RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 H3BUX3 64 aa0.83□□□□□ -2.28
RNU4-42P-201ENST00000364738 SPRR1AP35321 89 aa0.83□□□□□ -2.28
RNU4-42P-201ENST00000364738 DEFB110Q30KQ9 67 aa0.83□□□□□ -2.28
RNU4-42P-201ENST00000364738 RHPN1-AS1Q9BWJ2 59 aa0.83□□□□□ -2.28
RNU4-42P-201ENST00000364738 CACNA1BQ00975 2339 aa0.82□□□□□ -2.28
RNU4-42P-201ENST00000364738 K7EIL1 84 aa0.82□□□□□ -2.28
RNU4-42P-201ENST00000364738 SPRR1BP22528 89 aa0.82□□□□□ -2.28
RNU4-42P-201ENST00000364738 PRLHP81277 87 aa0.82□□□□□ -2.28
RNU4-42P-201ENST00000364738 DEFB119Q8N690 84 aa0.82□□□□□ -2.28
RNU4-42P-201ENST00000364738 C10orf95Q9H7T3 257 aa0.82□□□□□ -2.28
RNU4-42P-201ENST00000364738 TPRP12270 2363 aaKnown RBP0.82□□□□□ -2.28
RNU4-42P-201ENST00000364738 COL6A6A6NMZ7 2263 aa0.81□□□□□ -2.28
RNU4-42P-201ENST00000364738 FN1P02751 2386 aaKnown RBP0.81□□□□□ -2.28
RNU4-42P-201ENST00000364738 HTN1P15515 57 aa0.81□□□□□ -2.28
RNU4-42P-201ENST00000364738 LELP1Q5T871 98 aa0.81□□□□□ -2.28
RNU4-42P-201ENST00000364738 DEFB108BQ8NET1 73 aa0.81□□□□□ -2.28
RNU4-42P-201ENST00000364738 NOP10Q9NPE3 64 aaKnown RBP0.81□□□□□ -2.28
RNU4-42P-201ENST00000364738 APLNQ9ULZ1 77 aa0.8□□□□□ -2.28
RNU4-42P-201ENST00000364738 Q9Y3F1 56 aa0.8□□□□□ -2.28
RNU4-42P-201ENST00000364738 IGF2RP11717 2491 aa0.79□□□□□ -2.28
RNU4-42P-201ENST00000364738 PIEZO2Q9H5I5 2752 aa0.79□□□□□ -2.28
RNU4-42P-201ENST00000364738 WNK2Q9Y3S1 2297 aa0.79□□□□□ -2.28
RNU4-42P-201ENST00000364738 J3QKU1 62 aa0.79□□□□□ -2.28
RNU4-42P-201ENST00000364738 DEFB1P60022 68 aa0.79□□□□□ -2.28
RNU4-42P-201ENST00000364738 ZDBF2Q9HCK1 2354 aa0.79□□□□□ -2.28
RNU4-42P-201ENST00000364738 SPINK1P00995 79 aa0.78□□□□□ -2.28
RNU4-42P-201ENST00000364738 CD52P31358 61 aa0.78□□□□□ -2.28
RNU4-42P-201ENST00000364738 Q5VSD8 79 aa0.78□□□□□ -2.28
RNU4-42P-201ENST00000364738 PRO0255Q9UI72 69 aa0.78□□□□□ -2.28
RNU4-42P-201ENST00000364738 S4R3F8 94 aa0.78□□□□□ -2.28
RNU4-42P-201ENST00000364738 FLG2Q5D862 2391 aaPredicted RBP0.78□□□□□ -2.28
RNU4-42P-201ENST00000364738 WNK1Q9H4A3 2382 aa0.78□□□□□ -2.28
RNU4-42P-201ENST00000364738 PCNX1Q96RV3 2341 aa0.77□□□□□ -2.29
RNU4-42P-201ENST00000364738 FAM208BQ5VWN6 2430 aa0.77□□□□□ -2.29
RNU4-42P-201ENST00000364738 SPTBN1Q01082 2364 aaKnown RBP0.77□□□□□ -2.29
RNU4-42P-201ENST00000364738 AKAP6Q13023 2319 aa0.75□□□□□ -2.29
RNU4-42P-201ENST00000364738 ALMS1Q8TCU4 4167 aa0.75□□□□□ -2.29
RNU4-42P-201ENST00000364738 WDR87Q6ZQQ6 2873 aa0.75□□□□□ -2.29
RNU4-42P-201ENST00000364738 ZNF462Q96JM2 2506 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 PTPRZ1P23471 2315 aaPredicted RBP0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 A0A0D9SG42 100 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 M0QZ58 72 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 KRTAP12-1P59990 96 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 DEFB103AP81534 67 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 DEFB136Q30KP8 78 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 PKDREJQ9NTG1 2253 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 JMJD1CQ15652 2540 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 SPTA1P02549 2419 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 TENM2Q9NT68 2774 aa0.74□□□□□ -2.29
RNU4-42P-201ENST00000364738 H3BNG1 76 aa0.73□□□□□ -2.29
RNU4-42P-201ENST00000364738 ROS1P08922 2347 aa0.73□□□□□ -2.29
RNU4-42P-201ENST00000364738 ACACAQ13085 2346 aa0.73□□□□□ -2.29
RNU4-42P-201ENST00000364738 CHD7Q9P2D1 2997 aa0.73□□□□□ -2.29
RNU4-42P-201ENST00000364738 A0A0C4DFX4 3053 aa0.73□□□□□ -2.29
RNU4-42P-201ENST00000364738 CACNA1GO43497 2377 aa0.72□□□□□ -2.29
RNU4-42P-201ENST00000364738 SPTBN4Q9H254 2564 aa0.72□□□□□ -2.29
RNU4-42P-201ENST00000364738 MGAQ8IWI9 3026 aa0.72□□□□□ -2.29
RNU4-42P-201ENST00000364738 DEFB133Q30KQ1 61 aa0.72□□□□□ -2.29
RNU4-42P-201ENST00000364738 BAHCC1Q9P281 2608 aa0.72□□□□□ -2.29
RNU4-42P-201ENST00000364738 CHD6Q8TD26 2715 aa0.72□□□□□ -2.29
RNU4-42P-201ENST00000364738 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
RNU4-42P-201ENST00000364738 CSPG4Q6UVK1 2322 aa0.71□□□□□ -2.3
RNU4-42P-201ENST00000364738 A0A096LNI7 61 aa0.71□□□□□ -2.3
RNU4-42P-201ENST00000364738 LINC01556Q5JQF7 62 aa0.71□□□□□ -2.3
RNU4-42P-201ENST00000364738 SPINK6Q6UWN8 80 aa0.71□□□□□ -2.3
RNU4-42P-201ENST00000364738 DEFB124Q8NES8 71 aa0.71□□□□□ -2.3
RNU4-42P-201ENST00000364738 DSPP15924 2871 aaKnown RBP0.71□□□□□ -2.3
RNU4-42P-201ENST00000364738 SPTBN2O15020 2390 aa0.7□□□□□ -2.3
RNU4-42P-201ENST00000364738 CACNA1HO95180 2353 aa0.7□□□□□ -2.3
RNU4-42P-201ENST00000364738 MAP1BP46821 2468 aaKnown RBP0.7□□□□□ -2.3
RNU4-42P-201ENST00000364738 A0A096LPF7 62 aa0.7□□□□□ -2.3
RNU4-42P-201ENST00000364738 OTOGQ6ZRI0 2925 aa0.69□□□□□ -2.3
RNU4-42P-201ENST00000364738 SPART-AS1P0CW21 52 aa0.69□□□□□ -2.3
RNU4-42P-201ENST00000364738 UBR5O95071 2799 aaPredicted RBP0.69□□□□□ -2.3
RNU4-42P-201ENST00000364738 ASH1LQ9NR48 2969 aaKnown RBP0.69□□□□□ -2.3
RNU4-42P-201ENST00000364738 ABCA2Q9BZC7 2435 aa0.68□□□□□ -2.3
RNU4-42P-201ENST00000364738 SRRM2Q9UQ35 2752 aaKnown RBP0.68□□□□□ -2.3
RNU4-42P-201ENST00000364738 VWFP04275 2813 aa0.67□□□□□ -2.3
RNU4-42P-201ENST00000364738 F8P00451 2351 aa0.67□□□□□ -2.3
RNU4-42P-201ENST00000364738 COL6A5A8TX70 2615 aa0.67□□□□□ -2.3
RNU4-42P-201ENST00000364738 GVINP1Q7Z2Y8 2422 aa0.67□□□□□ -2.3
RNU4-42P-201ENST00000364738 TRANK1O15050 2925 aa0.67□□□□□ -2.3
RNU4-42P-201ENST00000364738 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
RNU4-42P-201ENST00000364738 CEP290O15078 2479 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 CCDC168Q8NDH2 2452 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 CEP250Q9BV73 2442 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 PRRC2CQ9Y520 2896 aaKnown RBP0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 TNP1P09430 55 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 KRTAP5-10Q6L8G5 202 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 APC2O95996 2303 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 NCOR1O75376 2440 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 REV3LO60673 3130 aa0.66□□□□□ -2.3
RNU4-42P-201ENST00000364738 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.3
RNU4-42P-201ENST00000364738 CEP350Q5VT06 3117 aa0.65□□□□□ -2.3
RNU4-42P-201ENST00000364738 TNRC18O15417 2968 aaPredicted RBP0.65□□□□□ -2.31
RNU4-42P-201ENST00000364738 RPS29P62273 56 aaKnown RBP0.65□□□□□ -2.31
RNU4-42P-201ENST00000364738 U3KQA8 63 aa0.65□□□□□ -2.31
RNU4-42P-201ENST00000364738 PKD1L2Q7Z442 2459 aa0.65□□□□□ -2.31
RNU4-42P-201ENST00000364738 ABCA12Q86UK0 2595 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms