RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 EPM2AB3EWF7 344 aa9.29□□□□□ -0.92
GABPB1-202ENST00000359031 BCE1O60756 84 aa9.29□□□□□ -0.92
GABPB1-202ENST00000359031 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
GABPB1-202ENST00000359031 SPRR4Q96PI1 79 aa9.28□□□□□ -0.92
GABPB1-202ENST00000359031 ALMS1Q8TCU4 4167 aa9.28□□□□□ -0.92
GABPB1-202ENST00000359031 PANO1I0J062 215 aa9.27□□□□□ -0.92
GABPB1-202ENST00000359031 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
GABPB1-202ENST00000359031 UBE2AP49459 152 aa9.27□□□□□ -0.93
GABPB1-202ENST00000359031 SCXQ7RTU7 201 aa9.27□□□□□ -0.93
GABPB1-202ENST00000359031 SPRR1BP22528 89 aa9.26□□□□□ -0.93
GABPB1-202ENST00000359031 RTL8CO15255 209 aa9.25□□□□□ -0.93
GABPB1-202ENST00000359031 CRYGAP11844 174 aa9.25□□□□□ -0.93
GABPB1-202ENST00000359031 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.25□□□□□ -0.93
GABPB1-202ENST00000359031 BPY2O14599 106 aa9.24□□□□□ -0.93
GABPB1-202ENST00000359031 C1orf134Q5TEV5 83 aa9.23□□□□□ -0.93
GABPB1-202ENST00000359031 SMIM20Q8N5G0 67 aa9.23□□□□□ -0.93
GABPB1-202ENST00000359031 DPH3Q96FX2 82 aa9.23□□□□□ -0.93
GABPB1-202ENST00000359031 HERC2O95714 4834 aa9.23□□□□□ -0.93
GABPB1-202ENST00000359031 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
GABPB1-202ENST00000359031 IGFL1Q6UW32 110 aa9.22□□□□□ -0.93
GABPB1-202ENST00000359031 SS18L2Q9UHA2 77 aa9.21□□□□□ -0.93
GABPB1-202ENST00000359031 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
GABPB1-202ENST00000359031 TRAV7A0A075B6U4 112 aa9.19□□□□□ -0.94
GABPB1-202ENST00000359031 FRAS1Q86XX4 4008 aa9.18□□□□□ -0.94
GABPB1-202ENST00000359031 DNAH6Q9C0G6 4158 aa9.17□□□□□ -0.94
GABPB1-202ENST00000359031 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
GABPB1-202ENST00000359031 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
GABPB1-202ENST00000359031 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
GABPB1-202ENST00000359031 Q8N9L7 120 aa9.16□□□□□ -0.94
GABPB1-202ENST00000359031 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
GABPB1-202ENST00000359031 A0A0G2JQZ4 141 aa9.12□□□□□ -0.95
GABPB1-202ENST00000359031 ZNF706Q9Y5V0 76 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-202ENST00000359031 A0A087WSZ3 146 aa9.1□□□□□ -0.95
GABPB1-202ENST00000359031 DSCR10P59022 87 aa9.09□□□□□ -0.95
GABPB1-202ENST00000359031 LINC00483Q53H64 154 aa9.09□□□□□ -0.95
GABPB1-202ENST00000359031 PSORS1C2Q9UIG4 136 aa9.09□□□□□ -0.95
GABPB1-202ENST00000359031 CYSTM1Q9H1C7 97 aa9.09□□□□□ -0.95
GABPB1-202ENST00000359031 KMT2AQ03164 3969 aa9.08□□□□□ -0.96
GABPB1-202ENST00000359031 DNAH2Q9P225 4427 aa9.08□□□□□ -0.96
GABPB1-202ENST00000359031 TMEM258P61165 79 aa9.08□□□□□ -0.96
GABPB1-202ENST00000359031 HECTD4Q9Y4D8 3996 aa9.08□□□□□ -0.96
GABPB1-202ENST00000359031 C20orf197Q8N268 126 aa9.07□□□□□ -0.96
GABPB1-202ENST00000359031 KIAA1109Q2LD37 5005 aa9.07□□□□□ -0.96
GABPB1-202ENST00000359031 RPL37AP61513 92 aaKnown RBP9.06□□□□□ -0.96
GABPB1-202ENST00000359031 ZNF861PO60384 105 aa9.05□□□□□ -0.96
GABPB1-202ENST00000359031 K7EQZ3 153 aa9.05□□□□□ -0.96
GABPB1-202ENST00000359031 KLKP1Q107X0 134 aa9.04□□□□□ -0.96
GABPB1-202ENST00000359031 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
GABPB1-202ENST00000359031 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.97
GABPB1-202ENST00000359031 RYR1P21817 5038 aa9□□□□□ -0.97
GABPB1-202ENST00000359031 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
GABPB1-202ENST00000359031 HCG22E2RYF7 251 aa9□□□□□ -0.97
GABPB1-202ENST00000359031 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
GABPB1-202ENST00000359031 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
GABPB1-202ENST00000359031 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
GABPB1-202ENST00000359031 NDUFC1O43677 76 aa8.97□□□□□ -0.97
GABPB1-202ENST00000359031 DEFB116Q30KQ4 102 aa8.97□□□□□ -0.97
GABPB1-202ENST00000359031 TMEM254Q8TBM7 123 aa8.97□□□□□ -0.97
GABPB1-202ENST00000359031 J3KT08 172 aa8.96□□□□□ -0.98
GABPB1-202ENST00000359031 DNAH8Q96JB1 4490 aa8.95□□□□□ -0.98
GABPB1-202ENST00000359031 A8MWP4 228 aa8.95□□□□□ -0.98
GABPB1-202ENST00000359031 H7BZZ5 65 aa8.95□□□□□ -0.98
GABPB1-202ENST00000359031 SNURFQ9Y675 71 aa8.95□□□□□ -0.98
GABPB1-202ENST00000359031 Q6ZSA8 131 aa8.94□□□□□ -0.98
GABPB1-202ENST00000359031 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
GABPB1-202ENST00000359031 A0A1B0GVY2 172 aa8.94□□□□□ -0.98
GABPB1-202ENST00000359031 MOBPQ13875 183 aa8.94□□□□□ -0.98
GABPB1-202ENST00000359031 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
GABPB1-202ENST00000359031 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
GABPB1-202ENST00000359031 A0A0U1RQV1 116 aa8.92□□□□□ -0.98
GABPB1-202ENST00000359031 FAM236DA0A1B0GTK5 79 aa8.92□□□□□ -0.98
GABPB1-202ENST00000359031 FAM236CP0DP71 79 aa8.92□□□□□ -0.98
GABPB1-202ENST00000359031 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
GABPB1-202ENST00000359031 KRTAP10-1P60331 282 aa8.9□□□□□ -0.99
GABPB1-202ENST00000359031 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-202ENST00000359031 DNAH11Q96DT5 4516 aa8.89□□□□□ -0.99
GABPB1-202ENST00000359031 ABCA13Q86UQ4 5058 aa8.88□□□□□ -0.99
GABPB1-202ENST00000359031 WFDC13Q8IUB5 93 aa8.88□□□□□ -0.99
GABPB1-202ENST00000359031 Q96NJ1 140 aa8.88□□□□□ -0.99
GABPB1-202ENST00000359031 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
GABPB1-202ENST00000359031 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
GABPB1-202ENST00000359031 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
GABPB1-202ENST00000359031 NDUFB1O75438 58 aa8.87□□□□□ -0.99
GABPB1-202ENST00000359031 ATP5EP56381 51 aaPredicted RBP8.87□□□□□ -0.99
GABPB1-202ENST00000359031 CASC2Q6XLA1 102 aa8.87□□□□□ -0.99
GABPB1-202ENST00000359031 SRRM2Q9UQ35 2752 aaKnown RBP8.86□□□□□ -0.99
GABPB1-202ENST00000359031 C5orf47Q569G3 176 aa8.86□□□□□ -0.99
GABPB1-202ENST00000359031 HRCT1Q6UXD1 115 aa8.86□□□□□ -0.99
GABPB1-202ENST00000359031 PKHD1P08F94 4074 aa8.84□□□□□ -0.99
GABPB1-202ENST00000359031 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
GABPB1-202ENST00000359031 CD164Q04900 197 aa8.83□□□□□ -1
GABPB1-202ENST00000359031 FAT2Q9NYQ8 4349 aa8.83□□□□□ -1
GABPB1-202ENST00000359031 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
GABPB1-202ENST00000359031 PKD1P98161 4303 aa8.81□□□□□ -1
GABPB1-202ENST00000359031 ZCCHC13Q8WW36 166 aaKnown RBP8.8□□□□□ -1
GABPB1-202ENST00000359031 DYNC1H1Q14204 4646 aaKnown RBP8.8□□□□□ -1
GABPB1-202ENST00000359031 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
GABPB1-202ENST00000359031 SERP1Q9Y6X1 66 aa8.79□□□□□ -1
GABPB1-202ENST00000359031 A0A1B0GVX0 72 aa8.78□□□□□ -1
GABPB1-202ENST00000359031 CDK2AP2O75956 126 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms