RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 NBASA2RRP1 2371 aa-0.11□□□□□ -2.43
ZNF404-201ENST00000324394 COL12A1Q99715 3063 aa-0.11□□□□□ -2.43
ZNF404-201ENST00000324394 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.11□□□□□ -2.43
ZNF404-201ENST00000324394 UTP20O75691 2785 aaKnown RBP-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 SRRM2Q9UQ35 2752 aaKnown RBP-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 TIAM2Q8IVF5 1701 aa-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 LRP1BQ9NZR2 4599 aa-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 TLN1Q9Y490 2541 aaKnown RBP-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 SCN11AQ9UI33 1791 aa-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 ARFGEF2Q9Y6D5 1785 aa-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 ERVK-7P63135 1459 aa-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 PCNX1Q96RV3 2341 aa-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 NBPF19A0A087WUL8 3843 aa-0.12□□□□□ -2.43
ZNF404-201ENST00000324394 S100A13Q99584 98 aa-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 ITPR3Q14573 2671 aa-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 BPTFQ12830 3046 aa-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 URB2Q14146 1524 aaKnown RBP-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 NBEAL1Q6ZS30 2694 aa-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 LRRK2Q5S007 2527 aa-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 LAMA3Q16787 3333 aa-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 SVEP1Q4LDE5 3571 aa-0.13□□□□□ -2.43
ZNF404-201ENST00000324394 MXRA5Q9NR99 2828 aa-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 NWD1Q149M9 1564 aa-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 TGP01266 2768 aa-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 DEFA5Q01523 94 aa-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 GCN1Q92616 2671 aaKnown RBP-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 RGPD8O14715 1765 aaPredicted RBP-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 RGPD5Q99666 1765 aa-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 NESP48681 1621 aa-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 TACC2O95359 2948 aa-0.14□□□□□ -2.43
ZNF404-201ENST00000324394 DCAF1Q9Y4B6 1507 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 BVES-AS1Q5T3Y7 98 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 LAMA5O15230 3695 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 DNAH1Q9P2D7 4330 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 A0A087WXM4 84 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 NDUFB1O75438 58 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 KRTAP6-2Q3LI66 62 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 TEX15Q9BXT5 2789 aa-0.15□□□□□ -2.43
ZNF404-201ENST00000324394 ARHGAP35Q9NRY4 1499 aa-0.16□□□□□ -2.43
ZNF404-201ENST00000324394 NF1P21359 2839 aa-0.16□□□□□ -2.43
ZNF404-201ENST00000324394 UMAD1C9J7I0 102 aa-0.16□□□□□ -2.44
ZNF404-201ENST00000324394 SMIM13P0DJ93 91 aa-0.16□□□□□ -2.44
ZNF404-201ENST00000324394 LYSTQ99698 3801 aa-0.16□□□□□ -2.44
ZNF404-201ENST00000324394 MT1AP04731 61 aa-0.17□□□□□ -2.44
ZNF404-201ENST00000324394 SPRR2FQ96RM1 72 aa-0.17□□□□□ -2.44
ZNF404-201ENST00000324394 PLCH1Q4KWH8 1693 aa-0.17□□□□□ -2.44
ZNF404-201ENST00000324394 RICTORQ6R327 1708 aa-0.17□□□□□ -2.44
ZNF404-201ENST00000324394 FLGP20930 4061 aaPredicted RBP-0.17□□□□□ -2.44
ZNF404-201ENST00000324394 NREPQ16612 68 aa-0.17□□□□□ -2.44
ZNF404-201ENST00000324394 MAGI3Q5TCQ9 1506 aa-0.18□□□□□ -2.44
ZNF404-201ENST00000324394 CICQ96RK0 1608 aaPredicted RBP-0.18□□□□□ -2.44
ZNF404-201ENST00000324394 NIPBLQ6KC79 2804 aaeCLIP-0.18□□□□□ -2.44
ZNF404-201ENST00000324394 ADAMTS12P58397 1594 aa-0.18□□□□□ -2.44
ZNF404-201ENST00000324394 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
ZNF404-201ENST00000324394 IFI27P40305 119 aaPredicted RBP-0.18□□□□□ -2.44
ZNF404-201ENST00000324394 DNAH3Q8TD57 4116 aa-0.19□□□□□ -2.44
ZNF404-201ENST00000324394 WDFY4Q6ZS81 3184 aa-0.19□□□□□ -2.44
ZNF404-201ENST00000324394 MT1HP80294 61 aa-0.19□□□□□ -2.44
ZNF404-201ENST00000324394 DEFB121Q5J5C9 76 aa-0.19□□□□□ -2.44
ZNF404-201ENST00000324394 COX6B2Q6YFQ2 88 aa-0.19□□□□□ -2.44
ZNF404-201ENST00000324394 CEP295Q9C0D2 2601 aa-0.19□□□□□ -2.44
ZNF404-201ENST00000324394 CFAP43Q8NDM7 1665 aa-0.19□□□□□ -2.44
ZNF404-201ENST00000324394 FAM186AA6NE01 2351 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 NDUFA4O00483 81 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 LINC00158P58513 81 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 BOD1L1Q8NFC6 3051 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 ZZEF1O43149 2961 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 KALRNO60229 2985 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 DYNC1H1Q14204 4646 aaKnown RBP-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 CMYA5Q8N3K9 4069 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 LAMA2P24043 3122 aaKnown RBP-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 ATP5EP2Q5VTU8 51 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 PRO3102Q9H379 93 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 PTPN23Q9H3S7 1636 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 KDM5DQ9BY66 1539 aa-0.2□□□□□ -2.44
ZNF404-201ENST00000324394 CFAP46Q8IYW2 2715 aa-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 CELSR3Q9NYQ7 3312 aa-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 PKHD1P08F94 4074 aa-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 CEP290O15078 2479 aa-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 MT1XP80297 61 aa-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 LAMA1P25391 3075 aa-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 PLECQ15149 4684 aaKnown RBP-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 TLN2Q9Y4G6 2542 aa-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 DDX60LQ5H9U9 1706 aaKnown RBP-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.21□□□□□ -2.44
ZNF404-201ENST00000324394 H0YAA0 97 aa-0.22□□□□□ -2.44
ZNF404-201ENST00000324394 MT1HL1P0DM35 61 aa-0.22□□□□□ -2.44
ZNF404-201ENST00000324394 KRTAP19-5Q3LI72 72 aa-0.22□□□□□ -2.44
ZNF404-201ENST00000324394 MUC17Q685J3 4493 aa-0.22□□□□□ -2.44
ZNF404-201ENST00000324394 WDR87Q6ZQQ6 2873 aa-0.22□□□□□ -2.45
ZNF404-201ENST00000324394 PKHD1L1Q86WI1 4243 aa-0.22□□□□□ -2.45
ZNF404-201ENST00000324394 C9orf92A6NGG3 77 aa-0.22□□□□□ -2.45
ZNF404-201ENST00000324394 MT1EP04732 61 aa-0.22□□□□□ -2.45
ZNF404-201ENST00000324394 HMGA1P17096 107 aaKnown RBP-0.22□□□□□ -2.45
ZNF404-201ENST00000324394 MYO15AQ9UKN7 3530 aa-0.22□□□□□ -2.45
ZNF404-201ENST00000324394 MAP3K1Q13233 1512 aa-0.23□□□□□ -2.45
ZNF404-201ENST00000324394 DMXL1Q9Y485 3027 aa-0.23□□□□□ -2.45
ZNF404-201ENST00000324394 EP400Q96L91 3159 aa-0.23□□□□□ -2.45
ZNF404-201ENST00000324394 LCE6AA0A183 80 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms