RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 SMIM29Q86T20 159 aa13.44□□□□□ -0.26
CACNB1-201ENST00000344140 ZNF706Q9Y5V0 76 aaPredicted RBP13.42□□□□□ -0.26
CACNB1-201ENST00000344140 F8WEM9 126 aa13.42□□□□□ -0.26
CACNB1-201ENST00000344140 CDIP1Q9H305 208 aa13.41□□□□□ -0.26
CACNB1-201ENST00000344140 DYNC1H1Q14204 4646 aaKnown RBP13.4□□□□□ -0.26
CACNB1-201ENST00000344140 SPRR4Q96PI1 79 aa13.39□□□□□ -0.27
CACNB1-201ENST00000344140 PCP4P48539 62 aa13.38□□□□□ -0.27
CACNB1-201ENST00000344140 LRP1BQ9NZR2 4599 aa13.38□□□□□ -0.27
CACNB1-201ENST00000344140 SRRM2Q9UQ35 2752 aaKnown RBP13.37□□□□□ -0.27
CACNB1-201ENST00000344140 LINC00483Q53H64 154 aa13.35□□□□□ -0.27
CACNB1-201ENST00000344140 IGLV8-61A0A075B6I0 122 aa13.34□□□□□ -0.27
CACNB1-201ENST00000344140 XGP55808 180 aa13.34□□□□□ -0.27
CACNB1-201ENST00000344140 EPPK1P58107 5090 aaKnown RBP13.33□□□□□ -0.28
CACNB1-201ENST00000344140 SIGMAR1Q99720 223 aa13.33□□□□□ -0.28
CACNB1-201ENST00000344140 LINC00846Q9NV44 126 aa13.31□□□□□ -0.28
CACNB1-201ENST00000344140 Q6JHZ5 121 aa13.27□□□□□ -0.28
CACNB1-201ENST00000344140 A0A1B0GW54 56 aa13.26□□□□□ -0.29
CACNB1-201ENST00000344140 RPL37AP61513 92 aaKnown RBP13.25□□□□□ -0.29
CACNB1-201ENST00000344140 IGFL1Q6UW32 110 aa13.25□□□□□ -0.29
CACNB1-201ENST00000344140 LINC00643Q86TS7 51 aa13.25□□□□□ -0.29
CACNB1-201ENST00000344140 Q8NBF4 154 aa13.25□□□□□ -0.29
CACNB1-201ENST00000344140 A0A1W2PNM2 257 aa13.23□□□□□ -0.29
CACNB1-201ENST00000344140 UBL5Q9BZL1 73 aa13.23□□□□□ -0.29
CACNB1-201ENST00000344140 CDK2AP2O75956 126 aa13.23□□□□□ -0.29
CACNB1-201ENST00000344140 APOBP04114 4563 aaKnown RBP13.22□□□□□ -0.29
CACNB1-201ENST00000344140 IGLV9-49A0A0B4J1Y8 123 aa13.2□□□□□ -0.3
CACNB1-201ENST00000344140 MT-ATP8P03928 68 aa13.2□□□□□ -0.3
CACNB1-201ENST00000344140 SMR3BP02814 79 aaPredicted RBP13.19□□□□□ -0.3
CACNB1-201ENST00000344140 SCGB1A1P11684 91 aa13.19□□□□□ -0.3
CACNB1-201ENST00000344140 C9orf153Q5TBE3 101 aa13.19□□□□□ -0.3
CACNB1-201ENST00000344140 ANAPC11Q9NYG5 84 aa13.19□□□□□ -0.3
CACNB1-201ENST00000344140 CRYGAP11844 174 aa13.18□□□□□ -0.3
CACNB1-201ENST00000344140 VPS13BQ7Z7G8 4022 aa13.16□□□□□ -0.3
CACNB1-201ENST00000344140 A0A0G2JQZ4 141 aa13.15□□□□□ -0.3
CACNB1-201ENST00000344140 Q6ZVQ6 151 aa13.14□□□□□ -0.31
CACNB1-201ENST00000344140 Q6Q795 121 aa13.14□□□□□ -0.31
CACNB1-201ENST00000344140 SPINK6Q6UWN8 80 aa13.14□□□□□ -0.31
CACNB1-201ENST00000344140 MOBPQ13875 183 aa13.13□□□□□ -0.31
CACNB1-201ENST00000344140 FAM229BQ4G0N7 80 aa13.12□□□□□ -0.31
CACNB1-201ENST00000344140 ATP5EP2Q5VTU8 51 aa13.11□□□□□ -0.31
CACNB1-201ENST00000344140 NREPQ16612 68 aa13.1□□□□□ -0.31
CACNB1-201ENST00000344140 TRBV7-7A0A0K0K1E9 115 aa13.08□□□□□ -0.32
CACNB1-201ENST00000344140 KRTAP1-4P0C5Y4 121 aa13.06□□□□□ -0.32
CACNB1-201ENST00000344140 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
CACNB1-201ENST00000344140 KRTAP10-4P60372 401 aaPredicted RBP13.06□□□□□ -0.32
CACNB1-201ENST00000344140 SSBP3-AS1Q7Z2R9 100 aa13.06□□□□□ -0.32
CACNB1-201ENST00000344140 HSPG2P98160 4391 aa13.05□□□□□ -0.32
CACNB1-201ENST00000344140 IGKV3D-7A0A0C4DH55 119 aa13.05□□□□□ -0.32
CACNB1-201ENST00000344140 BIRC6Q9NR09 4857 aa13.05□□□□□ -0.32
CACNB1-201ENST00000344140 A0A087WSZ3 146 aa13.04□□□□□ -0.32
CACNB1-201ENST00000344140 FAM229AH3BQW9 127 aa13.03□□□□□ -0.32
CACNB1-201ENST00000344140 RYR1P21817 5038 aa13.03□□□□□ -0.32
CACNB1-201ENST00000344140 KIAA1109Q2LD37 5005 aa13.02□□□□□ -0.32
CACNB1-201ENST00000344140 PLA2G1BP04054 148 aaKnown RBP13.02□□□□□ -0.32
CACNB1-201ENST00000344140 A0A087X002 238 aa13.02□□□□□ -0.33
CACNB1-201ENST00000344140 CXCL6P80162 114 aa13.02□□□□□ -0.33
CACNB1-201ENST00000344140 KRTAP13-2Q52LG2 175 aa12.98□□□□□ -0.33
CACNB1-201ENST00000344140 Q5VSD8 79 aa12.97□□□□□ -0.33
CACNB1-201ENST00000344140 FAT1Q14517 4588 aa12.97□□□□□ -0.33
CACNB1-201ENST00000344140 BPY2O14599 106 aa12.96□□□□□ -0.33
CACNB1-201ENST00000344140 CD164Q04900 197 aa12.96□□□□□ -0.33
CACNB1-201ENST00000344140 Q8N1X5 172 aa12.96□□□□□ -0.33
CACNB1-201ENST00000344140 HRCT1Q6UXD1 115 aa12.95□□□□□ -0.34
CACNB1-201ENST00000344140 SS18L2Q9UHA2 77 aa12.93□□□□□ -0.34
CACNB1-201ENST00000344140 HIST1H4AP62805 103 aaKnown RBP12.91□□□□□ -0.34
CACNB1-201ENST00000344140 TYMSOSQ8TAI1 123 aa12.88□□□□□ -0.35
CACNB1-201ENST00000344140 KRTAP17-1Q9BYP8 105 aa12.88□□□□□ -0.35
CACNB1-201ENST00000344140 LINC00472Q9H8W2 130 aa12.86□□□□□ -0.35
CACNB1-201ENST00000344140 PRR26Q8N8Z3 221 aa12.83□□□□□ -0.36
CACNB1-201ENST00000344140 A0A087WVE0 104 aa12.82□□□□□ -0.36
CACNB1-201ENST00000344140 DSCR10P59022 87 aa12.82□□□□□ -0.36
CACNB1-201ENST00000344140 J3KT08 172 aa12.81□□□□□ -0.36
CACNB1-201ENST00000344140 DEFB116Q30KQ4 102 aa12.81□□□□□ -0.36
CACNB1-201ENST00000344140 FAM236AA0A1B0GUQ0 79 aa12.8□□□□□ -0.36
CACNB1-201ENST00000344140 FAM236BA0A1B0GV22 79 aa12.8□□□□□ -0.36
CACNB1-201ENST00000344140 C4orf48Q5BLP8 95 aa12.8□□□□□ -0.36
CACNB1-201ENST00000344140 IGKV4-1P06312 121 aa12.79□□□□□ -0.36
CACNB1-201ENST00000344140 Q8N9L7 120 aa12.79□□□□□ -0.36
CACNB1-201ENST00000344140 Q5XG85 94 aa12.78□□□□□ -0.36
CACNB1-201ENST00000344140 Q96NJ1 140 aa12.78□□□□□ -0.36
CACNB1-201ENST00000344140 ASB16-AS1Q495Z4 193 aa12.76□□□□□ -0.37
CACNB1-201ENST00000344140 ANAPC13Q9BS18 74 aa12.76□□□□□ -0.37
CACNB1-201ENST00000344140 HERC2O95714 4834 aa12.76□□□□□ -0.37
CACNB1-201ENST00000344140 K7EQZ3 153 aa12.74□□□□□ -0.37
CACNB1-201ENST00000344140 SPINK1P00995 79 aa12.74□□□□□ -0.37
CACNB1-201ENST00000344140 SPAG11AQ6PDA7 123 aa12.74□□□□□ -0.37
CACNB1-201ENST00000344140 LIMD2Q9BT23 127 aa12.74□□□□□ -0.37
CACNB1-201ENST00000344140 A8MWP4 228 aa12.73□□□□□ -0.37
CACNB1-201ENST00000344140 LINC00304Q8N9R0 145 aa12.73□□□□□ -0.37
CACNB1-201ENST00000344140 KRTAP4-5Q9BYR2 181 aa12.72□□□□□ -0.37
CACNB1-201ENST00000344140 PKHD1L1Q86WI1 4243 aa12.72□□□□□ -0.37
CACNB1-201ENST00000344140 NDUFB1O75438 58 aa12.69□□□□□ -0.38
CACNB1-201ENST00000344140 RPS29P62273 56 aaKnown RBP12.68□□□□□ -0.38
CACNB1-201ENST00000344140 PRR15Q8IV56 129 aa12.68□□□□□ -0.38
CACNB1-201ENST00000344140 ATOX1O00244 68 aa12.67□□□□□ -0.38
CACNB1-201ENST00000344140 C1orf195Q5TG92 126 aa12.61□□□□□ -0.39
CACNB1-201ENST00000344140 HCG22E2RYF7 251 aa12.61□□□□□ -0.39
CACNB1-201ENST00000344140 A0A1B0GVX0 72 aa12.58□□□□□ -0.4
CACNB1-201ENST00000344140 KRTAP10-8P60410 259 aa12.57□□□□□ -0.4
CACNB1-201ENST00000344140 SMIM20Q8N5G0 67 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms