RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
CHD3-202ENST00000358181 ZCCHC13Q8WW36 166 aaKnown RBP6.13□□□□□ -1.43
CHD3-202ENST00000358181 FREM2Q5SZK8 3169 aa6.13□□□□□ -1.43
CHD3-202ENST00000358181 KRTAP1-3Q8IUG1 177 aa6.11□□□□□ -1.43
CHD3-202ENST00000358181 HECTD1Q9ULT8 2610 aa6.11□□□□□ -1.43
CHD3-202ENST00000358181 CR1P17927 2039 aa6.11□□□□□ -1.43
CHD3-202ENST00000358181 KLK9Q2XQG4 91 aa6.11□□□□□ -1.43
CHD3-202ENST00000358181 FAM229BQ4G0N7 80 aa6.1□□□□□ -1.43
CHD3-202ENST00000358181 WDFY4Q6ZS81 3184 aa6.1□□□□□ -1.43
CHD3-202ENST00000358181 A0A1W2PNM2 257 aa6.09□□□□□ -1.43
CHD3-202ENST00000358181 FP248Q71RG6 208 aaPredicted RBP6.08□□□□□ -1.44
CHD3-202ENST00000358181 Q8N9P0 234 aaPredicted RBP6.07□□□□□ -1.44
CHD3-202ENST00000358181 VPS13AQ96RL7 3174 aa6.07□□□□□ -1.44
CHD3-202ENST00000358181 EPG5Q9HCE0 2579 aa6.07□□□□□ -1.44
CHD3-202ENST00000358181 KRTAP1-1Q07627 177 aa6.06□□□□□ -1.44
CHD3-202ENST00000358181 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
CHD3-202ENST00000358181 MGAQ8IWI9 3026 aa6.04□□□□□ -1.44
CHD3-202ENST00000358181 ROMO1P60602 79 aa6.04□□□□□ -1.44
CHD3-202ENST00000358181 PRR34Q9NV39 138 aa6.03□□□□□ -1.44
CHD3-202ENST00000358181 VCANP13611 3396 aa6.03□□□□□ -1.44
CHD3-202ENST00000358181 COL6A3P12111 3177 aa6.02□□□□□ -1.45
CHD3-202ENST00000358181 MGAM2Q2M2H8 2515 aa6.02□□□□□ -1.45
CHD3-202ENST00000358181 FLNBO75369 2602 aaKnown RBP6.02□□□□□ -1.45
CHD3-202ENST00000358181 Q75L30 129 aa6.02□□□□□ -1.45
CHD3-202ENST00000358181 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
CHD3-202ENST00000358181 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
CHD3-202ENST00000358181 MYO15AQ9UKN7 3530 aa6.01□□□□□ -1.45
CHD3-202ENST00000358181 OXTP01178 125 aa6□□□□□ -1.45
CHD3-202ENST00000358181 CYSTM1Q9H1C7 97 aa6□□□□□ -1.45
CHD3-202ENST00000358181 RPL37P61927 97 aaKnown RBP5.96□□□□□ -1.45
CHD3-202ENST00000358181 Q5W150 140 aa5.96□□□□□ -1.46
CHD3-202ENST00000358181 CHD9Q3L8U1 2897 aa5.96□□□□□ -1.46
CHD3-202ENST00000358181 Q8NDZ9 215 aa5.95□□□□□ -1.46
CHD3-202ENST00000358181 ITPR3Q14573 2671 aa5.94□□□□□ -1.46
CHD3-202ENST00000358181 SPEGQ15772 3267 aa5.94□□□□□ -1.46
CHD3-202ENST00000358181 FLNAP21333 2647 aaKnown RBP5.93□□□□□ -1.46
CHD3-202ENST00000358181 LAMA1P25391 3075 aa5.93□□□□□ -1.46
CHD3-202ENST00000358181 WDFY3Q8IZQ1 3526 aa5.93□□□□□ -1.46
CHD3-202ENST00000358181 Q5VV11 94 aa5.93□□□□□ -1.46
CHD3-202ENST00000358181 DCHS1Q96JQ0 3298 aa5.91□□□□□ -1.46
CHD3-202ENST00000358181 CFAP46Q8IYW2 2715 aa5.9□□□□□ -1.46
CHD3-202ENST00000358181 EYSQ5T1H1 3165 aa5.9□□□□□ -1.47
CHD3-202ENST00000358181 CFAP47Q6ZTR5 3102 aa5.9□□□□□ -1.47
CHD3-202ENST00000358181 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
CHD3-202ENST00000358181 OCR1Q9BZK8 76 aa5.89□□□□□ -1.47
CHD3-202ENST00000358181 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
CHD3-202ENST00000358181 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
CHD3-202ENST00000358181 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
CHD3-202ENST00000358181 P0C880 135 aa5.88□□□□□ -1.47
CHD3-202ENST00000358181 ATRQ13535 2644 aa5.87□□□□□ -1.47
CHD3-202ENST00000358181 LCE6AA0A183 80 aa5.87□□□□□ -1.47
CHD3-202ENST00000358181 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
CHD3-202ENST00000358181 KRTAP10-2P60368 255 aa5.87□□□□□ -1.47
CHD3-202ENST00000358181 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
CHD3-202ENST00000358181 MMP24-AS1A0A0U1RRL7 71 aa5.85□□□□□ -1.47
CHD3-202ENST00000358181 CENPEQ02224 2701 aa5.84□□□□□ -1.47
CHD3-202ENST00000358181 SPRR1BP22528 89 aa5.84□□□□□ -1.47
CHD3-202ENST00000358181 HELZ2Q9BYK8 2649 aaKnown RBP5.84□□□□□ -1.48
CHD3-202ENST00000358181 FRYQ5TBA9 3013 aa5.83□□□□□ -1.48
CHD3-202ENST00000358181 AKAP13Q12802 2813 aa5.83□□□□□ -1.48
CHD3-202ENST00000358181 A8MUU9 505 aa5.83□□□□□ -1.48
CHD3-202ENST00000358181 MAST4O15021 2626 aa5.81□□□□□ -1.48
CHD3-202ENST00000358181 ASB16-AS1Q495Z4 193 aa5.8□□□□□ -1.48
CHD3-202ENST00000358181 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
CHD3-202ENST00000358181 CHD6Q8TD26 2715 aa5.79□□□□□ -1.48
CHD3-202ENST00000358181 ASPMQ8IZT6 3477 aa5.78□□□□□ -1.48
CHD3-202ENST00000358181 TRANK1O15050 2925 aa5.78□□□□□ -1.48
CHD3-202ENST00000358181 TEX15Q9BXT5 2789 aa5.77□□□□□ -1.49
CHD3-202ENST00000358181 FLG2Q5D862 2391 aaPredicted RBP5.77□□□□□ -1.49
CHD3-202ENST00000358181 KRTAP1-5Q9BYS1 174 aa5.77□□□□□ -1.49
CHD3-202ENST00000358181 BOD1L1Q8NFC6 3051 aa5.76□□□□□ -1.49
CHD3-202ENST00000358181 Q6ZR54 194 aa5.76□□□□□ -1.49
CHD3-202ENST00000358181 MAP1AP78559 2803 aaPredicted RBP5.76□□□□□ -1.49
CHD3-202ENST00000358181 TEP1Q99973 2627 aaKnown RBP5.75□□□□□ -1.49
CHD3-202ENST00000358181 FRYLO94915 3013 aa5.75□□□□□ -1.49
CHD3-202ENST00000358181 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
CHD3-202ENST00000358181 A6NN06 94 aa5.74□□□□□ -1.49
CHD3-202ENST00000358181 A8MU10 97 aa5.74□□□□□ -1.49
CHD3-202ENST00000358181 DSPP15924 2871 aaKnown RBP5.73□□□□□ -1.49
CHD3-202ENST00000358181 KALRNO60229 2985 aa5.72□□□□□ -1.49
CHD3-202ENST00000358181 PANO1I0J062 215 aa5.72□□□□□ -1.49
CHD3-202ENST00000358181 TNP1P09430 55 aa5.71□□□□□ -1.5
CHD3-202ENST00000358181 CRYBG3Q68DQ2 2970 aa5.7□□□□□ -1.5
CHD3-202ENST00000358181 LRBAP50851 2863 aa5.68□□□□□ -1.5
CHD3-202ENST00000358181 KRTAP26-1Q6PEX3 210 aa5.67□□□□□ -1.5
CHD3-202ENST00000358181 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
CHD3-202ENST00000358181 DMXL2Q8TDJ6 3036 aa5.66□□□□□ -1.5
CHD3-202ENST00000358181 LAMA5O15230 3695 aa5.65□□□□□ -1.5
CHD3-202ENST00000358181 CSMD1Q96PZ7 3565 aa5.64□□□□□ -1.51
CHD3-202ENST00000358181 A0A087X002 238 aa5.63□□□□□ -1.51
CHD3-202ENST00000358181 LINC00472Q9H8W2 130 aa5.63□□□□□ -1.51
CHD3-202ENST00000358181 NBEAL2Q6ZNJ1 2754 aa5.61□□□□□ -1.51
CHD3-202ENST00000358181 ATMQ13315 3056 aa5.61□□□□□ -1.51
CHD3-202ENST00000358181 SETXQ7Z333 2677 aaKnown RBP5.6□□□□□ -1.51
CHD3-202ENST00000358181 ADGRG4Q8IZF6 3080 aa5.58□□□□□ -1.52
CHD3-202ENST00000358181 GCN1Q92616 2671 aaKnown RBP5.58□□□□□ -1.52
CHD3-202ENST00000358181 TACC2O95359 2948 aa5.57□□□□□ -1.52
CHD3-202ENST00000358181 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
CHD3-202ENST00000358181 ZFHX4Q86UP3 3567 aa5.56□□□□□ -1.52
CHD3-202ENST00000358181 COL12A1Q99715 3063 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms