RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CELSR3Q9NYQ7 3312 aa7.88□□□□□ -1.15
PTPRK-207ENST00000368226 TEP1Q99973 2627 aaKnown RBP7.88□□□□□ -1.15
PTPRK-207ENST00000368226 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
PTPRK-207ENST00000368226 TRANK1O15050 2925 aa7.87□□□□□ -1.15
PTPRK-207ENST00000368226 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-207ENST00000368226 AKAP13Q12802 2813 aa7.87□□□□□ -1.15
PTPRK-207ENST00000368226 KRTAP10-1P60331 282 aa7.87□□□□□ -1.15
PTPRK-207ENST00000368226 TEX15Q9BXT5 2789 aa7.84□□□□□ -1.15
PTPRK-207ENST00000368226 MMP24-AS1A0A0U1RRL7 71 aa7.84□□□□□ -1.15
PTPRK-207ENST00000368226 FAM229BQ4G0N7 80 aa7.84□□□□□ -1.15
PTPRK-207ENST00000368226 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
PTPRK-207ENST00000368226 CHD6Q8TD26 2715 aa7.84□□□□□ -1.16
PTPRK-207ENST00000368226 ZCCHC13Q8WW36 166 aaKnown RBP7.83□□□□□ -1.16
PTPRK-207ENST00000368226 SPRR1AP35321 89 aa7.81□□□□□ -1.16
PTPRK-207ENST00000368226 S4R3F8 94 aa7.79□□□□□ -1.16
PTPRK-207ENST00000368226 DNAH14Q0VDD8 3507 aa7.79□□□□□ -1.16
PTPRK-207ENST00000368226 SZT2Q5T011 3432 aa7.78□□□□□ -1.16
PTPRK-207ENST00000368226 LCE6AA0A183 80 aa7.78□□□□□ -1.16
PTPRK-207ENST00000368226 A0A1B0GU33 70 aa7.78□□□□□ -1.16
PTPRK-207ENST00000368226 PANO1I0J062 215 aa7.78□□□□□ -1.16
PTPRK-207ENST00000368226 KRTAP26-1Q6PEX3 210 aa7.77□□□□□ -1.17
PTPRK-207ENST00000368226 Q5W150 140 aa7.76□□□□□ -1.17
PTPRK-207ENST00000368226 DSPP15924 2871 aaKnown RBP7.76□□□□□ -1.17
PTPRK-207ENST00000368226 VPS13AQ96RL7 3174 aa7.76□□□□□ -1.17
PTPRK-207ENST00000368226 ZNF292O60281 2723 aa7.75□□□□□ -1.17
PTPRK-207ENST00000368226 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
PTPRK-207ENST00000368226 SPINK7P58062 85 aa7.74□□□□□ -1.17
PTPRK-207ENST00000368226 LINC00472Q9H8W2 130 aa7.72□□□□□ -1.17
PTPRK-207ENST00000368226 FREM2Q5SZK8 3169 aa7.72□□□□□ -1.17
PTPRK-207ENST00000368226 SETXQ7Z333 2677 aaKnown RBP7.72□□□□□ -1.17
PTPRK-207ENST00000368226 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
PTPRK-207ENST00000368226 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.18
PTPRK-207ENST00000368226 STAB1Q9NY15 2570 aa7.7□□□□□ -1.18
PTPRK-207ENST00000368226 VCANP13611 3396 aa7.7□□□□□ -1.18
PTPRK-207ENST00000368226 Q1T7F1 81 aa7.68□□□□□ -1.18
PTPRK-207ENST00000368226 LCA10Q71F78 164 aa7.68□□□□□ -1.18
PTPRK-207ENST00000368226 MAP1AP78559 2803 aaPredicted RBP7.67□□□□□ -1.18
PTPRK-207ENST00000368226 SPRR1BP22528 89 aa7.67□□□□□ -1.18
PTPRK-207ENST00000368226 FRYQ5TBA9 3013 aa7.67□□□□□ -1.18
PTPRK-207ENST00000368226 GCN1Q92616 2671 aaKnown RBP7.66□□□□□ -1.18
PTPRK-207ENST00000368226 COL6A5A8TX70 2615 aa7.66□□□□□ -1.18
PTPRK-207ENST00000368226 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
PTPRK-207ENST00000368226 R4GN34 69 aa7.63□□□□□ -1.19
PTPRK-207ENST00000368226 A0A087X002 238 aa7.62□□□□□ -1.19
PTPRK-207ENST00000368226 NBEAL1Q6ZS30 2694 aa7.62□□□□□ -1.19
PTPRK-207ENST00000368226 COL6A3P12111 3177 aa7.62□□□□□ -1.19
PTPRK-207ENST00000368226 IGSF10Q6WRI0 2623 aa7.62□□□□□ -1.19
PTPRK-207ENST00000368226 BAHCC1Q9P281 2608 aa7.61□□□□□ -1.19
PTPRK-207ENST00000368226 NBEAL2Q6ZNJ1 2754 aa7.6□□□□□ -1.19
PTPRK-207ENST00000368226 Q75L30 129 aa7.6□□□□□ -1.19
PTPRK-207ENST00000368226 LAMA1P25391 3075 aa7.59□□□□□ -1.19
PTPRK-207ENST00000368226 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
PTPRK-207ENST00000368226 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
PTPRK-207ENST00000368226 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
PTPRK-207ENST00000368226 LUZP6Q538Z0 58 aa7.58□□□□□ -1.2
PTPRK-207ENST00000368226 Q6ZR54 194 aa7.58□□□□□ -1.2
PTPRK-207ENST00000368226 LINC00483Q53H64 154 aa7.57□□□□□ -1.2
PTPRK-207ENST00000368226 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
PTPRK-207ENST00000368226 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
PTPRK-207ENST00000368226 KRTAP11-1Q8IUC1 163 aa7.56□□□□□ -1.2
PTPRK-207ENST00000368226 M0QZ58 72 aa7.53□□□□□ -1.2
PTPRK-207ENST00000368226 FP248Q71RG6 208 aaPredicted RBP7.53□□□□□ -1.2
PTPRK-207ENST00000368226 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.2
PTPRK-207ENST00000368226 Q5XG85 94 aa7.51□□□□□ -1.21
PTPRK-207ENST00000368226 NOTCH2NLQ7Z3S9 236 aa7.51□□□□□ -1.21
PTPRK-207ENST00000368226 Q5VV11 94 aa7.51□□□□□ -1.21
PTPRK-207ENST00000368226 UBR5O95071 2799 aaPredicted RBP7.49□□□□□ -1.21
PTPRK-207ENST00000368226 KALRNO60229 2985 aa7.49□□□□□ -1.21
PTPRK-207ENST00000368226 BOD1L1Q8NFC6 3051 aa7.49□□□□□ -1.21
PTPRK-207ENST00000368226 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
PTPRK-207ENST00000368226 ATMQ13315 3056 aa7.48□□□□□ -1.21
PTPRK-207ENST00000368226 SPATA8Q6RVD6 105 aa7.48□□□□□ -1.21
PTPRK-207ENST00000368226 SPTBN5Q9NRC6 3674 aaKnown RBP7.47□□□□□ -1.21
PTPRK-207ENST00000368226 CFAP47Q6ZTR5 3102 aa7.47□□□□□ -1.21
PTPRK-207ENST00000368226 TACC2O95359 2948 aa7.46□□□□□ -1.22
PTPRK-207ENST00000368226 REV3LO60673 3130 aa7.44□□□□□ -1.22
PTPRK-207ENST00000368226 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
PTPRK-207ENST00000368226 COL12A1Q99715 3063 aa7.42□□□□□ -1.22
PTPRK-207ENST00000368226 ITPR2Q14571 2701 aa7.42□□□□□ -1.22
PTPRK-207ENST00000368226 LRBAP50851 2863 aa7.42□□□□□ -1.22
PTPRK-207ENST00000368226 FRYLO94915 3013 aa7.42□□□□□ -1.22
PTPRK-207ENST00000368226 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
PTPRK-207ENST00000368226 DMXL2Q8TDJ6 3036 aa7.41□□□□□ -1.22
PTPRK-207ENST00000368226 KRTAP7-1Q8IUC3 87 aa7.41□□□□□ -1.22
PTPRK-207ENST00000368226 OXTP01178 125 aa7.4□□□□□ -1.22
PTPRK-207ENST00000368226 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
PTPRK-207ENST00000368226 FLG2Q5D862 2391 aaPredicted RBP7.39□□□□□ -1.23
PTPRK-207ENST00000368226 CRYBG3Q68DQ2 2970 aa7.39□□□□□ -1.23
PTPRK-207ENST00000368226 SPEGQ15772 3267 aa7.38□□□□□ -1.23
PTPRK-207ENST00000368226 ITPR1Q14643 2758 aa7.38□□□□□ -1.23
PTPRK-207ENST00000368226 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
PTPRK-207ENST00000368226 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
PTPRK-207ENST00000368226 ADGRG4Q8IZF6 3080 aa7.35□□□□□ -1.23
PTPRK-207ENST00000368226 KRTAP13-2Q52LG2 175 aa7.34□□□□□ -1.23
PTPRK-207ENST00000368226 ROMO1P60602 79 aa7.33□□□□□ -1.24
PTPRK-207ENST00000368226 EYSQ5T1H1 3165 aa7.33□□□□□ -1.24
PTPRK-207ENST00000368226 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
PTPRK-207ENST00000368226 USP34Q70CQ2 3546 aa7.31□□□□□ -1.24
PTPRK-207ENST00000368226 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
PTPRK-207ENST00000368226 UTP20O75691 2785 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms