RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TNRC18O15417 2968 aaPredicted RBP3.98□□□□□ -1.77
PRKDC-202ENST00000338368 TRAV22A0A0B4J277 110 aa3.97□□□□□ -1.77
PRKDC-202ENST00000338368 A8MWP4 228 aa3.97□□□□□ -1.77
PRKDC-202ENST00000338368 APCP25054 2843 aa3.97□□□□□ -1.77
PRKDC-202ENST00000338368 LOC400499M0QZD8 3231 aa3.96□□□□□ -1.78
PRKDC-202ENST00000338368 ANAPC11Q9NYG5 84 aa3.96□□□□□ -1.78
PRKDC-202ENST00000338368 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
PRKDC-202ENST00000338368 Q1T7F1 81 aa3.96□□□□□ -1.78
PRKDC-202ENST00000338368 IGLV7-43P04211 117 aa3.96□□□□□ -1.78
PRKDC-202ENST00000338368 SPRR4Q96PI1 79 aa3.96□□□□□ -1.78
PRKDC-202ENST00000338368 FLNCQ14315 2725 aa3.95□□□□□ -1.78
PRKDC-202ENST00000338368 WDFY3Q8IZQ1 3526 aa3.95□□□□□ -1.78
PRKDC-202ENST00000338368 ZFHX4Q86UP3 3567 aa3.95□□□□□ -1.78
PRKDC-202ENST00000338368 TNP2Q05952 138 aa3.95□□□□□ -1.78
PRKDC-202ENST00000338368 LOC101927531A0A1B0GV80 90 aa3.95□□□□□ -1.78
PRKDC-202ENST00000338368 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
PRKDC-202ENST00000338368 DCHS1Q96JQ0 3298 aa3.94□□□□□ -1.78
PRKDC-202ENST00000338368 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
PRKDC-202ENST00000338368 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.94□□□□□ -1.78
PRKDC-202ENST00000338368 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
PRKDC-202ENST00000338368 C4orf26Q17RF5 130 aa3.93□□□□□ -1.78
PRKDC-202ENST00000338368 PSPHP1O15172 72 aa3.93□□□□□ -1.78
PRKDC-202ENST00000338368 C8orf17Q9NRJ1 99 aa3.93□□□□□ -1.78
PRKDC-202ENST00000338368 ATMQ13315 3056 aa3.93□□□□□ -1.78
PRKDC-202ENST00000338368 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
PRKDC-202ENST00000338368 H7BZZ5 65 aa3.92□□□□□ -1.78
PRKDC-202ENST00000338368 ADGRG4Q8IZF6 3080 aa3.92□□□□□ -1.78
PRKDC-202ENST00000338368 DSCR10P59022 87 aa3.92□□□□□ -1.78
PRKDC-202ENST00000338368 BOD1L1Q8NFC6 3051 aa3.92□□□□□ -1.78
PRKDC-202ENST00000338368 FRYQ5TBA9 3013 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 A0A1B0GVX0 72 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 SPRR1BP22528 89 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 RELNP78509 3460 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 PLAC8Q9NZF1 115 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
PRKDC-202ENST00000338368 SMR3BP02814 79 aaPredicted RBP3.9□□□□□ -1.79
PRKDC-202ENST00000338368 A8MUN3 132 aa3.9□□□□□ -1.79
PRKDC-202ENST00000338368 KRTAP4-16G5E9R7 235 aaPredicted RBP3.9□□□□□ -1.79
PRKDC-202ENST00000338368 ITPR1Q14643 2758 aa3.9□□□□□ -1.79
PRKDC-202ENST00000338368 TACC2O95359 2948 aa3.89□□□□□ -1.79
PRKDC-202ENST00000338368 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
PRKDC-202ENST00000338368 OXTP01178 125 aa3.88□□□□□ -1.79
PRKDC-202ENST00000338368 NBEAQ8NFP9 2946 aa3.88□□□□□ -1.79
PRKDC-202ENST00000338368 UBR5O95071 2799 aaPredicted RBP3.88□□□□□ -1.79
PRKDC-202ENST00000338368 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
PRKDC-202ENST00000338368 PANO1I0J062 215 aa3.87□□□□□ -1.79
PRKDC-202ENST00000338368 HRES1P13985 223 aa3.87□□□□□ -1.79
PRKDC-202ENST00000338368 Q96NJ1 140 aa3.87□□□□□ -1.79
PRKDC-202ENST00000338368 ASB16-AS1Q495Z4 193 aa3.87□□□□□ -1.79
PRKDC-202ENST00000338368 COL12A1Q99715 3063 aa3.87□□□□□ -1.79
PRKDC-202ENST00000338368 IGLV8-61A0A075B6I0 122 aa3.87□□□□□ -1.79
PRKDC-202ENST00000338368 CDC42SE1Q9NRR8 79 aa3.86□□□□□ -1.79
PRKDC-202ENST00000338368 A0A1B0GU69 56 aa3.86□□□□□ -1.79
PRKDC-202ENST00000338368 DMXL2Q8TDJ6 3036 aa3.86□□□□□ -1.79
PRKDC-202ENST00000338368 SEC61BP60468 96 aaKnown RBP3.86□□□□□ -1.79
PRKDC-202ENST00000338368 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
PRKDC-202ENST00000338368 LINC00472Q9H8W2 130 aa3.84□□□□□ -1.8
PRKDC-202ENST00000338368 Q6ZR54 194 aa3.84□□□□□ -1.8
PRKDC-202ENST00000338368 Q75L30 129 aa3.83□□□□□ -1.8
PRKDC-202ENST00000338368 UQCR11O14957 56 aa3.83□□□□□ -1.8
PRKDC-202ENST00000338368 LRBAP50851 2863 aa3.83□□□□□ -1.8
PRKDC-202ENST00000338368 COA5Q86WW8 74 aa3.83□□□□□ -1.8
PRKDC-202ENST00000338368 CYSTM1Q9H1C7 97 aa3.82□□□□□ -1.8
PRKDC-202ENST00000338368 Q6ZRN7 208 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-202ENST00000338368 MMP24-AS1A0A0U1RRL7 71 aa3.82□□□□□ -1.8
PRKDC-202ENST00000338368 ZZEF1O43149 2961 aa3.81□□□□□ -1.8
PRKDC-202ENST00000338368 DMXL1Q9Y485 3027 aa3.81□□□□□ -1.8
PRKDC-202ENST00000338368 KRTAP10-2P60368 255 aa3.81□□□□□ -1.8
PRKDC-202ENST00000338368 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
PRKDC-202ENST00000338368 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
PRKDC-202ENST00000338368 LCA10Q71F78 164 aa3.8□□□□□ -1.8
PRKDC-202ENST00000338368 CRYBG3Q68DQ2 2970 aa3.8□□□□□ -1.8
PRKDC-202ENST00000338368 Q6ZSA8 131 aa3.8□□□□□ -1.8
PRKDC-202ENST00000338368 KALRNO60229 2985 aa3.79□□□□□ -1.8
PRKDC-202ENST00000338368 DMDP11532 3685 aa3.79□□□□□ -1.8
PRKDC-202ENST00000338368 PRR26Q8N8Z3 221 aa3.79□□□□□ -1.8
PRKDC-202ENST00000338368 ASH1LQ9NR48 2969 aaKnown RBP3.78□□□□□ -1.8
PRKDC-202ENST00000338368 A0A087X002 238 aa3.78□□□□□ -1.8
PRKDC-202ENST00000338368 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
PRKDC-202ENST00000338368 TENM1Q9UKZ4 2725 aa3.78□□□□□ -1.8
PRKDC-202ENST00000338368 NIPBLQ6KC79 2804 aaeCLIP3.77□□□□□ -1.811e-6■■□□□ 14.3
PRKDC-202ENST00000338368 KRTAP10-1P60331 282 aa3.77□□□□□ -1.81
PRKDC-202ENST00000338368 LINC00483Q53H64 154 aa3.77□□□□□ -1.81
PRKDC-202ENST00000338368 NF1P21359 2839 aa3.77□□□□□ -1.81
PRKDC-202ENST00000338368 CFAP47Q6ZTR5 3102 aa3.77□□□□□ -1.81
PRKDC-202ENST00000338368 Q5XG85 94 aa3.77□□□□□ -1.81
PRKDC-202ENST00000338368 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
PRKDC-202ENST00000338368 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
PRKDC-202ENST00000338368 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
PRKDC-202ENST00000338368 HRNRQ86YZ3 2850 aaPredicted RBP3.75□□□□□ -1.81
PRKDC-202ENST00000338368 HIVEP1P15822 2718 aa3.74□□□□□ -1.81
PRKDC-202ENST00000338368 LCE6AA0A183 80 aa3.74□□□□□ -1.81
PRKDC-202ENST00000338368 NBEAL2Q6ZNJ1 2754 aa3.73□□□□□ -1.81
PRKDC-202ENST00000338368 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
PRKDC-202ENST00000338368 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
PRKDC-202ENST00000338368 RPS29P62273 56 aaKnown RBP3.73□□□□□ -1.81
PRKDC-202ENST00000338368 Q8N9P0 234 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-202ENST00000338368 M0R2T5 61 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms