RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 XGP55808 180 aa12.91□□□□□ -0.34
VRK2-201ENST00000340157 SPRR1BP22528 89 aa12.9□□□□□ -0.34
VRK2-201ENST00000340157 ZNF861PO60384 105 aa12.89□□□□□ -0.35
VRK2-201ENST00000340157 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
VRK2-201ENST00000340157 IGLV7-43P04211 117 aa12.87□□□□□ -0.35
VRK2-201ENST00000340157 PDE6GP18545 87 aa12.87□□□□□ -0.35
VRK2-201ENST00000340157 MT-ATP8P03928 68 aa12.85□□□□□ -0.35
VRK2-201ENST00000340157 SPRR4Q96PI1 79 aa12.84□□□□□ -0.35
VRK2-201ENST00000340157 VPS13BQ7Z7G8 4022 aa12.83□□□□□ -0.35
VRK2-201ENST00000340157 SIGMAR1Q99720 223 aa12.81□□□□□ -0.36
VRK2-201ENST00000340157 APOBP04114 4563 aaKnown RBP12.81□□□□□ -0.36
VRK2-201ENST00000340157 IGLV8-61A0A075B6I0 122 aa12.8□□□□□ -0.36
VRK2-201ENST00000340157 LINC00483Q53H64 154 aa12.8□□□□□ -0.36
VRK2-201ENST00000340157 F8WEM9 126 aa12.79□□□□□ -0.36
VRK2-201ENST00000340157 A0A0G2JQZ4 141 aa12.78□□□□□ -0.36
VRK2-201ENST00000340157 A0A1W2PNM2 257 aa12.78□□□□□ -0.36
VRK2-201ENST00000340157 IGFL1Q6UW32 110 aa12.76□□□□□ -0.37
VRK2-201ENST00000340157 LINC00643Q86TS7 51 aa12.75□□□□□ -0.37
VRK2-201ENST00000340157 ZNF706Q9Y5V0 76 aaPredicted RBP12.75□□□□□ -0.37
VRK2-201ENST00000340157 ANAPC11Q9NYG5 84 aa12.74□□□□□ -0.37
VRK2-201ENST00000340157 Q8NBF4 154 aa12.73□□□□□ -0.37
VRK2-201ENST00000340157 C21orf62-AS1Q17RA5 79 aa12.72□□□□□ -0.37
VRK2-201ENST00000340157 Q6ZVQ6 151 aa12.68□□□□□ -0.38
VRK2-201ENST00000340157 UBL5Q9BZL1 73 aa12.68□□□□□ -0.38
VRK2-201ENST00000340157 IGLV9-49A0A0B4J1Y8 123 aa12.67□□□□□ -0.38
VRK2-201ENST00000340157 SMR3BP02814 79 aaPredicted RBP12.65□□□□□ -0.38
VRK2-201ENST00000340157 Q6JHZ5 121 aa12.65□□□□□ -0.38
VRK2-201ENST00000340157 CRYGAP11844 174 aa12.65□□□□□ -0.38
VRK2-201ENST00000340157 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
VRK2-201ENST00000340157 IGKV3D-7A0A0C4DH55 119 aa12.63□□□□□ -0.39
VRK2-201ENST00000340157 FAT1Q14517 4588 aa12.63□□□□□ -0.39
VRK2-201ENST00000340157 C9orf153Q5TBE3 101 aa12.63□□□□□ -0.39
VRK2-201ENST00000340157 A0A1B0GW54 56 aa12.62□□□□□ -0.39
VRK2-201ENST00000340157 RPL37AP61513 92 aaKnown RBP12.62□□□□□ -0.39
VRK2-201ENST00000340157 MOBPQ13875 183 aa12.6□□□□□ -0.39
VRK2-201ENST00000340157 KRTAP10-4P60372 401 aaPredicted RBP12.58□□□□□ -0.4
VRK2-201ENST00000340157 Q6Q795 121 aa12.57□□□□□ -0.4
VRK2-201ENST00000340157 KRTAP1-4P0C5Y4 121 aa12.57□□□□□ -0.4
VRK2-201ENST00000340157 ATP5EP2Q5VTU8 51 aa12.56□□□□□ -0.4
VRK2-201ENST00000340157 NREPQ16612 68 aa12.55□□□□□ -0.4
VRK2-201ENST00000340157 A0A087WSZ3 146 aa12.55□□□□□ -0.4
VRK2-201ENST00000340157 A0A087X002 238 aa12.55□□□□□ -0.4
VRK2-201ENST00000340157 IMUPQ9GZP8 106 aa12.55□□□□□ -0.4
VRK2-201ENST00000340157 SCGB1A1P11684 91 aa12.52□□□□□ -0.41
VRK2-201ENST00000340157 KRTAP13-2Q52LG2 175 aa12.51□□□□□ -0.41
VRK2-201ENST00000340157 HSPG2P98160 4391 aa12.5□□□□□ -0.41
VRK2-201ENST00000340157 CXCL6P80162 114 aa12.5□□□□□ -0.41
VRK2-201ENST00000340157 SPINK6Q6UWN8 80 aa12.5□□□□□ -0.41
VRK2-201ENST00000340157 FAM229BQ4G0N7 80 aa12.48□□□□□ -0.41
VRK2-201ENST00000340157 A0A087WVE0 104 aa12.47□□□□□ -0.41
VRK2-201ENST00000340157 HRCT1Q6UXD1 115 aa12.47□□□□□ -0.41
VRK2-201ENST00000340157 EPPK1P58107 5090 aaKnown RBP12.45□□□□□ -0.42
VRK2-201ENST00000340157 RYR1P21817 5038 aa12.45□□□□□ -0.42
VRK2-201ENST00000340157 BPY2O14599 106 aa12.44□□□□□ -0.42
VRK2-201ENST00000340157 HIST1H4AP62805 103 aaKnown RBP12.44□□□□□ -0.42
VRK2-201ENST00000340157 CDK2AP2O75956 126 aa12.43□□□□□ -0.42
VRK2-201ENST00000340157 SSBP3-AS1Q7Z2R9 100 aa12.43□□□□□ -0.42
VRK2-201ENST00000340157 PLA2G1BP04054 148 aaKnown RBP12.41□□□□□ -0.42
VRK2-201ENST00000340157 Q8N9L7 120 aa12.41□□□□□ -0.42
VRK2-201ENST00000340157 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.42
VRK2-201ENST00000340157 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.42
VRK2-201ENST00000340157 DEFB116Q30KQ4 102 aa12.4□□□□□ -0.42
VRK2-201ENST00000340157 PKHD1L1Q86WI1 4243 aa12.39□□□□□ -0.43
VRK2-201ENST00000340157 DSCR10P59022 87 aa12.38□□□□□ -0.43
VRK2-201ENST00000340157 LINC00472Q9H8W2 130 aa12.38□□□□□ -0.43
VRK2-201ENST00000340157 PCP4P48539 62 aa12.38□□□□□ -0.43
VRK2-201ENST00000340157 IGKV4-1P06312 121 aa12.37□□□□□ -0.43
VRK2-201ENST00000340157 KRTAP17-1Q9BYP8 105 aa12.37□□□□□ -0.43
VRK2-201ENST00000340157 KIAA1109Q2LD37 5005 aa12.36□□□□□ -0.43
VRK2-201ENST00000340157 Q96NJ1 140 aa12.35□□□□□ -0.43
VRK2-201ENST00000340157 CD164Q04900 197 aa12.34□□□□□ -0.43
VRK2-201ENST00000340157 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
VRK2-201ENST00000340157 PRR26Q8N8Z3 221 aa12.31□□□□□ -0.44
VRK2-201ENST00000340157 K7EQZ3 153 aa12.31□□□□□ -0.44
VRK2-201ENST00000340157 Q5VSD8 79 aa12.3□□□□□ -0.44
VRK2-201ENST00000340157 SS18L2Q9UHA2 77 aa12.3□□□□□ -0.44
VRK2-201ENST00000340157 TYMSOSQ8TAI1 123 aa12.29□□□□□ -0.44
VRK2-201ENST00000340157 ANAPC13Q9BS18 74 aa12.23□□□□□ -0.45
VRK2-201ENST00000340157 A8MWP4 228 aa12.21□□□□□ -0.45
VRK2-201ENST00000340157 J3KT08 172 aa12.2□□□□□ -0.46
VRK2-201ENST00000340157 ASB16-AS1Q495Z4 193 aa12.19□□□□□ -0.46
VRK2-201ENST00000340157 Q5XG85 94 aa12.19□□□□□ -0.46
VRK2-201ENST00000340157 ATOX1O00244 68 aa12.19□□□□□ -0.46
VRK2-201ENST00000340157 PRR15Q8IV56 129 aa12.19□□□□□ -0.46
VRK2-201ENST00000340157 LRP1Q07954 4544 aaKnown RBP12.17□□□□□ -0.46
VRK2-201ENST00000340157 LINC00304Q8N9R0 145 aa12.14□□□□□ -0.47
VRK2-201ENST00000340157 Q8N1X5 172 aa12.14□□□□□ -0.47
VRK2-201ENST00000340157 SPINK1P00995 79 aa12.12□□□□□ -0.47
VRK2-201ENST00000340157 C4orf48Q5BLP8 95 aa12.12□□□□□ -0.47
VRK2-201ENST00000340157 HCG22E2RYF7 251 aa12.11□□□□□ -0.47
VRK2-201ENST00000340157 C1orf195Q5TG92 126 aa12.11□□□□□ -0.47
VRK2-201ENST00000340157 LIMD2Q9BT23 127 aa12.1□□□□□ -0.47
VRK2-201ENST00000340157 TNXBP22105 4242 aa12.09□□□□□ -0.47
VRK2-201ENST00000340157 A0A1B0GVX0 72 aa12.08□□□□□ -0.48
VRK2-201ENST00000340157 KRTAP29-1A8MX34 341 aaPredicted RBP12.08□□□□□ -0.48
VRK2-201ENST00000340157 NDUFB1O75438 58 aa12.08□□□□□ -0.48
VRK2-201ENST00000340157 FAT3Q8TDW7 4589 aa12.07□□□□□ -0.48
VRK2-201ENST00000340157 WFDC13Q8IUB5 93 aa12.07□□□□□ -0.48
VRK2-201ENST00000340157 MMP24-AS1A0A0U1RRL7 71 aa12.06□□□□□ -0.48
VRK2-201ENST00000340157 SPAG11AQ6PDA7 123 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms