RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
SVIP-201ENST00000354193 Q8NBF4 154 aa6.86□□□□□ -1.31
SVIP-201ENST00000354193 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
SVIP-201ENST00000354193 LOC110117498A0A087WWA1 95 aa6.85□□□□□ -1.31
SVIP-201ENST00000354193 RPL37AP61513 92 aaKnown RBP6.85□□□□□ -1.31
SVIP-201ENST00000354193 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
SVIP-201ENST00000354193 ZNF861PO60384 105 aa6.84□□□□□ -1.31
SVIP-201ENST00000354193 ZNF706Q9Y5V0 76 aaPredicted RBP6.84□□□□□ -1.31
SVIP-201ENST00000354193 NDUFS5O43920 106 aa6.84□□□□□ -1.31
SVIP-201ENST00000354193 CCDC179H3BU77 68 aa6.84□□□□□ -1.32
SVIP-201ENST00000354193 C4orf48Q5BLP8 95 aa6.82□□□□□ -1.32
SVIP-201ENST00000354193 LINC01600Q96MT4 127 aa6.82□□□□□ -1.32
SVIP-201ENST00000354193 DNAH3Q8TD57 4116 aa6.82□□□□□ -1.32
SVIP-201ENST00000354193 ATOX1O00244 68 aa6.81□□□□□ -1.32
SVIP-201ENST00000354193 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
SVIP-201ENST00000354193 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
SVIP-201ENST00000354193 PLAC8Q9NZF1 115 aa6.8□□□□□ -1.32
SVIP-201ENST00000354193 TRBV7-7A0A0K0K1E9 115 aa6.8□□□□□ -1.32
SVIP-201ENST00000354193 IGKV4-1P06312 121 aa6.8□□□□□ -1.32
SVIP-201ENST00000354193 IMUPQ9GZP8 106 aa6.8□□□□□ -1.32
SVIP-201ENST00000354193 ATP5EP2Q5VTU8 51 aa6.8□□□□□ -1.32
SVIP-201ENST00000354193 IGLV5-48A0A075B6I7 105 aa6.79□□□□□ -1.32
SVIP-201ENST00000354193 LCE6AA0A183 80 aa6.79□□□□□ -1.32
SVIP-201ENST00000354193 SPRR4Q96PI1 79 aa6.79□□□□□ -1.32
SVIP-201ENST00000354193 NDUFB1O75438 58 aa6.79□□□□□ -1.32
SVIP-201ENST00000354193 SMIM29Q86T20 159 aa6.79□□□□□ -1.32
SVIP-201ENST00000354193 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
SVIP-201ENST00000354193 PLA2G1BP04054 148 aaKnown RBP6.77□□□□□ -1.33
SVIP-201ENST00000354193 Q6Q795 121 aa6.77□□□□□ -1.33
SVIP-201ENST00000354193 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
SVIP-201ENST00000354193 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
SVIP-201ENST00000354193 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
SVIP-201ENST00000354193 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
SVIP-201ENST00000354193 K7EQZ3 153 aa6.75□□□□□ -1.33
SVIP-201ENST00000354193 CRYGAP11844 174 aa6.73□□□□□ -1.33
SVIP-201ENST00000354193 CXCL6P80162 114 aa6.71□□□□□ -1.34
SVIP-201ENST00000354193 LINC00336Q6ZUF6 198 aa6.71□□□□□ -1.34
SVIP-201ENST00000354193 SERP2Q8N6R1 65 aa6.71□□□□□ -1.34
SVIP-201ENST00000354193 TYMSOSQ8TAI1 123 aa6.7□□□□□ -1.34
SVIP-201ENST00000354193 RETNLBQ9BQ08 111 aa6.7□□□□□ -1.34
SVIP-201ENST00000354193 UQCRQO14949 82 aa6.69□□□□□ -1.34
SVIP-201ENST00000354193 COX7CP15954 63 aa6.69□□□□□ -1.34
SVIP-201ENST00000354193 PRR4Q16378 134 aa6.69□□□□□ -1.34
SVIP-201ENST00000354193 CASC2Q6XLA1 102 aa6.67□□□□□ -1.34
SVIP-201ENST00000354193 PRR26Q8N8Z3 221 aa6.67□□□□□ -1.34
SVIP-201ENST00000354193 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
SVIP-201ENST00000354193 A0A087X002 238 aa6.66□□□□□ -1.34
SVIP-201ENST00000354193 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
SVIP-201ENST00000354193 DSCR10P59022 87 aa6.64□□□□□ -1.35
SVIP-201ENST00000354193 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
SVIP-201ENST00000354193 KRTAP13-1Q8IUC0 172 aa6.63□□□□□ -1.35
SVIP-201ENST00000354193 SPRR1BP22528 89 aa6.62□□□□□ -1.35
SVIP-201ENST00000354193 TRAV7A0A075B6U4 112 aa6.62□□□□□ -1.35
SVIP-201ENST00000354193 MP68P56378 58 aa6.61□□□□□ -1.35
SVIP-201ENST00000354193 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
SVIP-201ENST00000354193 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
SVIP-201ENST00000354193 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
SVIP-201ENST00000354193 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
SVIP-201ENST00000354193 A8MWP4 228 aa6.58□□□□□ -1.36
SVIP-201ENST00000354193 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
SVIP-201ENST00000354193 A0A1B0GW54 56 aa6.58□□□□□ -1.36
SVIP-201ENST00000354193 SSBP3-AS1Q7Z2R9 100 aa6.58□□□□□ -1.36
SVIP-201ENST00000354193 PRR15Q8IV56 129 aa6.58□□□□□ -1.36
SVIP-201ENST00000354193 TMEM254Q8TBM7 123 aa6.58□□□□□ -1.36
SVIP-201ENST00000354193 IGLV8-61A0A075B6I0 122 aa6.57□□□□□ -1.36
SVIP-201ENST00000354193 J3KT08 172 aa6.56□□□□□ -1.36
SVIP-201ENST00000354193 PCOTHQ58A44 107 aa6.56□□□□□ -1.36
SVIP-201ENST00000354193 Q6ZSA8 131 aa6.55□□□□□ -1.36
SVIP-201ENST00000354193 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
SVIP-201ENST00000354193 CYSTM1Q9H1C7 97 aa6.54□□□□□ -1.36
SVIP-201ENST00000354193 HYDINQ4G0P3 5121 aa6.53□□□□□ -1.36
SVIP-201ENST00000354193 LINC00472Q9H8W2 130 aa6.53□□□□□ -1.36
SVIP-201ENST00000354193 H0Y9P7 68 aa6.53□□□□□ -1.36
SVIP-201ENST00000354193 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
SVIP-201ENST00000354193 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
SVIP-201ENST00000354193 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
SVIP-201ENST00000354193 LIMD2Q9BT23 127 aa6.52□□□□□ -1.37
SVIP-201ENST00000354193 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
SVIP-201ENST00000354193 A0A1B0GVX0 72 aa6.51□□□□□ -1.37
SVIP-201ENST00000354193 Q5VSD8 79 aa6.5□□□□□ -1.37
SVIP-201ENST00000354193 DNAH2Q9P225 4427 aa6.5□□□□□ -1.37
SVIP-201ENST00000354193 NOTCH2NLQ7Z3S9 236 aa6.5□□□□□ -1.37
SVIP-201ENST00000354193 LINC00313P59037 77 aa6.49□□□□□ -1.37
SVIP-201ENST00000354193 FAM236DA0A1B0GTK5 79 aa6.49□□□□□ -1.37
SVIP-201ENST00000354193 FAM236CP0DP71 79 aa6.49□□□□□ -1.37
SVIP-201ENST00000354193 Q96NJ1 140 aa6.48□□□□□ -1.37
SVIP-201ENST00000354193 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
SVIP-201ENST00000354193 C1orf64Q8NEQ6 169 aa6.47□□□□□ -1.37
SVIP-201ENST00000354193 IGKV2D-30A0A075B6S6 120 aa6.46□□□□□ -1.38
SVIP-201ENST00000354193 IGKV2-30P06310 120 aa6.46□□□□□ -1.38
SVIP-201ENST00000354193 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
SVIP-201ENST00000354193 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
SVIP-201ENST00000354193 FAT1Q14517 4588 aa6.44□□□□□ -1.38
SVIP-201ENST00000354193 DNAH5Q8TE73 4624 aa6.44□□□□□ -1.38
SVIP-201ENST00000354193 KMT2CQ8NEZ4 4911 aaKnown RBP6.44□□□□□ -1.38
SVIP-201ENST00000354193 FAM229BQ4G0N7 80 aa6.44□□□□□ -1.38
SVIP-201ENST00000354193 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
SVIP-201ENST00000354193 TRAV22A0A0B4J277 110 aa6.44□□□□□ -1.38
SVIP-201ENST00000354193 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
SVIP-201ENST00000354193 C1orf195Q5TG92 126 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms