RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 FP248Q71RG6 208 aaPredicted RBP4.91□□□□□ -1.62
CTNND1-203ENST00000361391 CSAG1Q6PB30 78 aa4.9□□□□□ -1.62
CTNND1-203ENST00000361391 XIRP2A4UGR9 3374 aa4.9□□□□□ -1.63
CTNND1-203ENST00000361391 PLAC8Q9NZF1 115 aa4.9□□□□□ -1.63
CTNND1-203ENST00000361391 CDH23Q9H251 3354 aa4.89□□□□□ -1.63
CTNND1-203ENST00000361391 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
CTNND1-203ENST00000361391 LCE6AA0A183 80 aa4.88□□□□□ -1.63
CTNND1-203ENST00000361391 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
CTNND1-203ENST00000361391 Q5VV11 94 aa4.88□□□□□ -1.63
CTNND1-203ENST00000361391 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
CTNND1-203ENST00000361391 R4GN34 69 aa4.88□□□□□ -1.63
CTNND1-203ENST00000361391 A0A0C4DFX4 3053 aa4.88□□□□□ -1.63
CTNND1-203ENST00000361391 TRANK1O15050 2925 aa4.86□□□□□ -1.63
CTNND1-203ENST00000361391 UNC80Q8N2C7 3258 aa4.86□□□□□ -1.63
CTNND1-203ENST00000361391 OXTP01178 125 aa4.85□□□□□ -1.63
CTNND1-203ENST00000361391 SPRR1AP35321 89 aa4.85□□□□□ -1.63
CTNND1-203ENST00000361391 LINC00472Q9H8W2 130 aa4.85□□□□□ -1.63
CTNND1-203ENST00000361391 HECTD1Q9ULT8 2610 aa4.85□□□□□ -1.63
CTNND1-203ENST00000361391 LAMA2P24043 3122 aaKnown RBP4.85□□□□□ -1.63
CTNND1-203ENST00000361391 CFAP54Q96N23 3096 aa4.85□□□□□ -1.63
CTNND1-203ENST00000361391 USP24Q9UPU5 2620 aa4.84□□□□□ -1.63
CTNND1-203ENST00000361391 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
CTNND1-203ENST00000361391 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
CTNND1-203ENST00000361391 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
CTNND1-203ENST00000361391 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
CTNND1-203ENST00000361391 PRUNE2Q8WUY3 3088 aa4.82□□□□□ -1.64
CTNND1-203ENST00000361391 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
CTNND1-203ENST00000361391 DNAH14Q0VDD8 3507 aa4.81□□□□□ -1.64
CTNND1-203ENST00000361391 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
CTNND1-203ENST00000361391 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
CTNND1-203ENST00000361391 PANO1I0J062 215 aa4.8□□□□□ -1.64
CTNND1-203ENST00000361391 MYO15AQ9UKN7 3530 aa4.8□□□□□ -1.64
CTNND1-203ENST00000361391 SPTBN5Q9NRC6 3674 aaKnown RBP4.8□□□□□ -1.64
CTNND1-203ENST00000361391 EYSQ5T1H1 3165 aa4.79□□□□□ -1.64
CTNND1-203ENST00000361391 EPG5Q9HCE0 2579 aa4.78□□□□□ -1.64
CTNND1-203ENST00000361391 TRIOO75962 3097 aa4.78□□□□□ -1.64
CTNND1-203ENST00000361391 M0QZ58 72 aa4.78□□□□□ -1.64
CTNND1-203ENST00000361391 FLNAP21333 2647 aaKnown RBP4.77□□□□□ -1.65
CTNND1-203ENST00000361391 SPRR1BP22528 89 aa4.77□□□□□ -1.65
CTNND1-203ENST00000361391 MGAQ8IWI9 3026 aa4.76□□□□□ -1.65
CTNND1-203ENST00000361391 ROMO1P60602 79 aa4.76□□□□□ -1.65
CTNND1-203ENST00000361391 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
CTNND1-203ENST00000361391 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
CTNND1-203ENST00000361391 ITPR3Q14573 2671 aa4.74□□□□□ -1.65
CTNND1-203ENST00000361391 Q6ZR54 194 aa4.74□□□□□ -1.65
CTNND1-203ENST00000361391 CELSR3Q9NYQ7 3312 aa4.74□□□□□ -1.65
CTNND1-203ENST00000361391 A0A087X002 238 aa4.73□□□□□ -1.65
CTNND1-203ENST00000361391 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
CTNND1-203ENST00000361391 VCANP13611 3396 aa4.72□□□□□ -1.65
CTNND1-203ENST00000361391 WDFY4Q6ZS81 3184 aa4.72□□□□□ -1.65
CTNND1-203ENST00000361391 FLNBO75369 2602 aaKnown RBP4.69□□□□□ -1.66
CTNND1-203ENST00000361391 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
CTNND1-203ENST00000361391 AKAP13Q12802 2813 aa4.68□□□□□ -1.66
CTNND1-203ENST00000361391 ATRQ13535 2644 aa4.68□□□□□ -1.66
CTNND1-203ENST00000361391 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
CTNND1-203ENST00000361391 FREM2Q5SZK8 3169 aa4.67□□□□□ -1.66
CTNND1-203ENST00000361391 A8MU10 97 aa4.67□□□□□ -1.66
CTNND1-203ENST00000361391 VPS13AQ96RL7 3174 aa4.66□□□□□ -1.66
CTNND1-203ENST00000361391 LAMA1P25391 3075 aa4.66□□□□□ -1.66
CTNND1-203ENST00000361391 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.66
CTNND1-203ENST00000361391 FLG2Q5D862 2391 aaPredicted RBP4.65□□□□□ -1.67
CTNND1-203ENST00000361391 MAST4O15021 2626 aa4.63□□□□□ -1.67
CTNND1-203ENST00000361391 CFAP46Q8IYW2 2715 aa4.62□□□□□ -1.67
CTNND1-203ENST00000361391 COL6A3P12111 3177 aa4.62□□□□□ -1.67
CTNND1-203ENST00000361391 C20orf166-AS1Q96NR2 134 aa4.61□□□□□ -1.67
CTNND1-203ENST00000361391 HELZ2Q9BYK8 2649 aaKnown RBP4.6□□□□□ -1.67
CTNND1-203ENST00000361391 ZNF292O60281 2723 aa4.6□□□□□ -1.67
CTNND1-203ENST00000361391 FRYQ5TBA9 3013 aa4.6□□□□□ -1.67
CTNND1-203ENST00000361391 CHD6Q8TD26 2715 aa4.6□□□□□ -1.67
CTNND1-203ENST00000361391 KRTAP7-1Q8IUC3 87 aa4.59□□□□□ -1.67
CTNND1-203ENST00000361391 SPEGQ15772 3267 aa4.58□□□□□ -1.68
CTNND1-203ENST00000361391 CENPEQ02224 2701 aa4.58□□□□□ -1.68
CTNND1-203ENST00000361391 A8MUU9 505 aa4.56□□□□□ -1.68
CTNND1-203ENST00000361391 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
CTNND1-203ENST00000361391 A0A1B0GVY2 172 aa4.55□□□□□ -1.68
CTNND1-203ENST00000361391 DSPP15924 2871 aaKnown RBP4.54□□□□□ -1.68
CTNND1-203ENST00000361391 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
CTNND1-203ENST00000361391 KRTAP13-2Q52LG2 175 aa4.54□□□□□ -1.68
CTNND1-203ENST00000361391 TEX15Q9BXT5 2789 aa4.54□□□□□ -1.68
CTNND1-203ENST00000361391 A6NN06 94 aa4.53□□□□□ -1.68
CTNND1-203ENST00000361391 DMDP11532 3685 aa4.53□□□□□ -1.68
CTNND1-203ENST00000361391 GCN1Q92616 2671 aaKnown RBP4.53□□□□□ -1.68
CTNND1-203ENST00000361391 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-203ENST00000361391 ASB16-AS1Q495Z4 193 aa4.52□□□□□ -1.69
CTNND1-203ENST00000361391 NBEAL1Q6ZS30 2694 aa4.52□□□□□ -1.69
CTNND1-203ENST00000361391 NBEAL2Q6ZNJ1 2754 aa4.5□□□□□ -1.69
CTNND1-203ENST00000361391 WDFY3Q8IZQ1 3526 aa4.49□□□□□ -1.69
CTNND1-203ENST00000361391 BOD1L1Q8NFC6 3051 aa4.49□□□□□ -1.69
CTNND1-203ENST00000361391 KALRNO60229 2985 aa4.49□□□□□ -1.69
CTNND1-203ENST00000361391 FRYLO94915 3013 aa4.49□□□□□ -1.69
CTNND1-203ENST00000361391 LRBAP50851 2863 aa4.49□□□□□ -1.69
CTNND1-203ENST00000361391 ASPMQ8IZT6 3477 aa4.49□□□□□ -1.69
CTNND1-203ENST00000361391 P0C880 135 aa4.48□□□□□ -1.69
CTNND1-203ENST00000361391 KRTAP10-8P60410 259 aa4.46□□□□□ -1.69
CTNND1-203ENST00000361391 IGSF10Q6WRI0 2623 aa4.46□□□□□ -1.7
CTNND1-203ENST00000361391 TEP1Q99973 2627 aaKnown RBP4.46□□□□□ -1.7
CTNND1-203ENST00000361391 UNC79Q9P2D8 2635 aa4.46□□□□□ -1.7
CTNND1-203ENST00000361391 REV3LO60673 3130 aa4.46□□□□□ -1.7
CTNND1-203ENST00000361391 CFAP47Q6ZTR5 3102 aa4.45□□□□□ -1.7
CTNND1-203ENST00000361391 MAP1AP78559 2803 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms