RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CFAP46Q8IYW2 2715 aa7.2□□□□□ -1.26
SHANK2-201ENST00000338508 KRTAP1-1Q07627 177 aa7.19□□□□□ -1.26
SHANK2-201ENST00000338508 MMP24-AS1A0A0U1RRL7 71 aa7.18□□□□□ -1.26
SHANK2-201ENST00000338508 CFAP54Q96N23 3096 aa7.17□□□□□ -1.26
SHANK2-201ENST00000338508 ADM2Q7Z4H4 148 aa7.16□□□□□ -1.26
SHANK2-201ENST00000338508 PLAC8Q9NZF1 115 aa7.15□□□□□ -1.26
SHANK2-201ENST00000338508 ROMO1P60602 79 aa7.13□□□□□ -1.27
SHANK2-201ENST00000338508 SPATA8Q6RVD6 105 aa7.13□□□□□ -1.27
SHANK2-201ENST00000338508 ITPR3Q14573 2671 aa7.12□□□□□ -1.27
SHANK2-201ENST00000338508 FLNAP21333 2647 aaKnown RBP7.12□□□□□ -1.27
SHANK2-201ENST00000338508 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
SHANK2-201ENST00000338508 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
SHANK2-201ENST00000338508 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.28
SHANK2-201ENST00000338508 Q8NDZ9 215 aa7.08□□□□□ -1.28
SHANK2-201ENST00000338508 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
SHANK2-201ENST00000338508 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
SHANK2-201ENST00000338508 Q5VV11 94 aa7.07□□□□□ -1.28
SHANK2-201ENST00000338508 A0A0C4DFX4 3053 aa7.07□□□□□ -1.28
SHANK2-201ENST00000338508 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
SHANK2-201ENST00000338508 STAB1Q9NY15 2570 aa7.05□□□□□ -1.28
SHANK2-201ENST00000338508 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
SHANK2-201ENST00000338508 LAMA2P24043 3122 aaKnown RBP7.03□□□□□ -1.28
SHANK2-201ENST00000338508 NBEAL1Q6ZS30 2694 aa7.03□□□□□ -1.28
SHANK2-201ENST00000338508 CHD6Q8TD26 2715 aa7.03□□□□□ -1.28
SHANK2-201ENST00000338508 XIRP2A4UGR9 3374 aa7.03□□□□□ -1.28
SHANK2-201ENST00000338508 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
SHANK2-201ENST00000338508 LINC00472Q9H8W2 130 aa7.01□□□□□ -1.29
SHANK2-201ENST00000338508 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
SHANK2-201ENST00000338508 TEX15Q9BXT5 2789 aa7□□□□□ -1.29
SHANK2-201ENST00000338508 FREM2Q5SZK8 3169 aa7□□□□□ -1.29
SHANK2-201ENST00000338508 Q5XG85 94 aa6.99□□□□□ -1.29
SHANK2-201ENST00000338508 HELZ2Q9BYK8 2649 aaKnown RBP6.98□□□□□ -1.29
SHANK2-201ENST00000338508 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
SHANK2-201ENST00000338508 CENPEQ02224 2701 aa6.97□□□□□ -1.29
SHANK2-201ENST00000338508 LCE6AA0A183 80 aa6.96□□□□□ -1.29
SHANK2-201ENST00000338508 Q6ZR54 194 aa6.95□□□□□ -1.3
SHANK2-201ENST00000338508 SPRR1AP35321 89 aa6.94□□□□□ -1.3
SHANK2-201ENST00000338508 OXTP01178 125 aa6.93□□□□□ -1.3
SHANK2-201ENST00000338508 MKI67P46013 3256 aaKnown RBP6.92□□□□□ -1.3
SHANK2-201ENST00000338508 CELSR3Q9NYQ7 3312 aa6.92□□□□□ -1.3
SHANK2-201ENST00000338508 STAB2Q8WWQ8 2551 aa6.9□□□□□ -1.3
SHANK2-201ENST00000338508 A0A087X002 238 aa6.89□□□□□ -1.31
SHANK2-201ENST00000338508 REV3LO60673 3130 aa6.89□□□□□ -1.31
SHANK2-201ENST00000338508 PANO1I0J062 215 aa6.88□□□□□ -1.31
SHANK2-201ENST00000338508 A8MUU9 505 aa6.87□□□□□ -1.31
SHANK2-201ENST00000338508 A8MU10 97 aa6.86□□□□□ -1.31
SHANK2-201ENST00000338508 COL6A5A8TX70 2615 aa6.85□□□□□ -1.31
SHANK2-201ENST00000338508 SPRR1BP22528 89 aa6.85□□□□□ -1.31
SHANK2-201ENST00000338508 TRIOO75962 3097 aa6.84□□□□□ -1.31
SHANK2-201ENST00000338508 UNC79Q9P2D8 2635 aa6.84□□□□□ -1.31
SHANK2-201ENST00000338508 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.32
SHANK2-201ENST00000338508 TEP1Q99973 2627 aaKnown RBP6.83□□□□□ -1.32
SHANK2-201ENST00000338508 SETXQ7Z333 2677 aaKnown RBP6.81□□□□□ -1.32
SHANK2-201ENST00000338508 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
SHANK2-201ENST00000338508 MGAQ8IWI9 3026 aa6.78□□□□□ -1.32
SHANK2-201ENST00000338508 RANBP2P49792 3224 aaKnown RBP6.78□□□□□ -1.32
SHANK2-201ENST00000338508 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
SHANK2-201ENST00000338508 FRYQ5TBA9 3013 aa6.77□□□□□ -1.33
SHANK2-201ENST00000338508 CHD7Q9P2D1 2997 aa6.77□□□□□ -1.33
SHANK2-201ENST00000338508 NOTCH1P46531 2555 aa6.75□□□□□ -1.33
SHANK2-201ENST00000338508 DNAH14Q0VDD8 3507 aa6.75□□□□□ -1.33
SHANK2-201ENST00000338508 PRUNE2Q8WUY3 3088 aa6.72□□□□□ -1.33
SHANK2-201ENST00000338508 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
SHANK2-201ENST00000338508 GCN1Q92616 2671 aaKnown RBP6.72□□□□□ -1.33
SHANK2-201ENST00000338508 CRYBG3Q68DQ2 2970 aa6.71□□□□□ -1.34
SHANK2-201ENST00000338508 BRCA2P51587 3418 aa6.71□□□□□ -1.34
SHANK2-201ENST00000338508 CHD9Q3L8U1 2897 aa6.7□□□□□ -1.34
SHANK2-201ENST00000338508 WDFY4Q6ZS81 3184 aa6.7□□□□□ -1.34
SHANK2-201ENST00000338508 VPS13AQ96RL7 3174 aa6.7□□□□□ -1.34
SHANK2-201ENST00000338508 LAMA3Q16787 3333 aa6.69□□□□□ -1.34
SHANK2-201ENST00000338508 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
SHANK2-201ENST00000338508 UNC80Q8N2C7 3258 aa6.69□□□□□ -1.34
SHANK2-201ENST00000338508 NBEAL2Q6ZNJ1 2754 aa6.67□□□□□ -1.34
SHANK2-201ENST00000338508 TNP1P09430 55 aa6.67□□□□□ -1.34
SHANK2-201ENST00000338508 BAHCC1Q9P281 2608 aa6.66□□□□□ -1.34
SHANK2-201ENST00000338508 A0A1B0GVY2 172 aa6.66□□□□□ -1.34
SHANK2-201ENST00000338508 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
SHANK2-201ENST00000338508 HTTP42858 3142 aa6.65□□□□□ -1.34
SHANK2-201ENST00000338508 MAP1AP78559 2803 aaPredicted RBP6.63□□□□□ -1.35
SHANK2-201ENST00000338508 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
SHANK2-201ENST00000338508 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
SHANK2-201ENST00000338508 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
SHANK2-201ENST00000338508 CDH23Q9H251 3354 aa6.57□□□□□ -1.36
SHANK2-201ENST00000338508 CFAP47Q6ZTR5 3102 aa6.56□□□□□ -1.36
SHANK2-201ENST00000338508 TRANK1O15050 2925 aa6.56□□□□□ -1.36
SHANK2-201ENST00000338508 ITPR2Q14571 2701 aa6.55□□□□□ -1.36
SHANK2-201ENST00000338508 KALRNO60229 2985 aa6.54□□□□□ -1.36
SHANK2-201ENST00000338508 APCP25054 2843 aa6.53□□□□□ -1.36
SHANK2-201ENST00000338508 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
SHANK2-201ENST00000338508 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
SHANK2-201ENST00000338508 DMXL2Q8TDJ6 3036 aa6.53□□□□□ -1.36
SHANK2-201ENST00000338508 SZT2Q5T011 3432 aa6.53□□□□□ -1.36
SHANK2-201ENST00000338508 KMT2BQ9UMN6 2715 aaPredicted RBP6.52□□□□□ -1.37
SHANK2-201ENST00000338508 ZNF292O60281 2723 aa6.52□□□□□ -1.37
SHANK2-201ENST00000338508 COL6A3P12111 3177 aa6.51□□□□□ -1.37
SHANK2-201ENST00000338508 VCANP13611 3396 aa6.5□□□□□ -1.37
SHANK2-201ENST00000338508 SPEGQ15772 3267 aa6.5□□□□□ -1.37
SHANK2-201ENST00000338508 A6NN06 94 aa6.48□□□□□ -1.37
SHANK2-201ENST00000338508 NSD1Q96L73 2696 aaPredicted RBP6.47□□□□□ -1.37
SHANK2-201ENST00000338508 ASH1LQ9NR48 2969 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms