RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 PLAC8Q9NZF1 115 aa4.52□□□□□ -1.69
KNL1-201ENST00000346991 BAHCC1Q9P281 2608 aa4.51□□□□□ -1.69
KNL1-201ENST00000346991 UNC79Q9P2D8 2635 aa4.51□□□□□ -1.69
KNL1-201ENST00000346991 Q5W150 140 aa4.5□□□□□ -1.69
KNL1-201ENST00000346991 NOTCH1P46531 2555 aa4.49□□□□□ -1.69
KNL1-201ENST00000346991 TEX15Q9BXT5 2789 aa4.48□□□□□ -1.69
KNL1-201ENST00000346991 COL6A5A8TX70 2615 aa4.48□□□□□ -1.69
KNL1-201ENST00000346991 ASB16-AS1Q495Z4 193 aa4.48□□□□□ -1.69
KNL1-201ENST00000346991 ADM2Q7Z4H4 148 aa4.47□□□□□ -1.69
KNL1-201ENST00000346991 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
KNL1-201ENST00000346991 MMP24-AS1A0A0U1RRL7 71 aa4.46□□□□□ -1.7
KNL1-201ENST00000346991 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
KNL1-201ENST00000346991 KRTAP10-3P60369 221 aa4.45□□□□□ -1.7
KNL1-201ENST00000346991 EIF4EBP3O60516 100 aaPredicted RBP4.43□□□□□ -1.7
KNL1-201ENST00000346991 CHD6Q8TD26 2715 aa4.43□□□□□ -1.7
KNL1-201ENST00000346991 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
KNL1-201ENST00000346991 PANO1I0J062 215 aa4.41□□□□□ -1.7
KNL1-201ENST00000346991 CENPFP49454 3210 aa4.41□□□□□ -1.7
KNL1-201ENST00000346991 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
KNL1-201ENST00000346991 A0A096LNT2 108 aa4.4□□□□□ -1.7
KNL1-201ENST00000346991 LCE6AA0A183 80 aa4.39□□□□□ -1.71
KNL1-201ENST00000346991 Q5VV11 94 aa4.39□□□□□ -1.71
KNL1-201ENST00000346991 Q8NDZ9 215 aa4.39□□□□□ -1.71
KNL1-201ENST00000346991 TEP1Q99973 2627 aaKnown RBP4.39□□□□□ -1.71
KNL1-201ENST00000346991 SETXQ7Z333 2677 aaKnown RBP4.38□□□□□ -1.71
KNL1-201ENST00000346991 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
KNL1-201ENST00000346991 SPRR1BP22528 89 aa4.37□□□□□ -1.71
KNL1-201ENST00000346991 ITPR2Q14571 2701 aa4.35□□□□□ -1.71
KNL1-201ENST00000346991 SPRR1AP35321 89 aa4.35□□□□□ -1.71
KNL1-201ENST00000346991 A8MUU9 505 aa4.34□□□□□ -1.71
KNL1-201ENST00000346991 TNP1P09430 55 aa4.33□□□□□ -1.72
KNL1-201ENST00000346991 GCN1Q92616 2671 aaKnown RBP4.33□□□□□ -1.72
KNL1-201ENST00000346991 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
KNL1-201ENST00000346991 Q6ZR54 194 aa4.31□□□□□ -1.72
KNL1-201ENST00000346991 IGSF10Q6WRI0 2623 aa4.31□□□□□ -1.72
KNL1-201ENST00000346991 KRTAP1-3Q8IUG1 177 aa4.29□□□□□ -1.72
KNL1-201ENST00000346991 KRTAP26-1Q6PEX3 210 aa4.28□□□□□ -1.72
KNL1-201ENST00000346991 KRTAP1-1Q07627 177 aa4.27□□□□□ -1.73
KNL1-201ENST00000346991 P0C880 135 aa4.27□□□□□ -1.73
KNL1-201ENST00000346991 KRTAP10-1P60331 282 aa4.27□□□□□ -1.73
KNL1-201ENST00000346991 Q5XG85 94 aa4.26□□□□□ -1.73
KNL1-201ENST00000346991 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
KNL1-201ENST00000346991 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
KNL1-201ENST00000346991 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
KNL1-201ENST00000346991 NSD1Q96L73 2696 aaPredicted RBP4.25□□□□□ -1.73
KNL1-201ENST00000346991 ZNF292O60281 2723 aa4.22□□□□□ -1.73
KNL1-201ENST00000346991 KRTAP10-2P60368 255 aa4.22□□□□□ -1.73
KNL1-201ENST00000346991 APCP25054 2843 aa4.21□□□□□ -1.74
KNL1-201ENST00000346991 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
KNL1-201ENST00000346991 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
KNL1-201ENST00000346991 KRTAP1-5Q9BYS1 174 aa4.15□□□□□ -1.74
KNL1-201ENST00000346991 A0A087X002 238 aa4.14□□□□□ -1.75
KNL1-201ENST00000346991 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
KNL1-201ENST00000346991 CEP350Q5VT06 3117 aa4.12□□□□□ -1.75
KNL1-201ENST00000346991 MAP1AP78559 2803 aaPredicted RBP4.1□□□□□ -1.75
KNL1-201ENST00000346991 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
KNL1-201ENST00000346991 A8MU10 97 aa4.09□□□□□ -1.75
KNL1-201ENST00000346991 UTP20O75691 2785 aaKnown RBP4.09□□□□□ -1.76
KNL1-201ENST00000346991 CYSTM1Q9H1C7 97 aa4.08□□□□□ -1.76
KNL1-201ENST00000346991 KRTAP4-16G5E9R7 235 aaPredicted RBP4.07□□□□□ -1.76
KNL1-201ENST00000346991 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
KNL1-201ENST00000346991 Q6ZRN7 208 aaPredicted RBP4.07□□□□□ -1.76
KNL1-201ENST00000346991 A6NN06 94 aa4.06□□□□□ -1.76
KNL1-201ENST00000346991 NBEAL2Q6ZNJ1 2754 aa4.04□□□□□ -1.76
KNL1-201ENST00000346991 EP400Q96L91 3159 aa4.04□□□□□ -1.76
KNL1-201ENST00000346991 UBR5O95071 2799 aaPredicted RBP4.03□□□□□ -1.76
KNL1-201ENST00000346991 KRTAP11-1Q8IUC1 163 aa4.02□□□□□ -1.77
KNL1-201ENST00000346991 C5orf42Q9H799 3197 aa4□□□□□ -1.77
KNL1-201ENST00000346991 TENM3Q9P273 2699 aa4□□□□□ -1.77
KNL1-201ENST00000346991 KRTAP10-10P60014 251 aa3.98□□□□□ -1.77
KNL1-201ENST00000346991 KRTAP21-3Q3LHN1 58 aa3.98□□□□□ -1.77
KNL1-201ENST00000346991 SRCAPQ6ZRS2 3230 aa3.97□□□□□ -1.77
KNL1-201ENST00000346991 TENM1Q9UKZ4 2725 aa3.97□□□□□ -1.77
KNL1-201ENST00000346991 FLNCQ14315 2725 aa3.95□□□□□ -1.78
KNL1-201ENST00000346991 KRTAP13-2Q52LG2 175 aa3.94□□□□□ -1.78
KNL1-201ENST00000346991 TPRXLQ17RH7 258 aa3.93□□□□□ -1.78
KNL1-201ENST00000346991 DNAH12Q6ZR08 3092 aa3.92□□□□□ -1.78
KNL1-201ENST00000346991 ITPR1Q14643 2758 aa3.92□□□□□ -1.78
KNL1-201ENST00000346991 TRANK1O15050 2925 aa3.9□□□□□ -1.78
KNL1-201ENST00000346991 A0A1B0GVY2 172 aa3.9□□□□□ -1.79
KNL1-201ENST00000346991 A0A0C4DFX4 3053 aa3.9□□□□□ -1.79
KNL1-201ENST00000346991 XP32Q5T750 250 aa3.88□□□□□ -1.79
KNL1-201ENST00000346991 KRTAP13-1Q8IUC0 172 aa3.88□□□□□ -1.79
KNL1-201ENST00000346991 CRYBG3Q68DQ2 2970 aa3.87□□□□□ -1.79
KNL1-201ENST00000346991 LAMA2P24043 3122 aaKnown RBP3.87□□□□□ -1.79
KNL1-201ENST00000346991 CFAP54Q96N23 3096 aa3.86□□□□□ -1.79
KNL1-201ENST00000346991 FRYQ5TBA9 3013 aa3.86□□□□□ -1.79
KNL1-201ENST00000346991 PCNTO95613 3336 aa3.85□□□□□ -1.79
KNL1-201ENST00000346991 HIVEP1P15822 2718 aa3.85□□□□□ -1.79
KNL1-201ENST00000346991 CHD9Q3L8U1 2897 aa3.84□□□□□ -1.79
KNL1-201ENST00000346991 DSPP15924 2871 aaKnown RBP3.84□□□□□ -1.79
KNL1-201ENST00000346991 NF1P21359 2839 aa3.84□□□□□ -1.8
KNL1-201ENST00000346991 KALRNO60229 2985 aa3.83□□□□□ -1.8
KNL1-201ENST00000346991 MGAQ8IWI9 3026 aa3.82□□□□□ -1.8
KNL1-201ENST00000346991 TRIOO75962 3097 aa3.8□□□□□ -1.8
KNL1-201ENST00000346991 LRBAP50851 2863 aa3.79□□□□□ -1.8
KNL1-201ENST00000346991 H0YAA0 97 aa3.78□□□□□ -1.8
KNL1-201ENST00000346991 TGP01266 2768 aa3.77□□□□□ -1.81
KNL1-201ENST00000346991 GOLGB1Q14789 3259 aaKnown RBP3.76□□□□□ -1.81
KNL1-201ENST00000346991 FRYLO94915 3013 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms