RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
SMC5-201ENST00000361138 SPRR1BP22528 89 aa8.59□□□□□ -1.03
SMC5-201ENST00000361138 CFAP54Q96N23 3096 aa8.59□□□□□ -1.03
SMC5-201ENST00000361138 AKAP13Q12802 2813 aa8.58□□□□□ -1.04
SMC5-201ENST00000361138 FLNBO75369 2602 aaKnown RBP8.55□□□□□ -1.04
SMC5-201ENST00000361138 MGAQ8IWI9 3026 aa8.55□□□□□ -1.04
SMC5-201ENST00000361138 TRIOO75962 3097 aa8.54□□□□□ -1.04
SMC5-201ENST00000361138 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
SMC5-201ENST00000361138 H3BS24 57 aa8.53□□□□□ -1.04
SMC5-201ENST00000361138 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
SMC5-201ENST00000361138 COL6A3P12111 3177 aa8.52□□□□□ -1.05
SMC5-201ENST00000361138 KRTAP29-1A8MX34 341 aaPredicted RBP8.52□□□□□ -1.05
SMC5-201ENST00000361138 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
SMC5-201ENST00000361138 WDFY4Q6ZS81 3184 aa8.5□□□□□ -1.05
SMC5-201ENST00000361138 Q5W150 140 aa8.5□□□□□ -1.05
SMC5-201ENST00000361138 USP24Q9UPU5 2620 aa8.5□□□□□ -1.05
SMC5-201ENST00000361138 LCE6AA0A183 80 aa8.49□□□□□ -1.05
SMC5-201ENST00000361138 A0A1B0GU33 70 aa8.49□□□□□ -1.05
SMC5-201ENST00000361138 HELZ2Q9BYK8 2649 aaKnown RBP8.49□□□□□ -1.05
SMC5-201ENST00000361138 A0A0D9SG42 100 aa8.48□□□□□ -1.05
SMC5-201ENST00000361138 Q6ZR54 194 aa8.47□□□□□ -1.05
SMC5-201ENST00000361138 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
SMC5-201ENST00000361138 ITPR3Q14573 2671 aa8.42□□□□□ -1.06
SMC5-201ENST00000361138 A6NN06 94 aa8.41□□□□□ -1.06
SMC5-201ENST00000361138 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
SMC5-201ENST00000361138 CFAP46Q8IYW2 2715 aa8.41□□□□□ -1.06
SMC5-201ENST00000361138 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
SMC5-201ENST00000361138 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.07
SMC5-201ENST00000361138 EYSQ5T1H1 3165 aa8.39□□□□□ -1.07
SMC5-201ENST00000361138 LINC00483Q53H64 154 aa8.38□□□□□ -1.07
SMC5-201ENST00000361138 LAMA1P25391 3075 aa8.37□□□□□ -1.07
SMC5-201ENST00000361138 VCANP13611 3396 aa8.36□□□□□ -1.07
SMC5-201ENST00000361138 DSPP15924 2871 aaKnown RBP8.35□□□□□ -1.07
SMC5-201ENST00000361138 KRTAP1-5Q9BYS1 174 aa8.35□□□□□ -1.07
SMC5-201ENST00000361138 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
SMC5-201ENST00000361138 SMR3BP02814 79 aaPredicted RBP8.31□□□□□ -1.08
SMC5-201ENST00000361138 REV3LO60673 3130 aa8.31□□□□□ -1.08
SMC5-201ENST00000361138 CELSR3Q9NYQ7 3312 aa8.29□□□□□ -1.08
SMC5-201ENST00000361138 VPS13AQ96RL7 3174 aa8.29□□□□□ -1.08
SMC5-201ENST00000361138 A8MU10 97 aa8.28□□□□□ -1.08
SMC5-201ENST00000361138 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
SMC5-201ENST00000361138 KRTAP7-1Q8IUC3 87 aa8.25□□□□□ -1.09
SMC5-201ENST00000361138 CENPEQ02224 2701 aa8.23□□□□□ -1.09
SMC5-201ENST00000361138 A0A087X002 238 aa8.22□□□□□ -1.09
SMC5-201ENST00000361138 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
SMC5-201ENST00000361138 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.1
SMC5-201ENST00000361138 FRYQ5TBA9 3013 aa8.21□□□□□ -1.1
SMC5-201ENST00000361138 PANO1I0J062 215 aa8.2□□□□□ -1.1
SMC5-201ENST00000361138 ROMO1P60602 79 aa8.19□□□□□ -1.1
SMC5-201ENST00000361138 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
SMC5-201ENST00000361138 J3QL48 77 aa8.16□□□□□ -1.1
SMC5-201ENST00000361138 S4R3F8 94 aa8.15□□□□□ -1.1
SMC5-201ENST00000361138 BAHCC1Q9P281 2608 aa8.15□□□□□ -1.1
SMC5-201ENST00000361138 ATRQ13535 2644 aa8.14□□□□□ -1.11
SMC5-201ENST00000361138 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
SMC5-201ENST00000361138 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
SMC5-201ENST00000361138 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
SMC5-201ENST00000361138 NBEAQ8NFP9 2946 aa8.11□□□□□ -1.11
SMC5-201ENST00000361138 MGAM2Q2M2H8 2515 aa8.11□□□□□ -1.11
SMC5-201ENST00000361138 USP34Q70CQ2 3546 aa8.11□□□□□ -1.11
SMC5-201ENST00000361138 MAST4O15021 2626 aa8.11□□□□□ -1.11
SMC5-201ENST00000361138 DMXL2Q8TDJ6 3036 aa8.1□□□□□ -1.11
SMC5-201ENST00000361138 DMXL1Q9Y485 3027 aa8.09□□□□□ -1.11
SMC5-201ENST00000361138 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
SMC5-201ENST00000361138 UNC79Q9P2D8 2635 aa8.07□□□□□ -1.12
SMC5-201ENST00000361138 SPEGQ15772 3267 aa8.06□□□□□ -1.12
SMC5-201ENST00000361138 BOD1L1Q8NFC6 3051 aa8.06□□□□□ -1.12
SMC5-201ENST00000361138 TEP1Q99973 2627 aaKnown RBP8.05□□□□□ -1.12
SMC5-201ENST00000361138 FRYLO94915 3013 aa8.05□□□□□ -1.12
SMC5-201ENST00000361138 COX6B2Q6YFQ2 88 aa8.04□□□□□ -1.12
SMC5-201ENST00000361138 KRTAP13-1Q8IUC0 172 aa8.04□□□□□ -1.12
SMC5-201ENST00000361138 KALRNO60229 2985 aa8.04□□□□□ -1.12
SMC5-201ENST00000361138 MYO15AQ9UKN7 3530 aa8.03□□□□□ -1.12
SMC5-201ENST00000361138 FREM2Q5SZK8 3169 aa8.03□□□□□ -1.12
SMC5-201ENST00000361138 CHD6Q8TD26 2715 aa8.01□□□□□ -1.13
SMC5-201ENST00000361138 ZZEF1O43149 2961 aa8.01□□□□□ -1.13
SMC5-201ENST00000361138 Q6ZSA8 131 aa8□□□□□ -1.13
SMC5-201ENST00000361138 ATMQ13315 3056 aa8□□□□□ -1.13
SMC5-201ENST00000361138 KRTAP10-2P60368 255 aa7.98□□□□□ -1.13
SMC5-201ENST00000361138 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
SMC5-201ENST00000361138 GCN1Q92616 2671 aaKnown RBP7.96□□□□□ -1.13
SMC5-201ENST00000361138 LRBAP50851 2863 aa7.95□□□□□ -1.14
SMC5-201ENST00000361138 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
SMC5-201ENST00000361138 CAMK2N1Q7Z7J9 78 aa7.93□□□□□ -1.14
SMC5-201ENST00000361138 COL12A1Q99715 3063 aa7.92□□□□□ -1.14
SMC5-201ENST00000361138 TEX15Q9BXT5 2789 aa7.92□□□□□ -1.14
SMC5-201ENST00000361138 A0A0A0MQY5 61 aa7.9□□□□□ -1.14
SMC5-201ENST00000361138 ADGRG4Q8IZF6 3080 aa7.88□□□□□ -1.15
SMC5-201ENST00000361138 FLNCQ14315 2725 aa7.88□□□□□ -1.15
SMC5-201ENST00000361138 MAP1AP78559 2803 aaPredicted RBP7.87□□□□□ -1.15
SMC5-201ENST00000361138 NBEAL2Q6ZNJ1 2754 aa7.87□□□□□ -1.15
SMC5-201ENST00000361138 COL6A5A8TX70 2615 aa7.85□□□□□ -1.15
SMC5-201ENST00000361138 R4GN34 69 aa7.84□□□□□ -1.15
SMC5-201ENST00000361138 UTP20O75691 2785 aaKnown RBP7.84□□□□□ -1.16
SMC5-201ENST00000361138 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.16
SMC5-201ENST00000361138 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
SMC5-201ENST00000361138 SETXQ7Z333 2677 aaKnown RBP7.82□□□□□ -1.16
SMC5-201ENST00000361138 LOC400499M0QZD8 3231 aa7.81□□□□□ -1.16
SMC5-201ENST00000361138 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
SMC5-201ENST00000361138 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms