RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 GHRHP01286 108 aa8.32□□□□□ -1.08
CDC42-202ENST00000344548 SCXQ7RTU7 201 aa8.31□□□□□ -1.08
CDC42-202ENST00000344548 Q6ZSA8 131 aa8.3□□□□□ -1.08
CDC42-202ENST00000344548 C1orf137Q5JT78 98 aa8.28□□□□□ -1.08
CDC42-202ENST00000344548 LINC00643Q86TS7 51 aa8.26□□□□□ -1.09
CDC42-202ENST00000344548 A0A1W2PNM2 257 aa8.26□□□□□ -1.09
CDC42-202ENST00000344548 PDE6GP18545 87 aa8.24□□□□□ -1.09
CDC42-202ENST00000344548 IGKV3D-7A0A0C4DH55 119 aa8.24□□□□□ -1.09
CDC42-202ENST00000344548 DYNC1H1Q14204 4646 aaKnown RBP8.23□□□□□ -1.09
CDC42-202ENST00000344548 SPRR1BP22528 89 aa8.23□□□□□ -1.09
CDC42-202ENST00000344548 ANAPC11Q9NYG5 84 aa8.23□□□□□ -1.09
CDC42-202ENST00000344548 A0A1B0GVY2 172 aa8.22□□□□□ -1.09
CDC42-202ENST00000344548 ZNF861PO60384 105 aa8.22□□□□□ -1.09
CDC42-202ENST00000344548 IGFL1Q6UW32 110 aa8.22□□□□□ -1.09
CDC42-202ENST00000344548 Q6ZVQ6 151 aa8.22□□□□□ -1.09
CDC42-202ENST00000344548 TRBV7-7A0A0K0K1E9 115 aa8.2□□□□□ -1.1
CDC42-202ENST00000344548 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
CDC42-202ENST00000344548 IGLV7-43P04211 117 aa8.2□□□□□ -1.1
CDC42-202ENST00000344548 VPS13BQ7Z7G8 4022 aa8.19□□□□□ -1.1
CDC42-202ENST00000344548 RYR3Q15413 4870 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 Q6JHZ5 121 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 UBL5Q9BZL1 73 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 IGLV8-61A0A075B6I0 122 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 F8WEM9 126 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 Q8NBF4 154 aa8.18□□□□□ -1.1
CDC42-202ENST00000344548 A0A087WVE0 104 aa8.16□□□□□ -1.1
CDC42-202ENST00000344548 Q6Q795 121 aa8.16□□□□□ -1.1
CDC42-202ENST00000344548 IGLV9-49A0A0B4J1Y8 123 aa8.15□□□□□ -1.1
CDC42-202ENST00000344548 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
CDC42-202ENST00000344548 APOBP04114 4563 aaKnown RBP8.13□□□□□ -1.11
CDC42-202ENST00000344548 CRYGAP11844 174 aa8.13□□□□□ -1.11
CDC42-202ENST00000344548 IMUPQ9GZP8 106 aa8.12□□□□□ -1.11
CDC42-202ENST00000344548 FAT1Q14517 4588 aa8.12□□□□□ -1.11
CDC42-202ENST00000344548 NREPQ16612 68 aa8.1□□□□□ -1.11
CDC42-202ENST00000344548 FAM236AA0A1B0GUQ0 79 aa8.1□□□□□ -1.11
CDC42-202ENST00000344548 FAM236BA0A1B0GV22 79 aa8.1□□□□□ -1.11
CDC42-202ENST00000344548 HIST1H4AP62805 103 aaKnown RBP8.1□□□□□ -1.11
CDC42-202ENST00000344548 A0A087WSZ3 146 aa8.09□□□□□ -1.11
CDC42-202ENST00000344548 SMR3BP02814 79 aaPredicted RBP8.09□□□□□ -1.11
CDC42-202ENST00000344548 Q8N9L7 120 aa8.09□□□□□ -1.11
CDC42-202ENST00000344548 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
CDC42-202ENST00000344548 MOBPQ13875 183 aa8.08□□□□□ -1.12
CDC42-202ENST00000344548 ZNF706Q9Y5V0 76 aaPredicted RBP8.08□□□□□ -1.12
CDC42-202ENST00000344548 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
CDC42-202ENST00000344548 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
CDC42-202ENST00000344548 CXCL6P80162 114 aa8.05□□□□□ -1.12
CDC42-202ENST00000344548 HRCT1Q6UXD1 115 aa8.05□□□□□ -1.12
CDC42-202ENST00000344548 A0A087X002 238 aa8.05□□□□□ -1.12
CDC42-202ENST00000344548 A0A1B0GW54 56 aa8.05□□□□□ -1.12
CDC42-202ENST00000344548 BPY2O14599 106 aa8.04□□□□□ -1.12
CDC42-202ENST00000344548 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
CDC42-202ENST00000344548 DSCR10P59022 87 aa8.02□□□□□ -1.13
CDC42-202ENST00000344548 KRTAP13-2Q52LG2 175 aa8.01□□□□□ -1.13
CDC42-202ENST00000344548 ANAPC13Q9BS18 74 aa8.01□□□□□ -1.13
CDC42-202ENST00000344548 IGKV4-1P06312 121 aa8□□□□□ -1.13
CDC42-202ENST00000344548 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
CDC42-202ENST00000344548 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
CDC42-202ENST00000344548 K7EQZ3 153 aa7.98□□□□□ -1.13
CDC42-202ENST00000344548 LINC00472Q9H8W2 130 aa7.97□□□□□ -1.13
CDC42-202ENST00000344548 Q96NJ1 140 aa7.95□□□□□ -1.14
CDC42-202ENST00000344548 HSPG2P98160 4391 aa7.94□□□□□ -1.14
CDC42-202ENST00000344548 CCDC179H3BU77 68 aa7.93□□□□□ -1.14
CDC42-202ENST00000344548 KRTAP17-1Q9BYP8 105 aa7.92□□□□□ -1.14
CDC42-202ENST00000344548 PLA2G1BP04054 148 aaKnown RBP7.92□□□□□ -1.14
CDC42-202ENST00000344548 SPINK6Q6UWN8 80 aa7.91□□□□□ -1.14
CDC42-202ENST00000344548 SSBP3-AS1Q7Z2R9 100 aa7.91□□□□□ -1.14
CDC42-202ENST00000344548 ATOX1O00244 68 aa7.9□□□□□ -1.14
CDC42-202ENST00000344548 EPPK1P58107 5090 aaKnown RBP7.9□□□□□ -1.14
CDC42-202ENST00000344548 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.15
CDC42-202ENST00000344548 PRR26Q8N8Z3 221 aa7.87□□□□□ -1.15
CDC42-202ENST00000344548 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
CDC42-202ENST00000344548 A8MWP4 228 aa7.85□□□□□ -1.15
CDC42-202ENST00000344548 C5orf47Q569G3 176 aa7.84□□□□□ -1.15
CDC42-202ENST00000344548 PRR15Q8IV56 129 aa7.84□□□□□ -1.15
CDC42-202ENST00000344548 SERP2Q8N6R1 65 aa7.84□□□□□ -1.15
CDC42-202ENST00000344548 RYR1P21817 5038 aa7.84□□□□□ -1.15
CDC42-202ENST00000344548 COX7CP15954 63 aa7.83□□□□□ -1.16
CDC42-202ENST00000344548 CD164Q04900 197 aa7.83□□□□□ -1.16
CDC42-202ENST00000344548 SS18L2Q9UHA2 77 aa7.83□□□□□ -1.16
CDC42-202ENST00000344548 WFDC13Q8IUB5 93 aa7.82□□□□□ -1.16
CDC42-202ENST00000344548 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
CDC42-202ENST00000344548 CYSTM1Q9H1C7 97 aa7.82□□□□□ -1.16
CDC42-202ENST00000344548 LRP1Q07954 4544 aaKnown RBP7.81□□□□□ -1.16
CDC42-202ENST00000344548 PKHD1L1Q86WI1 4243 aa7.81□□□□□ -1.16
CDC42-202ENST00000344548 HCG22E2RYF7 251 aa7.81□□□□□ -1.16
CDC42-202ENST00000344548 NOTCH2NLQ7Z3S9 236 aa7.8□□□□□ -1.16
CDC42-202ENST00000344548 UQCRQO14949 82 aa7.8□□□□□ -1.16
CDC42-202ENST00000344548 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
CDC42-202ENST00000344548 KRTAP29-1A8MX34 341 aaPredicted RBP7.79□□□□□ -1.16
CDC42-202ENST00000344548 CDK2AP2O75956 126 aa7.79□□□□□ -1.16
CDC42-202ENST00000344548 J3KT08 172 aa7.78□□□□□ -1.16
CDC42-202ENST00000344548 Q5VSD8 79 aa7.78□□□□□ -1.16
CDC42-202ENST00000344548 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
CDC42-202ENST00000344548 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
CDC42-202ENST00000344548 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.17
CDC42-202ENST00000344548 C1orf195Q5TG92 126 aa7.76□□□□□ -1.17
CDC42-202ENST00000344548 IGHV6-1A0A0B4J1U7 121 aa7.76□□□□□ -1.17
CDC42-202ENST00000344548 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms