RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 CHD8Q9HCK8 2581 aa9.45□□□□□ -0.9
PCNX3-201ENST00000355703 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
PCNX3-201ENST00000355703 A8MUU9 505 aa9.42□□□□□ -0.9
PCNX3-201ENST00000355703 SPRR1BP22528 89 aa9.4□□□□□ -0.9
PCNX3-201ENST00000355703 KRTAP1-1Q07627 177 aa9.4□□□□□ -0.9
PCNX3-201ENST00000355703 FASNP49327 2511 aaKnown RBP9.39□□□□□ -0.91
PCNX3-201ENST00000355703 A0A0C4DFX4 3053 aa9.39□□□□□ -0.91
PCNX3-201ENST00000355703 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
PCNX3-201ENST00000355703 USP9YO00507 2555 aaPredicted RBP9.37□□□□□ -0.91
PCNX3-201ENST00000355703 Q6ZR54 194 aa9.36□□□□□ -0.91
PCNX3-201ENST00000355703 LAMA2P24043 3122 aaKnown RBP9.35□□□□□ -0.91
PCNX3-201ENST00000355703 Q5VV11 94 aa9.34□□□□□ -0.91
PCNX3-201ENST00000355703 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
PCNX3-201ENST00000355703 A8MU10 97 aa9.32□□□□□ -0.92
PCNX3-201ENST00000355703 ANKRD11Q6UB99 2663 aaPredicted RBP9.3□□□□□ -0.92
PCNX3-201ENST00000355703 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
PCNX3-201ENST00000355703 PANO1I0J062 215 aa9.28□□□□□ -0.92
PCNX3-201ENST00000355703 MGAM2Q2M2H8 2515 aa9.28□□□□□ -0.92
PCNX3-201ENST00000355703 P0C880 135 aa9.27□□□□□ -0.92
PCNX3-201ENST00000355703 EPG5Q9HCE0 2579 aa9.27□□□□□ -0.93
PCNX3-201ENST00000355703 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
PCNX3-201ENST00000355703 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
PCNX3-201ENST00000355703 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
PCNX3-201ENST00000355703 LINC00472Q9H8W2 130 aa9.23□□□□□ -0.93
PCNX3-201ENST00000355703 A0A087X002 238 aa9.22□□□□□ -0.93
PCNX3-201ENST00000355703 LAMA3Q16787 3333 aa9.21□□□□□ -0.93
PCNX3-201ENST00000355703 TNP1P09430 55 aa9.21□□□□□ -0.94
PCNX3-201ENST00000355703 BRCA2P51587 3418 aa9.2□□□□□ -0.94
PCNX3-201ENST00000355703 MKI67P46013 3256 aaKnown RBP9.2□□□□□ -0.94
PCNX3-201ENST00000355703 NDUFAF8A1L188 74 aa9.16□□□□□ -0.94
PCNX3-201ENST00000355703 C5orf42Q9H799 3197 aa9.16□□□□□ -0.94
PCNX3-201ENST00000355703 RANBP2P49792 3224 aaKnown RBP9.14□□□□□ -0.95
PCNX3-201ENST00000355703 HTTP42858 3142 aa9.13□□□□□ -0.95
PCNX3-201ENST00000355703 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
PCNX3-201ENST00000355703 Q5XG85 94 aa9.07□□□□□ -0.96
PCNX3-201ENST00000355703 CHD7Q9P2D1 2997 aa9.05□□□□□ -0.96
PCNX3-201ENST00000355703 UNC80Q8N2C7 3258 aa9.05□□□□□ -0.96
PCNX3-201ENST00000355703 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
PCNX3-201ENST00000355703 SPRR1AP35321 89 aa9.04□□□□□ -0.96
PCNX3-201ENST00000355703 DMBT1Q9UGM3 2413 aaPredicted RBP8.99□□□□□ -0.97
PCNX3-201ENST00000355703 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
PCNX3-201ENST00000355703 HECTD1Q9ULT8 2610 aa8.97□□□□□ -0.97
PCNX3-201ENST00000355703 ATRQ13535 2644 aa8.94□□□□□ -0.98
PCNX3-201ENST00000355703 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
PCNX3-201ENST00000355703 CFAP46Q8IYW2 2715 aa8.94□□□□□ -0.98
PCNX3-201ENST00000355703 CEP295Q9C0D2 2601 aa8.9□□□□□ -0.98
PCNX3-201ENST00000355703 PRUNE2Q8WUY3 3088 aa8.9□□□□□ -0.99
PCNX3-201ENST00000355703 TRIOO75962 3097 aa8.89□□□□□ -0.99
PCNX3-201ENST00000355703 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
PCNX3-201ENST00000355703 CFAP54Q96N23 3096 aa8.84□□□□□ -0.99
PCNX3-201ENST00000355703 FLNBO75369 2602 aaKnown RBP8.82□□□□□ -1
PCNX3-201ENST00000355703 MAST4O15021 2626 aa8.81□□□□□ -1
PCNX3-201ENST00000355703 CHD9Q3L8U1 2897 aa8.8□□□□□ -1
PCNX3-201ENST00000355703 STAB1Q9NY15 2570 aa8.8□□□□□ -1
PCNX3-201ENST00000355703 CDH23Q9H251 3354 aa8.78□□□□□ -1
PCNX3-201ENST00000355703 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
PCNX3-201ENST00000355703 ITPR3Q14573 2671 aa8.75□□□□□ -1.01
PCNX3-201ENST00000355703 PRO2289Q9P1D8 64 aa8.71□□□□□ -1.01
PCNX3-201ENST00000355703 STAB2Q8WWQ8 2551 aa8.71□□□□□ -1.01
PCNX3-201ENST00000355703 DNAH14Q0VDD8 3507 aa8.68□□□□□ -1.02
PCNX3-201ENST00000355703 VPS13AQ96RL7 3174 aa8.68□□□□□ -1.02
PCNX3-201ENST00000355703 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
PCNX3-201ENST00000355703 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
PCNX3-201ENST00000355703 TRANK1O15050 2925 aa8.65□□□□□ -1.02
PCNX3-201ENST00000355703 NBEAL1Q6ZS30 2694 aa8.65□□□□□ -1.02
PCNX3-201ENST00000355703 LAMA1P25391 3075 aa8.65□□□□□ -1.03
PCNX3-201ENST00000355703 VCANP13611 3396 aa8.63□□□□□ -1.03
PCNX3-201ENST00000355703 FLNAP21333 2647 aaKnown RBP8.63□□□□□ -1.03
PCNX3-201ENST00000355703 SPEGQ15772 3267 aa8.61□□□□□ -1.03
PCNX3-201ENST00000355703 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
PCNX3-201ENST00000355703 WDFY4Q6ZS81 3184 aa8.58□□□□□ -1.04
PCNX3-201ENST00000355703 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
PCNX3-201ENST00000355703 NBEAQ8NFP9 2946 aa8.57□□□□□ -1.04
PCNX3-201ENST00000355703 CELSR3Q9NYQ7 3312 aa8.57□□□□□ -1.04
PCNX3-201ENST00000355703 RPS29P62273 56 aaKnown RBP8.57□□□□□ -1.04
PCNX3-201ENST00000355703 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
PCNX3-201ENST00000355703 SZT2Q5T011 3432 aa8.55□□□□□ -1.04
PCNX3-201ENST00000355703 AKAP13Q12802 2813 aa8.54□□□□□ -1.04
PCNX3-201ENST00000355703 A6NN06 94 aa8.49□□□□□ -1.05
PCNX3-201ENST00000355703 TEX15Q9BXT5 2789 aa8.49□□□□□ -1.05
PCNX3-201ENST00000355703 HELZ2Q9BYK8 2649 aaKnown RBP8.48□□□□□ -1.05
PCNX3-201ENST00000355703 FRYQ5TBA9 3013 aa8.48□□□□□ -1.05
PCNX3-201ENST00000355703 DSPP15924 2871 aaKnown RBP8.48□□□□□ -1.05
PCNX3-201ENST00000355703 FRYLO94915 3013 aa8.46□□□□□ -1.06
PCNX3-201ENST00000355703 FREM2Q5SZK8 3169 aa8.46□□□□□ -1.06
PCNX3-201ENST00000355703 XP32Q5T750 250 aa8.45□□□□□ -1.06
PCNX3-201ENST00000355703 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
PCNX3-201ENST00000355703 MAP1AP78559 2803 aaPredicted RBP8.4□□□□□ -1.07
PCNX3-201ENST00000355703 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
PCNX3-201ENST00000355703 MGAQ8IWI9 3026 aa8.38□□□□□ -1.07
PCNX3-201ENST00000355703 SETXQ7Z333 2677 aaKnown RBP8.37□□□□□ -1.07
PCNX3-201ENST00000355703 CRCT1Q9UGL9 99 aa8.37□□□□□ -1.07
PCNX3-201ENST00000355703 EYSQ5T1H1 3165 aa8.36□□□□□ -1.07
PCNX3-201ENST00000355703 USP34Q70CQ2 3546 aa8.33□□□□□ -1.08
PCNX3-201ENST00000355703 CENPEQ02224 2701 aa8.33□□□□□ -1.08
PCNX3-201ENST00000355703 COL6A5A8TX70 2615 aa8.32□□□□□ -1.08
PCNX3-201ENST00000355703 CRYBG3Q68DQ2 2970 aa8.32□□□□□ -1.08
PCNX3-201ENST00000355703 KRTAP7-1Q8IUC3 87 aa8.3□□□□□ -1.08
PCNX3-201ENST00000355703 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
PCNX3-201ENST00000355703 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms