RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 MMP24-AS1A0A0U1RRL7 71 aa5.14□□□□□ -1.59
CTNND1-202ENST00000361332 KRTAP16-1A8MUX0 517 aa5.14□□□□□ -1.59
CTNND1-202ENST00000361332 ADM2Q7Z4H4 148 aa5.14□□□□□ -1.59
CTNND1-202ENST00000361332 ROMO1P60602 79 aa5.12□□□□□ -1.59
CTNND1-202ENST00000361332 RPL37P61927 97 aaKnown RBP5.12□□□□□ -1.59
CTNND1-202ENST00000361332 EPG5Q9HCE0 2579 aa5.09□□□□□ -1.59
CTNND1-202ENST00000361332 FLG2Q5D862 2391 aaPredicted RBP5.08□□□□□ -1.6
CTNND1-202ENST00000361332 ASB16-AS1Q495Z4 193 aa5.07□□□□□ -1.6
CTNND1-202ENST00000361332 Q5W150 140 aa5.07□□□□□ -1.6
CTNND1-202ENST00000361332 RANBP2P49792 3224 aaKnown RBP5.06□□□□□ -1.6
CTNND1-202ENST00000361332 FASNP49327 2511 aaKnown RBP5.06□□□□□ -1.6
CTNND1-202ENST00000361332 LCE6AA0A183 80 aa5.06□□□□□ -1.6
CTNND1-202ENST00000361332 CFAP54Q96N23 3096 aa5.06□□□□□ -1.6
CTNND1-202ENST00000361332 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
CTNND1-202ENST00000361332 MKI67P46013 3256 aaKnown RBP5.03□□□□□ -1.6
CTNND1-202ENST00000361332 LINC00472Q9H8W2 130 aa5.03□□□□□ -1.6
CTNND1-202ENST00000361332 TRANK1O15050 2925 aa5.03□□□□□ -1.6
CTNND1-202ENST00000361332 Q8NDZ9 215 aa5.03□□□□□ -1.6
CTNND1-202ENST00000361332 KRTAP1-3Q8IUG1 177 aa5.02□□□□□ -1.61
CTNND1-202ENST00000361332 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
CTNND1-202ENST00000361332 LAMA2P24043 3122 aaKnown RBP5.01□□□□□ -1.61
CTNND1-202ENST00000361332 SZT2Q5T011 3432 aa5.01□□□□□ -1.61
CTNND1-202ENST00000361332 LAMA3Q16787 3333 aa4.99□□□□□ -1.61
CTNND1-202ENST00000361332 USP34Q70CQ2 3546 aa4.99□□□□□ -1.61
CTNND1-202ENST00000361332 CDH23Q9H251 3354 aa4.99□□□□□ -1.61
CTNND1-202ENST00000361332 SPRR1AP35321 89 aa4.99□□□□□ -1.61
CTNND1-202ENST00000361332 A6NN06 94 aa4.98□□□□□ -1.61
CTNND1-202ENST00000361332 XIRP2A4UGR9 3374 aa4.98□□□□□ -1.61
CTNND1-202ENST00000361332 KRTAP10-1P60331 282 aa4.98□□□□□ -1.61
CTNND1-202ENST00000361332 KRTAP1-1Q07627 177 aa4.98□□□□□ -1.61
CTNND1-202ENST00000361332 FLNAP21333 2647 aaKnown RBP4.97□□□□□ -1.61
CTNND1-202ENST00000361332 USP24Q9UPU5 2620 aa4.97□□□□□ -1.61
CTNND1-202ENST00000361332 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.61
CTNND1-202ENST00000361332 SPRR1BP22528 89 aa4.96□□□□□ -1.62
CTNND1-202ENST00000361332 HECTD1Q9ULT8 2610 aa4.96□□□□□ -1.62
CTNND1-202ENST00000361332 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
CTNND1-202ENST00000361332 KRTAP26-1Q6PEX3 210 aa4.95□□□□□ -1.62
CTNND1-202ENST00000361332 UNC80Q8N2C7 3258 aa4.94□□□□□ -1.62
CTNND1-202ENST00000361332 KRTAP10-2P60368 255 aa4.94□□□□□ -1.62
CTNND1-202ENST00000361332 P0C880 135 aa4.94□□□□□ -1.62
CTNND1-202ENST00000361332 MGAQ8IWI9 3026 aa4.94□□□□□ -1.62
CTNND1-202ENST00000361332 A8MUU9 505 aa4.93□□□□□ -1.62
CTNND1-202ENST00000361332 CENPEQ02224 2701 aa4.93□□□□□ -1.62
CTNND1-202ENST00000361332 Q6ZR54 194 aa4.92□□□□□ -1.62
CTNND1-202ENST00000361332 ITPR3Q14573 2671 aa4.92□□□□□ -1.62
CTNND1-202ENST00000361332 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
CTNND1-202ENST00000361332 MGAM2Q2M2H8 2515 aa4.91□□□□□ -1.62
CTNND1-202ENST00000361332 PANO1I0J062 215 aa4.91□□□□□ -1.62
CTNND1-202ENST00000361332 SPTBN5Q9NRC6 3674 aaKnown RBP4.91□□□□□ -1.62
CTNND1-202ENST00000361332 DNAH14Q0VDD8 3507 aa4.91□□□□□ -1.62
CTNND1-202ENST00000361332 ATRQ13535 2644 aa4.9□□□□□ -1.62
CTNND1-202ENST00000361332 TNP1P09430 55 aa4.89□□□□□ -1.63
CTNND1-202ENST00000361332 FLNBO75369 2602 aaKnown RBP4.88□□□□□ -1.63
CTNND1-202ENST00000361332 TRIOO75962 3097 aa4.88□□□□□ -1.63
CTNND1-202ENST00000361332 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
CTNND1-202ENST00000361332 WDFY4Q6ZS81 3184 aa4.88□□□□□ -1.63
CTNND1-202ENST00000361332 A8MU10 97 aa4.85□□□□□ -1.63
CTNND1-202ENST00000361332 ZNF292O60281 2723 aa4.85□□□□□ -1.63
CTNND1-202ENST00000361332 CHD6Q8TD26 2715 aa4.85□□□□□ -1.63
CTNND1-202ENST00000361332 PRUNE2Q8WUY3 3088 aa4.84□□□□□ -1.63
CTNND1-202ENST00000361332 MYO15AQ9UKN7 3530 aa4.84□□□□□ -1.64
CTNND1-202ENST00000361332 KRTAP10-8P60410 259 aa4.83□□□□□ -1.64
CTNND1-202ENST00000361332 VPS13AQ96RL7 3174 aa4.83□□□□□ -1.64
CTNND1-202ENST00000361332 AKAP13Q12802 2813 aa4.83□□□□□ -1.64
CTNND1-202ENST00000361332 EYSQ5T1H1 3165 aa4.83□□□□□ -1.64
CTNND1-202ENST00000361332 GCN1Q92616 2671 aaKnown RBP4.82□□□□□ -1.64
CTNND1-202ENST00000361332 FRYQ5TBA9 3013 aa4.82□□□□□ -1.64
CTNND1-202ENST00000361332 DSPP15924 2871 aaKnown RBP4.81□□□□□ -1.64
CTNND1-202ENST00000361332 CFAP46Q8IYW2 2715 aa4.81□□□□□ -1.64
CTNND1-202ENST00000361332 MAST4O15021 2626 aa4.8□□□□□ -1.64
CTNND1-202ENST00000361332 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
CTNND1-202ENST00000361332 MAP1AP78559 2803 aaPredicted RBP4.79□□□□□ -1.64
CTNND1-202ENST00000361332 NBEAQ8NFP9 2946 aa4.79□□□□□ -1.64
CTNND1-202ENST00000361332 UNC79Q9P2D8 2635 aa4.78□□□□□ -1.64
CTNND1-202ENST00000361332 A0A1B0GVY2 172 aa4.77□□□□□ -1.65
CTNND1-202ENST00000361332 DMBT1Q9UGM3 2413 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-202ENST00000361332 A0A087X002 238 aa4.77□□□□□ -1.65
CTNND1-202ENST00000361332 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
CTNND1-202ENST00000361332 HELZ2Q9BYK8 2649 aaKnown RBP4.77□□□□□ -1.65
CTNND1-202ENST00000361332 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
CTNND1-202ENST00000361332 CELSR3Q9NYQ7 3312 aa4.76□□□□□ -1.65
CTNND1-202ENST00000361332 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
CTNND1-202ENST00000361332 FREM2Q5SZK8 3169 aa4.75□□□□□ -1.65
CTNND1-202ENST00000361332 VCANP13611 3396 aa4.74□□□□□ -1.65
CTNND1-202ENST00000361332 LAMA1P25391 3075 aa4.74□□□□□ -1.65
CTNND1-202ENST00000361332 KALRNO60229 2985 aa4.71□□□□□ -1.65
CTNND1-202ENST00000361332 KRTAP11-1Q8IUC1 163 aa4.71□□□□□ -1.66
CTNND1-202ENST00000361332 STAB1Q9NY15 2570 aa4.7□□□□□ -1.66
CTNND1-202ENST00000361332 TEX15Q9BXT5 2789 aa4.69□□□□□ -1.66
CTNND1-202ENST00000361332 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
CTNND1-202ENST00000361332 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
CTNND1-202ENST00000361332 SETXQ7Z333 2677 aaKnown RBP4.67□□□□□ -1.66
CTNND1-202ENST00000361332 NBEAL1Q6ZS30 2694 aa4.67□□□□□ -1.66
CTNND1-202ENST00000361332 NOTCH1P46531 2555 aa4.65□□□□□ -1.66
CTNND1-202ENST00000361332 IGSF10Q6WRI0 2623 aa4.64□□□□□ -1.67
CTNND1-202ENST00000361332 SPEGQ15772 3267 aa4.63□□□□□ -1.67
CTNND1-202ENST00000361332 FRYLO94915 3013 aa4.63□□□□□ -1.67
CTNND1-202ENST00000361332 ADGRG4Q8IZF6 3080 aa4.63□□□□□ -1.67
CTNND1-202ENST00000361332 KRTAP7-1Q8IUC3 87 aa4.62□□□□□ -1.67
CTNND1-202ENST00000361332 UBR5O95071 2799 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms