RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 LINC00322Q6ZN03 302 aaPredicted RBP3.5□□□□□ -1.85
LRRC39-202ENST00000370137 WFDC9Q8NEX5 89 aa3.5□□□□□ -1.85
LRRC39-202ENST00000370137 TRGV1A0A0A0MS02 117 aa3.49□□□□□ -1.85
LRRC39-202ENST00000370137 TRAV1-2A0A0B4J238 106 aa3.49□□□□□ -1.85
LRRC39-202ENST00000370137 IGLV6-57P01721 117 aa3.49□□□□□ -1.85
LRRC39-202ENST00000370137 LINC00315P59091 139 aa3.49□□□□□ -1.85
LRRC39-202ENST00000370137 Q96NJ1 140 aa3.49□□□□□ -1.85
LRRC39-202ENST00000370137 CACNA1CQ13936 2221 aa3.49□□□□□ -1.85
LRRC39-202ENST00000370137 NCOA6Q14686 2063 aaPredicted RBP3.48□□□□□ -1.85
LRRC39-202ENST00000370137 ALPK2Q86TB3 2170 aa3.48□□□□□ -1.85
LRRC39-202ENST00000370137 NOTCH3Q9UM47 2321 aa3.48□□□□□ -1.85
LRRC39-202ENST00000370137 K7EMI3 77 aa3.48□□□□□ -1.85
LRRC39-202ENST00000370137 IGKV4-1P06312 121 aa3.48□□□□□ -1.85
LRRC39-202ENST00000370137 COX17Q14061 63 aa3.48□□□□□ -1.85
LRRC39-202ENST00000370137 ENHOQ6UWT2 76 aa3.48□□□□□ -1.85
LRRC39-202ENST00000370137 TRGV2A0A075B6R0 118 aa3.47□□□□□ -1.85
LRRC39-202ENST00000370137 PRRC2AP48634 2157 aaKnown RBP3.47□□□□□ -1.85
LRRC39-202ENST00000370137 FREM1Q5H8C1 2179 aa3.47□□□□□ -1.85
LRRC39-202ENST00000370137 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
LRRC39-202ENST00000370137 ABRACLQ9P1F3 81 aa3.46□□□□□ -1.86
LRRC39-202ENST00000370137 TENM1Q9UKZ4 2725 aa3.45□□□□□ -1.86
LRRC39-202ENST00000370137 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
LRRC39-202ENST00000370137 TRBV6-1A0A0K0K1D8 114 aa3.45□□□□□ -1.86
LRRC39-202ENST00000370137 LINC00472Q9H8W2 130 aa3.45□□□□□ -1.86
LRRC39-202ENST00000370137 AKAP6Q13023 2319 aa3.45□□□□□ -1.86
LRRC39-202ENST00000370137 SONP18583 2426 aaKnown RBP3.45□□□□□ -1.86
LRRC39-202ENST00000370137 INE1O15225 51 aa3.44□□□□□ -1.86
LRRC39-202ENST00000370137 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
LRRC39-202ENST00000370137 GAFA1Q96PS6 74 aa3.44□□□□□ -1.86
LRRC39-202ENST00000370137 UBL5Q9BZL1 73 aa3.44□□□□□ -1.86
LRRC39-202ENST00000370137 TRRAPQ9Y4A5 3859 aa3.44□□□□□ -1.86
LRRC39-202ENST00000370137 LCE6AA0A183 80 aa3.43□□□□□ -1.86
LRRC39-202ENST00000370137 ACYP2P14621 99 aa3.42□□□□□ -1.86
LRRC39-202ENST00000370137 DEFB112Q30KQ8 113 aa3.42□□□□□ -1.86
LRRC39-202ENST00000370137 ZCCHC13Q8WW36 166 aaKnown RBP3.42□□□□□ -1.86
LRRC39-202ENST00000370137 SPINK14Q6IE38 97 aa3.41□□□□□ -1.86
LRRC39-202ENST00000370137 COA5Q86WW8 74 aa3.41□□□□□ -1.86
LRRC39-202ENST00000370137 ZNF625Q96I27 306 aaPredicted RBP3.41□□□□□ -1.86
LRRC39-202ENST00000370137 TXNDC17Q9BRA2 123 aa3.41□□□□□ -1.86
LRRC39-202ENST00000370137 CNTRLQ7Z7A1 2325 aa3.41□□□□□ -1.86
LRRC39-202ENST00000370137 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.86
LRRC39-202ENST00000370137 CMYA5Q8N3K9 4069 aa3.4□□□□□ -1.86
LRRC39-202ENST00000370137 IGKV2-28A0A075B6P5 120 aa3.4□□□□□ -1.86
LRRC39-202ENST00000370137 M0R2N4 97 aa3.4□□□□□ -1.86
LRRC39-202ENST00000370137 IGKV2D-28P01615 120 aa3.4□□□□□ -1.86
LRRC39-202ENST00000370137 OBSCN-AS1Q96MR7 158 aa3.39□□□□□ -1.87
LRRC39-202ENST00000370137 U3KQA8 63 aa3.39□□□□□ -1.87
LRRC39-202ENST00000370137 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
LRRC39-202ENST00000370137 ANAPC11Q9NYG5 84 aa3.38□□□□□ -1.87
LRRC39-202ENST00000370137 HIVEP2P31629 2446 aa3.37□□□□□ -1.87
LRRC39-202ENST00000370137 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
LRRC39-202ENST00000370137 SMIM27A0A1W2PRY6 76 aa3.37□□□□□ -1.87
LRRC39-202ENST00000370137 PRR9Q5T870 116 aa3.37□□□□□ -1.87
LRRC39-202ENST00000370137 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
LRRC39-202ENST00000370137 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
LRRC39-202ENST00000370137 IGKV2-24A0A0C4DH68 120 aa3.36□□□□□ -1.87
LRRC39-202ENST00000370137 LINC00959A0A1B0GUT2 108 aa3.36□□□□□ -1.87
LRRC39-202ENST00000370137 CAV3P56539 151 aa3.36□□□□□ -1.87
LRRC39-202ENST00000370137 VWFP04275 2813 aa3.36□□□□□ -1.87
LRRC39-202ENST00000370137 WNK1Q9H4A3 2382 aa3.36□□□□□ -1.87
LRRC39-202ENST00000370137 RYR1P21817 5038 aa3.36□□□□□ -1.87
LRRC39-202ENST00000370137 A0A1B0GU69 56 aa3.35□□□□□ -1.87
LRRC39-202ENST00000370137 PLNP26678 52 aa3.35□□□□□ -1.87
LRRC39-202ENST00000370137 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.88
LRRC39-202ENST00000370137 DEFB109BQ30KR1 87 aa3.34□□□□□ -1.88
LRRC39-202ENST00000370137 Q6ZQY7 126 aa3.34□□□□□ -1.88
LRRC39-202ENST00000370137 CCL19Q99731 98 aa3.34□□□□□ -1.88
LRRC39-202ENST00000370137 SMR3AQ99954 134 aa3.34□□□□□ -1.88
LRRC39-202ENST00000370137 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.34□□□□□ -1.88
LRRC39-202ENST00000370137 M0R1W7 72 aa3.33□□□□□ -1.88
LRRC39-202ENST00000370137 NDUFA4O00483 81 aa3.33□□□□□ -1.88
LRRC39-202ENST00000370137 COX6B1P14854 86 aa3.33□□□□□ -1.88
LRRC39-202ENST00000370137 Q6ZRN7 208 aaPredicted RBP3.33□□□□□ -1.88
LRRC39-202ENST00000370137 HYDINQ4G0P3 5121 aa3.32□□□□□ -1.88
LRRC39-202ENST00000370137 KRTAP1-4P0C5Y4 121 aa3.31□□□□□ -1.88
LRRC39-202ENST00000370137 KRTAP10-8P60410 259 aa3.31□□□□□ -1.88
LRRC39-202ENST00000370137 SERF2P84101 59 aa3.31□□□□□ -1.88
LRRC39-202ENST00000370137 DEFB133Q30KQ1 61 aa3.31□□□□□ -1.88
LRRC39-202ENST00000370137 ARL14EPLP0DKL9 152 aa3.3□□□□□ -1.88
LRRC39-202ENST00000370137 DYNC2H1Q8NCM8 4307 aaKnown RBP3.29□□□□□ -1.88
LRRC39-202ENST00000370137 RYR2Q92736 4967 aa3.28□□□□□ -1.88
LRRC39-202ENST00000370137 I3L3M4 83 aa3.28□□□□□ -1.88
LRRC39-202ENST00000370137 COX7BP24311 80 aa3.28□□□□□ -1.88
LRRC39-202ENST00000370137 COL7A1Q02388 2944 aa3.28□□□□□ -1.88
LRRC39-202ENST00000370137 TENM3Q9P273 2699 aa3.28□□□□□ -1.89
LRRC39-202ENST00000370137 IGIPA6NJ69 53 aa3.27□□□□□ -1.89
LRRC39-202ENST00000370137 HAMPP81172 84 aa3.27□□□□□ -1.89
LRRC39-202ENST00000370137 TIMM8BQ9Y5J9 83 aaPredicted RBP3.27□□□□□ -1.89
LRRC39-202ENST00000370137 ABCA1O95477 2261 aa3.27□□□□□ -1.89
LRRC39-202ENST00000370137 A0A1B0GVY2 172 aa3.26□□□□□ -1.89
LRRC39-202ENST00000370137 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.26□□□□□ -1.89
LRRC39-202ENST00000370137 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
LRRC39-202ENST00000370137 NCR3O14931 201 aa3.25□□□□□ -1.89
LRRC39-202ENST00000370137 SPINK4O60575 86 aa3.25□□□□□ -1.89
LRRC39-202ENST00000370137 Q6ZRX8 168 aa3.25□□□□□ -1.89
LRRC39-202ENST00000370137 USF3Q68DE3 2245 aa3.25□□□□□ -1.89
LRRC39-202ENST00000370137 SPTY2D1-AS1A0A0U1RR47 76 aa3.25□□□□□ -1.89
LRRC39-202ENST00000370137 SNRPGP62308 76 aaKnown RBP3.25□□□□□ -1.89
LRRC39-202ENST00000370137 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
LRRC39-202ENST00000370137 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms