RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
VAMP1-201ENST00000361716 KRTAP24-1Q3LI83 254 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 Q9BRP9 147 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 H0Y9J4 135 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 PRLHP81277 87 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 CASC10Q5T4H9 136 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 IGLV5-48A0A075B6I7 105 aa8.19□□□□□ -1.1
VAMP1-201ENST00000361716 ZCCHC13Q8WW36 166 aaKnown RBP8.18□□□□□ -1.1
VAMP1-201ENST00000361716 LINC00476Q8WZB0 136 aa8.18□□□□□ -1.1
VAMP1-201ENST00000361716 Q6ZRX8 168 aa8.18□□□□□ -1.1
VAMP1-201ENST00000361716 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
VAMP1-201ENST00000361716 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
VAMP1-201ENST00000361716 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
VAMP1-201ENST00000361716 CASC2Q6XLA1 102 aa8.17□□□□□ -1.1
VAMP1-201ENST00000361716 ANK2Q01484 3957 aa8.16□□□□□ -1.1
VAMP1-201ENST00000361716 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
VAMP1-201ENST00000361716 TENM2Q9NT68 2774 aa8.16□□□□□ -1.1
VAMP1-201ENST00000361716 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
VAMP1-201ENST00000361716 LINC00588Q9Y4M8 146 aa8.16□□□□□ -1.1
VAMP1-201ENST00000361716 KCNQ1DNQ9H478 68 aa8.15□□□□□ -1.1
VAMP1-201ENST00000361716 NDUFS5O43920 106 aa8.14□□□□□ -1.11
VAMP1-201ENST00000361716 LCA10Q71F78 164 aa8.14□□□□□ -1.11
VAMP1-201ENST00000361716 COA5Q86WW8 74 aa8.13□□□□□ -1.11
VAMP1-201ENST00000361716 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
VAMP1-201ENST00000361716 LCE6AA0A183 80 aa8.1□□□□□ -1.11
VAMP1-201ENST00000361716 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
VAMP1-201ENST00000361716 UBE2DNLQ8IWF7 75 aa8.07□□□□□ -1.12
VAMP1-201ENST00000361716 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
VAMP1-201ENST00000361716 KRTAP10-11P60412 298 aa8.07□□□□□ -1.12
VAMP1-201ENST00000361716 SPRR4Q96PI1 79 aa8.07□□□□□ -1.12
VAMP1-201ENST00000361716 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
VAMP1-201ENST00000361716 COL7A1Q02388 2944 aa8.05□□□□□ -1.12
VAMP1-201ENST00000361716 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
VAMP1-201ENST00000361716 PRAC1Q96KF2 57 aa8.04□□□□□ -1.12
VAMP1-201ENST00000361716 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
VAMP1-201ENST00000361716 TGP01266 2768 aa8.04□□□□□ -1.12
VAMP1-201ENST00000361716 LOC101927531A0A1B0GV80 90 aa8.04□□□□□ -1.12
VAMP1-201ENST00000361716 TNP2Q05952 138 aa8.04□□□□□ -1.12
VAMP1-201ENST00000361716 MDFIQ99750 246 aa8.03□□□□□ -1.12
VAMP1-201ENST00000361716 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
VAMP1-201ENST00000361716 CMYA5Q8N3K9 4069 aa8.02□□□□□ -1.13
VAMP1-201ENST00000361716 A0A1B0GW54 56 aa8.02□□□□□ -1.13
VAMP1-201ENST00000361716 SPINK7P58062 85 aa8.01□□□□□ -1.13
VAMP1-201ENST00000361716 MOBPQ13875 183 aa8□□□□□ -1.13
VAMP1-201ENST00000361716 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
VAMP1-201ENST00000361716 IGLV9-49A0A0B4J1Y8 123 aa8□□□□□ -1.13
VAMP1-201ENST00000361716 Q75L30 129 aa8□□□□□ -1.13
VAMP1-201ENST00000361716 CNBPP62633 177 aaKnown RBP7.99□□□□□ -1.13
VAMP1-201ENST00000361716 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
VAMP1-201ENST00000361716 PHF5AQ7RTV0 110 aaKnown RBP7.98□□□□□ -1.13
VAMP1-201ENST00000361716 A6NN06 94 aa7.98□□□□□ -1.13
VAMP1-201ENST00000361716 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
VAMP1-201ENST00000361716 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
VAMP1-201ENST00000361716 IGHV6-1A0A0B4J1U7 121 aa7.94□□□□□ -1.14
VAMP1-201ENST00000361716 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
VAMP1-201ENST00000361716 A8MWP4 228 aa7.94□□□□□ -1.14
VAMP1-201ENST00000361716 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
VAMP1-201ENST00000361716 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
VAMP1-201ENST00000361716 KRTAP29-1A8MX34 341 aaPredicted RBP7.93□□□□□ -1.14
VAMP1-201ENST00000361716 DNHD1Q96M86 4753 aa7.92□□□□□ -1.14
VAMP1-201ENST00000361716 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
VAMP1-201ENST00000361716 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
VAMP1-201ENST00000361716 DNAH10OSP0CZ25 163 aa7.91□□□□□ -1.14
VAMP1-201ENST00000361716 DNAH3Q8TD57 4116 aa7.91□□□□□ -1.14
VAMP1-201ENST00000361716 SPRR1AP35321 89 aa7.91□□□□□ -1.14
VAMP1-201ENST00000361716 H3BPC8 53 aa7.91□□□□□ -1.14
VAMP1-201ENST00000361716 LINC00313P59037 77 aa7.91□□□□□ -1.14
VAMP1-201ENST00000361716 H3BNG1 76 aa7.9□□□□□ -1.14
VAMP1-201ENST00000361716 CDK2AP2O75956 126 aa7.9□□□□□ -1.14
VAMP1-201ENST00000361716 C9orf163Q8N9P6 203 aa7.9□□□□□ -1.14
VAMP1-201ENST00000361716 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.15
VAMP1-201ENST00000361716 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
VAMP1-201ENST00000361716 ANAPC11Q9NYG5 84 aa7.86□□□□□ -1.15
VAMP1-201ENST00000361716 HRES1P13985 223 aa7.86□□□□□ -1.15
VAMP1-201ENST00000361716 RETNLBQ9BQ08 111 aa7.85□□□□□ -1.15
VAMP1-201ENST00000361716 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
VAMP1-201ENST00000361716 MMP24-AS1A0A0U1RRL7 71 aa7.85□□□□□ -1.15
VAMP1-201ENST00000361716 H3BS24 57 aa7.84□□□□□ -1.15
VAMP1-201ENST00000361716 LYSTQ99698 3801 aa7.84□□□□□ -1.15
VAMP1-201ENST00000361716 TLX1NBP0CAT3 122 aa7.83□□□□□ -1.16
VAMP1-201ENST00000361716 MEGF8Q7Z7M0 2845 aa7.83□□□□□ -1.16
VAMP1-201ENST00000361716 PLA2G2DQ9UNK4 145 aa7.82□□□□□ -1.16
VAMP1-201ENST00000361716 LINC00472Q9H8W2 130 aa7.82□□□□□ -1.16
VAMP1-201ENST00000361716 K7EIL1 84 aa7.82□□□□□ -1.16
VAMP1-201ENST00000361716 KRTAP1-5Q9BYS1 174 aa7.81□□□□□ -1.16
VAMP1-201ENST00000361716 KRTAP11-1Q8IUC1 163 aa7.81□□□□□ -1.16
VAMP1-201ENST00000361716 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
VAMP1-201ENST00000361716 IGLV8-61A0A075B6I0 122 aa7.79□□□□□ -1.16
VAMP1-201ENST00000361716 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.17
VAMP1-201ENST00000361716 TP53AIP1Q9HCN2 124 aa7.75□□□□□ -1.17
VAMP1-201ENST00000361716 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
VAMP1-201ENST00000361716 A0A1B0GU69 56 aa7.74□□□□□ -1.17
VAMP1-201ENST00000361716 A0A087X002 238 aa7.72□□□□□ -1.17
VAMP1-201ENST00000361716 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
VAMP1-201ENST00000361716 PANO1I0J062 215 aa7.72□□□□□ -1.17
VAMP1-201ENST00000361716 PRKDCP78527 4128 aaKnown RBP7.71□□□□□ -1.17
VAMP1-201ENST00000361716 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.17
VAMP1-201ENST00000361716 FBN3Q75N90 2809 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms