RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 Q6ZSA8 131 aa12.95□□□□□ -0.34
SMURF1-201ENST00000361125 FP248Q71RG6 208 aaPredicted RBP12.95□□□□□ -0.34
SMURF1-201ENST00000361125 ATRQ13535 2644 aa12.94□□□□□ -0.34
SMURF1-201ENST00000361125 CFAP46Q8IYW2 2715 aa12.91□□□□□ -0.34
SMURF1-201ENST00000361125 HRES1P13985 223 aa12.89□□□□□ -0.35
SMURF1-201ENST00000361125 MMP24-AS1A0A0U1RRL7 71 aa12.87□□□□□ -0.35
SMURF1-201ENST00000361125 VPS13AQ96RL7 3174 aa12.87□□□□□ -0.35
SMURF1-201ENST00000361125 OXTP01178 125 aa12.86□□□□□ -0.35
SMURF1-201ENST00000361125 KRTAP26-1Q6PEX3 210 aa12.86□□□□□ -0.35
SMURF1-201ENST00000361125 LCA10Q71F78 164 aa12.86□□□□□ -0.35
SMURF1-201ENST00000361125 AKAP13Q12802 2813 aa12.84□□□□□ -0.35
SMURF1-201ENST00000361125 ZNF292O60281 2723 aa12.82□□□□□ -0.36
SMURF1-201ENST00000361125 MAST4O15021 2626 aa12.81□□□□□ -0.36
SMURF1-201ENST00000361125 Q75L30 129 aa12.81□□□□□ -0.36
SMURF1-201ENST00000361125 CELSR3Q9NYQ7 3312 aa12.8□□□□□ -0.36
SMURF1-201ENST00000361125 SZT2Q5T011 3432 aa12.8□□□□□ -0.36
SMURF1-201ENST00000361125 VCANP13611 3396 aa12.79□□□□□ -0.36
SMURF1-201ENST00000361125 Q8N9P0 234 aaPredicted RBP12.78□□□□□ -0.36
SMURF1-201ENST00000361125 ZCCHC13Q8WW36 166 aaKnown RBP12.77□□□□□ -0.36
SMURF1-201ENST00000361125 CENPEQ02224 2701 aa12.76□□□□□ -0.37
SMURF1-201ENST00000361125 LAMA1P25391 3075 aa12.76□□□□□ -0.37
SMURF1-201ENST00000361125 LINC00472Q9H8W2 130 aa12.76□□□□□ -0.37
SMURF1-201ENST00000361125 FRYQ5TBA9 3013 aa12.75□□□□□ -0.37
SMURF1-201ENST00000361125 KRTAP10-2P60368 255 aa12.74□□□□□ -0.37
SMURF1-201ENST00000361125 SPRR1BP22528 89 aa12.73□□□□□ -0.37
SMURF1-201ENST00000361125 KRTAP10-1P60331 282 aa12.73□□□□□ -0.37
SMURF1-201ENST00000361125 LINC01558Q9Y6Z2 57 aa12.71□□□□□ -0.38
SMURF1-201ENST00000361125 Q5VV11 94 aa12.68□□□□□ -0.38
SMURF1-201ENST00000361125 DSPP15924 2871 aaKnown RBP12.68□□□□□ -0.38
SMURF1-201ENST00000361125 Q5W150 140 aa12.67□□□□□ -0.38
SMURF1-201ENST00000361125 A0A1B0GU33 70 aa12.67□□□□□ -0.38
SMURF1-201ENST00000361125 M0R2T5 61 aa12.67□□□□□ -0.38
SMURF1-201ENST00000361125 Q5VSD8 79 aa12.66□□□□□ -0.38
SMURF1-201ENST00000361125 S4R3F8 94 aa12.62□□□□□ -0.39
SMURF1-201ENST00000361125 PANO1I0J062 215 aa12.62□□□□□ -0.39
SMURF1-201ENST00000361125 LCE6AA0A183 80 aa12.61□□□□□ -0.39
SMURF1-201ENST00000361125 KRTAP4-16G5E9R7 235 aaPredicted RBP12.6□□□□□ -0.39
SMURF1-201ENST00000361125 CHD6Q8TD26 2715 aa12.58□□□□□ -0.4
SMURF1-201ENST00000361125 SPINK7P58062 85 aa12.56□□□□□ -0.4
SMURF1-201ENST00000361125 CAMK2N1Q7Z7J9 78 aa12.56□□□□□ -0.4
SMURF1-201ENST00000361125 GCN1Q92616 2671 aaKnown RBP12.52□□□□□ -0.4
SMURF1-201ENST00000361125 NBEAQ8NFP9 2946 aa12.52□□□□□ -0.41
SMURF1-201ENST00000361125 LINC00483Q53H64 154 aa12.52□□□□□ -0.41
SMURF1-201ENST00000361125 CSAG1Q6PB30 78 aa12.51□□□□□ -0.41
SMURF1-201ENST00000361125 TEX15Q9BXT5 2789 aa12.48□□□□□ -0.41
SMURF1-201ENST00000361125 FREM2Q5SZK8 3169 aa12.47□□□□□ -0.41
SMURF1-201ENST00000361125 KALRNO60229 2985 aa12.44□□□□□ -0.42
SMURF1-201ENST00000361125 SPTBN5Q9NRC6 3674 aaKnown RBP12.44□□□□□ -0.42
SMURF1-201ENST00000361125 KRTAP29-1A8MX34 341 aaPredicted RBP12.44□□□□□ -0.42
SMURF1-201ENST00000361125 Q6ZR54 194 aa12.43□□□□□ -0.42
SMURF1-201ENST00000361125 COL6A3P12111 3177 aa12.43□□□□□ -0.42
SMURF1-201ENST00000361125 MAP1AP78559 2803 aaPredicted RBP12.42□□□□□ -0.42
SMURF1-201ENST00000361125 PRAC1Q96KF2 57 aa12.42□□□□□ -0.42
SMURF1-201ENST00000361125 TEP1Q99973 2627 aaKnown RBP12.41□□□□□ -0.42
SMURF1-201ENST00000361125 DMAC1Q96GE9 116 aa12.4□□□□□ -0.43
SMURF1-201ENST00000361125 FRYLO94915 3013 aa12.37□□□□□ -0.43
SMURF1-201ENST00000361125 NBEAL2Q6ZNJ1 2754 aa12.37□□□□□ -0.43
SMURF1-201ENST00000361125 A0A087X002 238 aa12.37□□□□□ -0.43
SMURF1-201ENST00000361125 SEC61BP60468 96 aaKnown RBP12.37□□□□□ -0.43
SMURF1-201ENST00000361125 IGSF10Q6WRI0 2623 aa12.36□□□□□ -0.43
SMURF1-201ENST00000361125 UNC79Q9P2D8 2635 aa12.34□□□□□ -0.43
SMURF1-201ENST00000361125 KRTAP11-1Q8IUC1 163 aa12.32□□□□□ -0.44
SMURF1-201ENST00000361125 BOD1L1Q8NFC6 3051 aa12.32□□□□□ -0.44
SMURF1-201ENST00000361125 ADGRG4Q8IZF6 3080 aa12.3□□□□□ -0.44
SMURF1-201ENST00000361125 LRBAP50851 2863 aa12.3□□□□□ -0.44
SMURF1-201ENST00000361125 R4GN34 69 aa12.29□□□□□ -0.44
SMURF1-201ENST00000361125 SPEGQ15772 3267 aa12.27□□□□□ -0.45
SMURF1-201ENST00000361125 KRTAP7-1Q8IUC3 87 aa12.26□□□□□ -0.45
SMURF1-201ENST00000361125 LUZP6Q538Z0 58 aa12.23□□□□□ -0.45
SMURF1-201ENST00000361125 SETXQ7Z333 2677 aaKnown RBP12.23□□□□□ -0.45
SMURF1-201ENST00000361125 ATMQ13315 3056 aa12.23□□□□□ -0.45
SMURF1-201ENST00000361125 COL6A5A8TX70 2615 aa12.23□□□□□ -0.45
SMURF1-201ENST00000361125 Q6ZRN7 208 aaPredicted RBP12.22□□□□□ -0.45
SMURF1-201ENST00000361125 NOTCH2NLQ7Z3S9 236 aa12.22□□□□□ -0.45
SMURF1-201ENST00000361125 NBEAL1Q6ZS30 2694 aa12.16□□□□□ -0.46
SMURF1-201ENST00000361125 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
SMURF1-201ENST00000361125 USP34Q70CQ2 3546 aa12.15□□□□□ -0.46
SMURF1-201ENST00000361125 H1FX-AS1Q4G0G2 97 aa12.12□□□□□ -0.47
SMURF1-201ENST00000361125 M0QZ58 72 aa12.12□□□□□ -0.47
SMURF1-201ENST00000361125 REV3LO60673 3130 aa12.09□□□□□ -0.47
SMURF1-201ENST00000361125 NOTCH1P46531 2555 aa12.09□□□□□ -0.47
SMURF1-201ENST00000361125 ADM2Q7Z4H4 148 aa12.08□□□□□ -0.48
SMURF1-201ENST00000361125 RPL37P61927 97 aaKnown RBP12.06□□□□□ -0.48
SMURF1-201ENST00000361125 SPATA8Q6RVD6 105 aa12.06□□□□□ -0.48
SMURF1-201ENST00000361125 BAHCC1Q9P281 2608 aa12.06□□□□□ -0.48
SMURF1-201ENST00000361125 DMXL2Q8TDJ6 3036 aa12.04□□□□□ -0.48
SMURF1-201ENST00000361125 ITPR1Q14643 2758 aa12.03□□□□□ -0.48
SMURF1-201ENST00000361125 COL12A1Q99715 3063 aa12.02□□□□□ -0.48
SMURF1-201ENST00000361125 ZZEF1O43149 2961 aa12.02□□□□□ -0.48
SMURF1-201ENST00000361125 EYSQ5T1H1 3165 aa12.01□□□□□ -0.49
SMURF1-201ENST00000361125 TACC2O95359 2948 aa12□□□□□ -0.49
SMURF1-201ENST00000361125 UBR5O95071 2799 aaPredicted RBP11.99□□□□□ -0.49
SMURF1-201ENST00000361125 KRTAP13-2Q52LG2 175 aa11.99□□□□□ -0.49
SMURF1-201ENST00000361125 ROMO1P60602 79 aa11.98□□□□□ -0.49
SMURF1-201ENST00000361125 MYO15AQ9UKN7 3530 aa11.98□□□□□ -0.49
SMURF1-201ENST00000361125 ITPR2Q14571 2701 aa11.97□□□□□ -0.49
SMURF1-201ENST00000361125 ASB16-AS1Q495Z4 193 aa11.96□□□□□ -0.49
SMURF1-201ENST00000361125 KRTAP13-1Q8IUC0 172 aa11.96□□□□□ -0.49
SMURF1-201ENST00000361125 FLNCQ14315 2725 aa11.95□□□□□ -0.5
SMURF1-201ENST00000361125 A6NN06 94 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 880.4 ms