RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 A0A087X002 238 aa10.38□□□□□ -0.75
CHGA-202ENST00000334654 OCIAD2Q56VL3 154 aa10.38□□□□□ -0.75
CHGA-202ENST00000334654 IGLV5-48A0A075B6I7 105 aa10.37□□□□□ -0.75
CHGA-202ENST00000334654 SPRR1BP22528 89 aa10.37□□□□□ -0.75
CHGA-202ENST00000334654 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
CHGA-202ENST00000334654 Q6ZQY7 126 aa10.37□□□□□ -0.75
CHGA-202ENST00000334654 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
CHGA-202ENST00000334654 OXTP01178 125 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 FAM229BQ4G0N7 80 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 BAALC-AS2P0C853 105 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 KRTAP13-2Q52LG2 175 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.36□□□□□ -0.75
CHGA-202ENST00000334654 TEN1Q86WV5 123 aa10.36□□□□□ -0.75
CHGA-202ENST00000334654 TMEM256-PLSCR3K7ERE1 68 aa10.35□□□□□ -0.75
CHGA-202ENST00000334654 Q8N377 158 aa10.35□□□□□ -0.75
CHGA-202ENST00000334654 ORMDL1Q9P0S3 153 aa10.35□□□□□ -0.75
CHGA-202ENST00000334654 DEFB105AQ8NG35 78 aa10.34□□□□□ -0.75
CHGA-202ENST00000334654 TEX49A0A1B0GTD5 131 aa10.33□□□□□ -0.76
CHGA-202ENST00000334654 ETDBQ3ZM63 59 aa10.33□□□□□ -0.76
CHGA-202ENST00000334654 CRYGAP11844 174 aa10.32□□□□□ -0.76
CHGA-202ENST00000334654 SMIM29Q86T20 159 aa10.32□□□□□ -0.76
CHGA-202ENST00000334654 TNXBP22105 4242 aa10.32□□□□□ -0.76
CHGA-202ENST00000334654 C3orf22Q8N5N4 141 aa10.31□□□□□ -0.76
CHGA-202ENST00000334654 J3QR89 54 aa10.3□□□□□ -0.76
CHGA-202ENST00000334654 MTURNQ8N3F0 131 aa10.3□□□□□ -0.76
CHGA-202ENST00000334654 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
CHGA-202ENST00000334654 K7ERU9 68 aa10.28□□□□□ -0.76
CHGA-202ENST00000334654 JMJD7-PLA2G4BH0Y9G9 81 aa10.25□□□□□ -0.77
CHGA-202ENST00000334654 DMBT1Q9UGM3 2413 aaPredicted RBP10.25□□□□□ -0.77
CHGA-202ENST00000334654 IGLV9-49A0A0B4J1Y8 123 aa10.24□□□□□ -0.77
CHGA-202ENST00000334654 TYMSOSQ8TAI1 123 aa10.24□□□□□ -0.77
CHGA-202ENST00000334654 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
CHGA-202ENST00000334654 OBSCN-AS1Q96MR7 158 aa10.23□□□□□ -0.77
CHGA-202ENST00000334654 MOBPQ13875 183 aa10.22□□□□□ -0.77
CHGA-202ENST00000334654 C21orf62-AS1Q17RA5 79 aa10.22□□□□□ -0.77
CHGA-202ENST00000334654 SSBP3-AS1Q7Z2R9 100 aa10.2□□□□□ -0.78
CHGA-202ENST00000334654 J3QL48 77 aa10.19□□□□□ -0.78
CHGA-202ENST00000334654 Q8NBF4 154 aa10.18□□□□□ -0.78
CHGA-202ENST00000334654 IGLV8-61A0A075B6I0 122 aa10.17□□□□□ -0.78
CHGA-202ENST00000334654 NDUFV3P56181 108 aaKnown RBP10.17□□□□□ -0.78
CHGA-202ENST00000334654 C9orf153Q5TBE3 101 aa10.17□□□□□ -0.78
CHGA-202ENST00000334654 PDE6GP18545 87 aa10.17□□□□□ -0.78
CHGA-202ENST00000334654 A0A0G2JQZ4 141 aa10.14□□□□□ -0.79
CHGA-202ENST00000334654 ACYP1P07311 99 aa10.14□□□□□ -0.79
CHGA-202ENST00000334654 RBM3P98179 157 aaKnown RBP10.14□□□□□ -0.79
CHGA-202ENST00000334654 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
CHGA-202ENST00000334654 F8WEM9 126 aa10.13□□□□□ -0.79
CHGA-202ENST00000334654 LINC00304Q8N9R0 145 aa10.13□□□□□ -0.79
CHGA-202ENST00000334654 LOC110117498A0A087WWA1 95 aa10.1□□□□□ -0.79
CHGA-202ENST00000334654 IGFL1Q6UW32 110 aa10.1□□□□□ -0.79
CHGA-202ENST00000334654 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
CHGA-202ENST00000334654 Q6JHZ5 121 aa10.08□□□□□ -0.8
CHGA-202ENST00000334654 SPAG11AQ6PDA7 123 aa10.07□□□□□ -0.8
CHGA-202ENST00000334654 HERC1Q15751 4861 aa10.06□□□□□ -0.8
CHGA-202ENST00000334654 CCKP06307 115 aa10.06□□□□□ -0.8
CHGA-202ENST00000334654 TRBV7-4A0A0J9YYF1 115 aa10.05□□□□□ -0.8
CHGA-202ENST00000334654 A0A1B0GV72 72 aa10.05□□□□□ -0.8
CHGA-202ENST00000334654 A0A1B0GW54 56 aa10.05□□□□□ -0.8
CHGA-202ENST00000334654 C14orf132Q9NPU4 83 aa10.05□□□□□ -0.8
CHGA-202ENST00000334654 SPINK1P00995 79 aa10.04□□□□□ -0.8
CHGA-202ENST00000334654 CD164Q04900 197 aa10.04□□□□□ -0.8
CHGA-202ENST00000334654 C4orf48Q5BLP8 95 aa10.04□□□□□ -0.8
CHGA-202ENST00000334654 HRCT1Q6UXD1 115 aa10.04□□□□□ -0.8
CHGA-202ENST00000334654 Q6ZQT0 140 aa10.02□□□□□ -0.81
CHGA-202ENST00000334654 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
CHGA-202ENST00000334654 A0A1W2PNM2 257 aa9.99□□□□□ -0.81
CHGA-202ENST00000334654 Q6Q795 121 aa9.98□□□□□ -0.81
CHGA-202ENST00000334654 VPS25Q9BRG1 176 aa9.97□□□□□ -0.81
CHGA-202ENST00000334654 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.82
CHGA-202ENST00000334654 Q5XG85 94 aa9.95□□□□□ -0.82
CHGA-202ENST00000334654 CDIP1Q9H305 208 aa9.93□□□□□ -0.82
CHGA-202ENST00000334654 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
CHGA-202ENST00000334654 LIMD2Q9BT23 127 aa9.91□□□□□ -0.82
CHGA-202ENST00000334654 LINC00643Q86TS7 51 aa9.9□□□□□ -0.83
CHGA-202ENST00000334654 UBL5Q9BZL1 73 aa9.89□□□□□ -0.83
CHGA-202ENST00000334654 SIGMAR1Q99720 223 aa9.88□□□□□ -0.83
CHGA-202ENST00000334654 A0A087WSZ3 146 aa9.87□□□□□ -0.83
CHGA-202ENST00000334654 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
CHGA-202ENST00000334654 ASB16-AS1Q495Z4 193 aa9.86□□□□□ -0.83
CHGA-202ENST00000334654 C1orf195Q5TG92 126 aa9.85□□□□□ -0.83
CHGA-202ENST00000334654 HMCN2Q8NDA2 5059 aa9.84□□□□□ -0.83
CHGA-202ENST00000334654 IMUPQ9GZP8 106 aa9.83□□□□□ -0.84
CHGA-202ENST00000334654 ATP5EP2Q5VTU8 51 aa9.82□□□□□ -0.84
CHGA-202ENST00000334654 PRR4Q16378 134 aa9.81□□□□□ -0.84
CHGA-202ENST00000334654 SS18L2Q9UHA2 77 aa9.81□□□□□ -0.84
CHGA-202ENST00000334654 Q96NJ1 140 aa9.8□□□□□ -0.84
CHGA-202ENST00000334654 FP248Q71RG6 208 aaPredicted RBP9.79□□□□□ -0.84
CHGA-202ENST00000334654 NREPQ16612 68 aa9.78□□□□□ -0.84
CHGA-202ENST00000334654 Q6ZVQ6 151 aa9.77□□□□□ -0.85
CHGA-202ENST00000334654 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
CHGA-202ENST00000334654 CXCL6P80162 114 aa9.75□□□□□ -0.85
CHGA-202ENST00000334654 LINC00472Q9H8W2 130 aa9.75□□□□□ -0.85
CHGA-202ENST00000334654 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
CHGA-202ENST00000334654 SCGB1A1P11684 91 aa9.71□□□□□ -0.86
CHGA-202ENST00000334654 LPAP08519 4548 aa9.7□□□□□ -0.86
CHGA-202ENST00000334654 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
CHGA-202ENST00000334654 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms