RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 LINC00588Q9Y4M8 146 aa11.01□□□□□ -0.65
CHUK-201ENST00000370397 TENM2Q9NT68 2774 aa11.01□□□□□ -0.65
CHUK-201ENST00000370397 C1orf195Q5TG92 126 aa11□□□□□ -0.65
CHUK-201ENST00000370397 REG3GQ6UW15 175 aa11□□□□□ -0.65
CHUK-201ENST00000370397 TRAV22A0A0B4J277 110 aa11□□□□□ -0.65
CHUK-201ENST00000370397 DEFB116Q30KQ4 102 aa10.98□□□□□ -0.65
CHUK-201ENST00000370397 UBE2BP63146 152 aa10.97□□□□□ -0.65
CHUK-201ENST00000370397 DYNC2H1Q8NCM8 4307 aaKnown RBP10.96□□□□□ -0.65
CHUK-201ENST00000370397 FBN1P35555 2871 aaKnown RBP10.96□□□□□ -0.66
CHUK-201ENST00000370397 C11orf45Q8TAV5 145 aa10.96□□□□□ -0.66
CHUK-201ENST00000370397 PRR4Q16378 134 aa10.94□□□□□ -0.66
CHUK-201ENST00000370397 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
CHUK-201ENST00000370397 KRTAP11-1Q8IUC1 163 aa10.92□□□□□ -0.66
CHUK-201ENST00000370397 A0A087WSZ3 146 aa10.92□□□□□ -0.66
CHUK-201ENST00000370397 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
CHUK-201ENST00000370397 PSPHP1O15172 72 aa10.91□□□□□ -0.66
CHUK-201ENST00000370397 WFDC13Q8IUB5 93 aa10.91□□□□□ -0.66
CHUK-201ENST00000370397 NDUFB1O75438 58 aa10.91□□□□□ -0.66
CHUK-201ENST00000370397 PRLHP81277 87 aa10.91□□□□□ -0.66
CHUK-201ENST00000370397 A8MU10 97 aa10.89□□□□□ -0.67
CHUK-201ENST00000370397 SPANXA2-OT1Q8N9U9 137 aa10.89□□□□□ -0.67
CHUK-201ENST00000370397 C9orf163Q8N9P6 203 aa10.89□□□□□ -0.67
CHUK-201ENST00000370397 LINC00472Q9H8W2 130 aa10.89□□□□□ -0.67
CHUK-201ENST00000370397 A0A096LNI7 61 aa10.89□□□□□ -0.67
CHUK-201ENST00000370397 Q5VV11 94 aa10.89□□□□□ -0.67
CHUK-201ENST00000370397 SPRR1BP22528 89 aa10.86□□□□□ -0.67
CHUK-201ENST00000370397 B9D2Q9BPU9 175 aa10.86□□□□□ -0.67
CHUK-201ENST00000370397 A8MUN3 132 aa10.86□□□□□ -0.67
CHUK-201ENST00000370397 LINC00208Q96KT6 92 aa10.85□□□□□ -0.67
CHUK-201ENST00000370397 COL7A1Q02388 2944 aa10.84□□□□□ -0.67
CHUK-201ENST00000370397 C16orf90A8MZG2 172 aa10.84□□□□□ -0.67
CHUK-201ENST00000370397 V9GYY9 64 aa10.84□□□□□ -0.67
CHUK-201ENST00000370397 KRTAP1-5Q9BYS1 174 aa10.84□□□□□ -0.67
CHUK-201ENST00000370397 Q8N9P0 234 aaPredicted RBP10.83□□□□□ -0.68
CHUK-201ENST00000370397 FRAS1Q86XX4 4008 aa10.83□□□□□ -0.68
CHUK-201ENST00000370397 MP68P56378 58 aa10.82□□□□□ -0.68
CHUK-201ENST00000370397 H3BPC8 53 aa10.82□□□□□ -0.68
CHUK-201ENST00000370397 A8MWP4 228 aa10.81□□□□□ -0.68
CHUK-201ENST00000370397 H0Y9P7 68 aa10.81□□□□□ -0.68
CHUK-201ENST00000370397 CASC2Q6XLA1 102 aa10.8□□□□□ -0.68
CHUK-201ENST00000370397 ASB16-AS1Q495Z4 193 aa10.79□□□□□ -0.68
CHUK-201ENST00000370397 H0Y9J4 135 aa10.79□□□□□ -0.68
CHUK-201ENST00000370397 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
CHUK-201ENST00000370397 STAB1Q9NY15 2570 aa10.77□□□□□ -0.68
CHUK-201ENST00000370397 HECTD4Q9Y4D8 3996 aa10.77□□□□□ -0.69
CHUK-201ENST00000370397 PRB2P02812 416 aaPredicted RBP10.76□□□□□ -0.69
CHUK-201ENST00000370397 DNAH8Q96JB1 4490 aa10.76□□□□□ -0.69
CHUK-201ENST00000370397 MDFIQ99750 246 aa10.76□□□□□ -0.69
CHUK-201ENST00000370397 PLECQ15149 4684 aaKnown RBP10.76□□□□□ -0.69
CHUK-201ENST00000370397 UBE2AP49459 152 aa10.75□□□□□ -0.69
CHUK-201ENST00000370397 PMAIP1Q13794 54 aa10.75□□□□□ -0.69
CHUK-201ENST00000370397 Q96NJ1 140 aa10.75□□□□□ -0.69
CHUK-201ENST00000370397 IGKV2-24A0A0C4DH68 120 aa10.74□□□□□ -0.69
CHUK-201ENST00000370397 SEC61GP60059 68 aa10.74□□□□□ -0.69
CHUK-201ENST00000370397 NBEAL1Q6ZS30 2694 aa10.74□□□□□ -0.69
CHUK-201ENST00000370397 NOTCH1P46531 2555 aa10.73□□□□□ -0.69
CHUK-201ENST00000370397 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
CHUK-201ENST00000370397 PHF5AQ7RTV0 110 aaKnown RBP10.73□□□□□ -0.69
CHUK-201ENST00000370397 IGLV7-46A0A075B6I9 117 aa10.71□□□□□ -0.7
CHUK-201ENST00000370397 CHTF8P0CG12 524 aa10.7□□□□□ -0.7
CHUK-201ENST00000370397 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
CHUK-201ENST00000370397 LOC101927531A0A1B0GV80 90 aa10.69□□□□□ -0.7
CHUK-201ENST00000370397 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
CHUK-201ENST00000370397 LIMD2Q9BT23 127 aa10.69□□□□□ -0.7
CHUK-201ENST00000370397 ALMS1Q8TCU4 4167 aa10.68□□□□□ -0.7
CHUK-201ENST00000370397 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
CHUK-201ENST00000370397 LCA10Q71F78 164 aa10.67□□□□□ -0.7
CHUK-201ENST00000370397 Q75L30 129 aa10.66□□□□□ -0.7
CHUK-201ENST00000370397 COA5Q86WW8 74 aa10.65□□□□□ -0.7
CHUK-201ENST00000370397 CD164Q04900 197 aa10.65□□□□□ -0.71
CHUK-201ENST00000370397 Q6ZR54 194 aa10.64□□□□□ -0.71
CHUK-201ENST00000370397 PANO1I0J062 215 aa10.63□□□□□ -0.71
CHUK-201ENST00000370397 PRR15LQ9BU68 103 aa10.61□□□□□ -0.71
CHUK-201ENST00000370397 VPS13DQ5THJ4 4388 aa10.6□□□□□ -0.71
CHUK-201ENST00000370397 CHKB-CPT1BH3BT56 60 aa10.6□□□□□ -0.71
CHUK-201ENST00000370397 PRKDCP78527 4128 aaKnown RBP10.6□□□□□ -0.71
CHUK-201ENST00000370397 DNAH17Q9UFH2 4485 aa10.59□□□□□ -0.71
CHUK-201ENST00000370397 DNAH2Q9P225 4427 aa10.57□□□□□ -0.72
CHUK-201ENST00000370397 STAB2Q8WWQ8 2551 aa10.56□□□□□ -0.72
CHUK-201ENST00000370397 K7EIL1 84 aa10.56□□□□□ -0.72
CHUK-201ENST00000370397 STARD9Q9P2P6 4700 aa10.54□□□□□ -0.72
CHUK-201ENST00000370397 MOBPQ13875 183 aa10.54□□□□□ -0.72
CHUK-201ENST00000370397 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
CHUK-201ENST00000370397 A6NN06 94 aa10.53□□□□□ -0.72
CHUK-201ENST00000370397 TP53AIP1Q9HCN2 124 aa10.53□□□□□ -0.72
CHUK-201ENST00000370397 C8orf17Q9NRJ1 99 aa10.53□□□□□ -0.72
CHUK-201ENST00000370397 LINC01558Q9Y6Z2 57 aa10.53□□□□□ -0.72
CHUK-201ENST00000370397 PCOTHQ58A44 107 aa10.51□□□□□ -0.73
CHUK-201ENST00000370397 FBN3Q75N90 2809 aa10.51□□□□□ -0.73
CHUK-201ENST00000370397 ATP11AUNQ6ZP68 121 aa10.5□□□□□ -0.73
CHUK-201ENST00000370397 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
CHUK-201ENST00000370397 Q6ZRN7 208 aaPredicted RBP10.49□□□□□ -0.73
CHUK-201ENST00000370397 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
CHUK-201ENST00000370397 A0A087X002 238 aa10.49□□□□□ -0.73
CHUK-201ENST00000370397 HRES1P13985 223 aa10.49□□□□□ -0.73
CHUK-201ENST00000370397 NOTCH2NLQ7Z3S9 236 aa10.49□□□□□ -0.73
CHUK-201ENST00000370397 KRTAP13-3Q3SY46 172 aa10.48□□□□□ -0.73
CHUK-201ENST00000370397 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
CHUK-201ENST00000370397 CDC42SE1Q9NRR8 79 aa10.47□□□□□ -0.73
CHUK-201ENST00000370397 C14orf177Q52M58 125 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms