RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 DNAH12Q6ZR08 3092 aa10□□□□□ -0.81
PTCH1-201ENST00000331920 C5orf42Q9H799 3197 aa9.99□□□□□ -0.81
PTCH1-201ENST00000331920 Q8NDZ9 215 aa9.97□□□□□ -0.81
PTCH1-201ENST00000331920 AKAP13Q12802 2813 aa9.97□□□□□ -0.81
PTCH1-201ENST00000331920 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
PTCH1-201ENST00000331920 HECTD1Q9ULT8 2610 aa9.96□□□□□ -0.81
PTCH1-201ENST00000331920 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-201ENST00000331920 CEP295Q9C0D2 2601 aa9.95□□□□□ -0.82
PTCH1-201ENST00000331920 CFAP46Q8IYW2 2715 aa9.94□□□□□ -0.82
PTCH1-201ENST00000331920 PCNTO95613 3336 aa9.93□□□□□ -0.82
PTCH1-201ENST00000331920 A0A096LNT2 108 aa9.89□□□□□ -0.83
PTCH1-201ENST00000331920 PLAC8Q9NZF1 115 aa9.88□□□□□ -0.83
PTCH1-201ENST00000331920 ATRQ13535 2644 aa9.87□□□□□ -0.83
PTCH1-201ENST00000331920 LINC00472Q9H8W2 130 aa9.81□□□□□ -0.84
PTCH1-201ENST00000331920 NBEAL1Q6ZS30 2694 aa9.79□□□□□ -0.84
PTCH1-201ENST00000331920 STAB1Q9NY15 2570 aa9.79□□□□□ -0.84
PTCH1-201ENST00000331920 NDUFAF8A1L188 74 aa9.77□□□□□ -0.85
PTCH1-201ENST00000331920 CFAP54Q96N23 3096 aa9.76□□□□□ -0.85
PTCH1-201ENST00000331920 MAST4O15021 2626 aa9.76□□□□□ -0.85
PTCH1-201ENST00000331920 KRTAP26-1Q6PEX3 210 aa9.74□□□□□ -0.85
PTCH1-201ENST00000331920 Q6ZR54 194 aa9.73□□□□□ -0.85
PTCH1-201ENST00000331920 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
PTCH1-201ENST00000331920 ITPR3Q14573 2671 aa9.71□□□□□ -0.86
PTCH1-201ENST00000331920 PANO1I0J062 215 aa9.7□□□□□ -0.86
PTCH1-201ENST00000331920 A8MU10 97 aa9.7□□□□□ -0.86
PTCH1-201ENST00000331920 A8MUU9 505 aa9.68□□□□□ -0.86
PTCH1-201ENST00000331920 KRTAP25-1Q3LHN0 102 aa9.66□□□□□ -0.86
PTCH1-201ENST00000331920 A0A0C4DFX4 3053 aa9.66□□□□□ -0.86
PTCH1-201ENST00000331920 KRTAP10-1P60331 282 aa9.66□□□□□ -0.86
PTCH1-201ENST00000331920 FLNAP21333 2647 aaKnown RBP9.65□□□□□ -0.86
PTCH1-201ENST00000331920 KRTAP1-3Q8IUG1 177 aa9.65□□□□□ -0.87
PTCH1-201ENST00000331920 KRTAP10-2P60368 255 aa9.63□□□□□ -0.87
PTCH1-201ENST00000331920 OXTP01178 125 aa9.63□□□□□ -0.87
PTCH1-201ENST00000331920 SPRR1AP35321 89 aa9.63□□□□□ -0.87
PTCH1-201ENST00000331920 CENPEQ02224 2701 aa9.63□□□□□ -0.87
PTCH1-201ENST00000331920 CHD6Q8TD26 2715 aa9.62□□□□□ -0.87
PTCH1-201ENST00000331920 STAB2Q8WWQ8 2551 aa9.62□□□□□ -0.87
PTCH1-201ENST00000331920 LAMA2P24043 3122 aaKnown RBP9.59□□□□□ -0.87
PTCH1-201ENST00000331920 SPRR1BP22528 89 aa9.59□□□□□ -0.87
PTCH1-201ENST00000331920 FREM2Q5SZK8 3169 aa9.59□□□□□ -0.87
PTCH1-201ENST00000331920 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
PTCH1-201ENST00000331920 XIRP2A4UGR9 3374 aa9.57□□□□□ -0.88
PTCH1-201ENST00000331920 FLNBO75369 2602 aaKnown RBP9.54□□□□□ -0.88
PTCH1-201ENST00000331920 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
PTCH1-201ENST00000331920 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
PTCH1-201ENST00000331920 REV3LO60673 3130 aa9.52□□□□□ -0.88
PTCH1-201ENST00000331920 TEX15Q9BXT5 2789 aa9.51□□□□□ -0.89
PTCH1-201ENST00000331920 A0A087X002 238 aa9.49□□□□□ -0.89
PTCH1-201ENST00000331920 TNP1P09430 55 aa9.49□□□□□ -0.89
PTCH1-201ENST00000331920 CHD7Q9P2D1 2997 aa9.46□□□□□ -0.89
PTCH1-201ENST00000331920 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
PTCH1-201ENST00000331920 NOTCH2NLQ7Z3S9 236 aa9.43□□□□□ -0.9
PTCH1-201ENST00000331920 LCE6AA0A183 80 aa9.43□□□□□ -0.9
PTCH1-201ENST00000331920 CELSR3Q9NYQ7 3312 aa9.38□□□□□ -0.91
PTCH1-201ENST00000331920 UNC79Q9P2D8 2635 aa9.36□□□□□ -0.91
PTCH1-201ENST00000331920 A6NN06 94 aa9.35□□□□□ -0.91
PTCH1-201ENST00000331920 TRANK1O15050 2925 aa9.35□□□□□ -0.91
PTCH1-201ENST00000331920 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
PTCH1-201ENST00000331920 HELZ2Q9BYK8 2649 aaKnown RBP9.32□□□□□ -0.92
PTCH1-201ENST00000331920 KRTAP10-8P60410 259 aa9.31□□□□□ -0.92
PTCH1-201ENST00000331920 HTTP42858 3142 aa9.3□□□□□ -0.92
PTCH1-201ENST00000331920 CHD9Q3L8U1 2897 aa9.29□□□□□ -0.92
PTCH1-201ENST00000331920 RANBP2P49792 3224 aaKnown RBP9.28□□□□□ -0.92
PTCH1-201ENST00000331920 KRTAP29-1A8MX34 341 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-201ENST00000331920 TRIOO75962 3097 aa9.25□□□□□ -0.93
PTCH1-201ENST00000331920 GCN1Q92616 2671 aaKnown RBP9.25□□□□□ -0.93
PTCH1-201ENST00000331920 MKI67P46013 3256 aaKnown RBP9.24□□□□□ -0.93
PTCH1-201ENST00000331920 P0C880 135 aa9.23□□□□□ -0.93
PTCH1-201ENST00000331920 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
PTCH1-201ENST00000331920 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
PTCH1-201ENST00000331920 KRTAP4-16G5E9R7 235 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-201ENST00000331920 FRYQ5TBA9 3013 aa9.13□□□□□ -0.95
PTCH1-201ENST00000331920 VPS13AQ96RL7 3174 aa9.13□□□□□ -0.95
PTCH1-201ENST00000331920 UNC80Q8N2C7 3258 aa9.12□□□□□ -0.95
PTCH1-201ENST00000331920 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
PTCH1-201ENST00000331920 APCP25054 2843 aa9.12□□□□□ -0.95
PTCH1-201ENST00000331920 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-201ENST00000331920 TEP1Q99973 2627 aaKnown RBP9.09□□□□□ -0.95
PTCH1-201ENST00000331920 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
PTCH1-201ENST00000331920 CRYBG3Q68DQ2 2970 aa9.08□□□□□ -0.96
PTCH1-201ENST00000331920 DNAH14Q0VDD8 3507 aa9.04□□□□□ -0.96
PTCH1-201ENST00000331920 WDFY4Q6ZS81 3184 aa9.04□□□□□ -0.96
PTCH1-201ENST00000331920 MGAQ8IWI9 3026 aa9.04□□□□□ -0.96
PTCH1-201ENST00000331920 SETXQ7Z333 2677 aaKnown RBP9.02□□□□□ -0.97
PTCH1-201ENST00000331920 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
PTCH1-201ENST00000331920 DSPP15924 2871 aaKnown RBP9.01□□□□□ -0.97
PTCH1-201ENST00000331920 PP632Q6XCG6 107 aa8.98□□□□□ -0.97
PTCH1-201ENST00000331920 BRCA2P51587 3418 aa8.97□□□□□ -0.97
PTCH1-201ENST00000331920 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.97
PTCH1-201ENST00000331920 IGSF10Q6WRI0 2623 aa8.96□□□□□ -0.98
PTCH1-201ENST00000331920 MAP1AP78559 2803 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-201ENST00000331920 LAMA3Q16787 3333 aa8.96□□□□□ -0.98
PTCH1-201ENST00000331920 ITPR2Q14571 2701 aa8.95□□□□□ -0.98
PTCH1-201ENST00000331920 Q6ZRN7 208 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-201ENST00000331920 ZNF292O60281 2723 aa8.93□□□□□ -0.98
PTCH1-201ENST00000331920 KALRNO60229 2985 aa8.92□□□□□ -0.98
PTCH1-201ENST00000331920 PRUNE2Q8WUY3 3088 aa8.88□□□□□ -0.99
PTCH1-201ENST00000331920 KMT2BQ9UMN6 2715 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-201ENST00000331920 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
PTCH1-201ENST00000331920 UBR5O95071 2799 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms