RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 IGLV8-61A0A075B6I0 122 aa7.45□□□□□ -1.22
DEPDC1-201ENST00000370966 CDH23Q9H251 3354 aa7.44□□□□□ -1.22
DEPDC1-201ENST00000370966 VCANP13611 3396 aa7.44□□□□□ -1.22
DEPDC1-201ENST00000370966 OXTP01178 125 aa7.44□□□□□ -1.22
DEPDC1-201ENST00000370966 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
DEPDC1-201ENST00000370966 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
DEPDC1-201ENST00000370966 LCA10Q71F78 164 aa7.42□□□□□ -1.22
DEPDC1-201ENST00000370966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
DEPDC1-201ENST00000370966 FLNCQ14315 2725 aa7.39□□□□□ -1.23
DEPDC1-201ENST00000370966 TNP2Q05952 138 aa7.39□□□□□ -1.23
DEPDC1-201ENST00000370966 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
DEPDC1-201ENST00000370966 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
DEPDC1-201ENST00000370966 KRTAP26-1Q6PEX3 210 aa7.38□□□□□ -1.23
DEPDC1-201ENST00000370966 SPRR1BP22528 89 aa7.37□□□□□ -1.23
DEPDC1-201ENST00000370966 DNAH14Q0VDD8 3507 aa7.37□□□□□ -1.23
DEPDC1-201ENST00000370966 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
DEPDC1-201ENST00000370966 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
DEPDC1-201ENST00000370966 PLAC8Q9NZF1 115 aa7.35□□□□□ -1.23
DEPDC1-201ENST00000370966 Q1T7F1 81 aa7.34□□□□□ -1.23
DEPDC1-201ENST00000370966 FAM229BQ4G0N7 80 aa7.34□□□□□ -1.23
DEPDC1-201ENST00000370966 IGLV7-46A0A075B6I9 117 aa7.33□□□□□ -1.24
DEPDC1-201ENST00000370966 ITPR1Q14643 2758 aa7.32□□□□□ -1.24
DEPDC1-201ENST00000370966 H3BS24 57 aa7.31□□□□□ -1.24
DEPDC1-201ENST00000370966 LAMA1P25391 3075 aa7.31□□□□□ -1.24
DEPDC1-201ENST00000370966 NBEAQ8NFP9 2946 aa7.31□□□□□ -1.24
DEPDC1-201ENST00000370966 NSD1Q96L73 2696 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1-201ENST00000370966 MMP24-AS1A0A0U1RRL7 71 aa7.3□□□□□ -1.24
DEPDC1-201ENST00000370966 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
DEPDC1-201ENST00000370966 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
DEPDC1-201ENST00000370966 ATMQ13315 3056 aa7.29□□□□□ -1.24
DEPDC1-201ENST00000370966 J3QL48 77 aa7.28□□□□□ -1.24
DEPDC1-201ENST00000370966 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
DEPDC1-201ENST00000370966 KALRNO60229 2985 aa7.28□□□□□ -1.24
DEPDC1-201ENST00000370966 CELSR3Q9NYQ7 3312 aa7.28□□□□□ -1.24
DEPDC1-201ENST00000370966 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
DEPDC1-201ENST00000370966 SPEGQ15772 3267 aa7.27□□□□□ -1.25
DEPDC1-201ENST00000370966 ADGRG4Q8IZF6 3080 aa7.27□□□□□ -1.25
DEPDC1-201ENST00000370966 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
DEPDC1-201ENST00000370966 FRYLO94915 3013 aa7.26□□□□□ -1.25
DEPDC1-201ENST00000370966 ITPR2Q14571 2701 aa7.26□□□□□ -1.25
DEPDC1-201ENST00000370966 MYO15AQ9UKN7 3530 aa7.26□□□□□ -1.25
DEPDC1-201ENST00000370966 TACC2O95359 2948 aa7.25□□□□□ -1.25
DEPDC1-201ENST00000370966 Q8N1X5 172 aa7.25□□□□□ -1.25
DEPDC1-201ENST00000370966 BAHCC1Q9P281 2608 aa7.24□□□□□ -1.25
DEPDC1-201ENST00000370966 COL12A1Q99715 3063 aa7.24□□□□□ -1.25
DEPDC1-201ENST00000370966 SZT2Q5T011 3432 aa7.24□□□□□ -1.25
DEPDC1-201ENST00000370966 HRES1P13985 223 aa7.23□□□□□ -1.25
DEPDC1-201ENST00000370966 FREM2Q5SZK8 3169 aa7.22□□□□□ -1.25
DEPDC1-201ENST00000370966 KRTAP4-16G5E9R7 235 aaPredicted RBP7.22□□□□□ -1.25
DEPDC1-201ENST00000370966 COX6B2Q6YFQ2 88 aa7.19□□□□□ -1.26
DEPDC1-201ENST00000370966 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
DEPDC1-201ENST00000370966 BOD1L1Q8NFC6 3051 aa7.18□□□□□ -1.26
DEPDC1-201ENST00000370966 LINC01554Q52M75 96 aa7.17□□□□□ -1.26
DEPDC1-201ENST00000370966 Q75L30 129 aa7.17□□□□□ -1.26
DEPDC1-201ENST00000370966 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
DEPDC1-201ENST00000370966 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
DEPDC1-201ENST00000370966 DMXL2Q8TDJ6 3036 aa7.16□□□□□ -1.26
DEPDC1-201ENST00000370966 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
DEPDC1-201ENST00000370966 EYSQ5T1H1 3165 aa7.15□□□□□ -1.26
DEPDC1-201ENST00000370966 ZCCHC13Q8WW36 166 aaKnown RBP7.15□□□□□ -1.27
DEPDC1-201ENST00000370966 FLG2Q5D862 2391 aaPredicted RBP7.14□□□□□ -1.27
DEPDC1-201ENST00000370966 Q5VV11 94 aa7.14□□□□□ -1.27
DEPDC1-201ENST00000370966 PRAC1Q96KF2 57 aa7.14□□□□□ -1.27
DEPDC1-201ENST00000370966 LINC00483Q53H64 154 aa7.13□□□□□ -1.27
DEPDC1-201ENST00000370966 NIPBLQ6KC79 2804 aaeCLIP7.13□□□□□ -1.27
DEPDC1-201ENST00000370966 UTP20O75691 2785 aaKnown RBP7.12□□□□□ -1.27
DEPDC1-201ENST00000370966 Q5W150 140 aa7.12□□□□□ -1.27
DEPDC1-201ENST00000370966 ZZEF1O43149 2961 aa7.11□□□□□ -1.27
DEPDC1-201ENST00000370966 LRBAP50851 2863 aa7.11□□□□□ -1.27
DEPDC1-201ENST00000370966 KMT2BQ9UMN6 2715 aaPredicted RBP7.1□□□□□ -1.27
DEPDC1-201ENST00000370966 HIVEP1P15822 2718 aa7.09□□□□□ -1.27
DEPDC1-201ENST00000370966 A0A1B0GU33 70 aa7.08□□□□□ -1.28
DEPDC1-201ENST00000370966 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
DEPDC1-201ENST00000370966 Q6ZR54 194 aa7.07□□□□□ -1.28
DEPDC1-201ENST00000370966 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
DEPDC1-201ENST00000370966 Q6ZSA8 131 aa7.07□□□□□ -1.28
DEPDC1-201ENST00000370966 ASH1LQ9NR48 2969 aaKnown RBP7.06□□□□□ -1.28
DEPDC1-201ENST00000370966 PANO1I0J062 215 aa7.06□□□□□ -1.28
DEPDC1-201ENST00000370966 A0A0D9SG42 100 aa7.05□□□□□ -1.28
DEPDC1-201ENST00000370966 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
DEPDC1-201ENST00000370966 APCP25054 2843 aa7.04□□□□□ -1.28
DEPDC1-201ENST00000370966 KRTAP10-2P60368 255 aa7.04□□□□□ -1.28
DEPDC1-201ENST00000370966 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
DEPDC1-201ENST00000370966 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.29
DEPDC1-201ENST00000370966 CELSR2Q9HCU4 2923 aa7.01□□□□□ -1.29
DEPDC1-201ENST00000370966 SPINK7P58062 85 aa7.01□□□□□ -1.29
DEPDC1-201ENST00000370966 COL6A3P12111 3177 aa7□□□□□ -1.29
DEPDC1-201ENST00000370966 WDFY3Q8IZQ1 3526 aa7□□□□□ -1.29
DEPDC1-201ENST00000370966 REV3LO60673 3130 aa7□□□□□ -1.29
DEPDC1-201ENST00000370966 LCE6AA0A183 80 aa6.99□□□□□ -1.29
DEPDC1-201ENST00000370966 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
DEPDC1-201ENST00000370966 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
DEPDC1-201ENST00000370966 CFAP47Q6ZTR5 3102 aa6.97□□□□□ -1.29
DEPDC1-201ENST00000370966 KRTAP7-1Q8IUC3 87 aa6.96□□□□□ -1.29
DEPDC1-201ENST00000370966 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
DEPDC1-201ENST00000370966 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
DEPDC1-201ENST00000370966 KRTAP11-1Q8IUC1 163 aa6.93□□□□□ -1.3
DEPDC1-201ENST00000370966 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
DEPDC1-201ENST00000370966 A0A087X002 238 aa6.92□□□□□ -1.3
DEPDC1-201ENST00000370966 DCHS2Q6V1P9 2916 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms