EIL1 84 aa5.42□□□□□ -1.54
SMARCA1-203ENST00000371123 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
SMARCA1-203ENST00000371123 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.55
SMARCA1-203ENST00000371123 IGKV2D-30A0A075B6S6 120 aa5.4□□□□□ -1.55
SMARCA1-203ENST00000371123 IGKV2-30P06310 120 aa5.4□□□□□ -1.55
SMARCA1-203ENST00000371123 KRTAP1-5Q9BYS1 174 aa5.39□□□□□ -1.55
SMARCA1-203ENST00000371123 LINC00313P59037 77 aa5.39□□□□□ -1.55
SMARCA1-203ENST00000371123 KRTAP11-1Q8IUC1 163 aa5.38□□□□□ -1.55
SMARCA1-203ENST00000371123 IGLV7-46A0A075B6I9 117 aa5.38□□□□□ -1.55
SMARCA1-203ENST00000371123 SPACA4Q8TDM5 124 aa5.38□□□□□ -1.55
SMARCA1-203ENST00000371123 A0A1B0GW54 56 aa5.37□□□□□ -1.55
SMARCA1-203ENST00000371123 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
SMARCA1-203ENST00000371123 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
SMARCA1-203ENST00000371123 HRES1P13985 223 aa5.35□□□□□ -1.55
SMARCA1-203ENST00000371123 IGLV5-52A0A0A0MRZ9 124 aa5.35□□□□□ -1.55
SMARCA1-203ENST00000371123 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
SMARCA1-203ENST00000371123 MMP24-AS1A0A0U1RRL7 71 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms