RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 ANAPC11Q9NYG5 84 aa5.82□□□□□ -1.48
ZKSCAN1-201ENST00000324306 UTRNP46939 3433 aa5.81□□□□□ -1.48
ZKSCAN1-201ENST00000324306 GCN1Q92616 2671 aaKnown RBP5.81□□□□□ -1.48
ZKSCAN1-201ENST00000324306 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
ZKSCAN1-201ENST00000324306 CHD7Q9P2D1 2997 aa5.8□□□□□ -1.48
ZKSCAN1-201ENST00000324306 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
ZKSCAN1-201ENST00000324306 J3QL48 77 aa5.79□□□□□ -1.48
ZKSCAN1-201ENST00000324306 CASC10Q5T4H9 136 aa5.79□□□□□ -1.48
ZKSCAN1-201ENST00000324306 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
ZKSCAN1-201ENST00000324306 A6NN06 94 aa5.77□□□□□ -1.49
ZKSCAN1-201ENST00000324306 PLAC8Q9NZF1 115 aa5.77□□□□□ -1.49
ZKSCAN1-201ENST00000324306 H1FX-AS1Q4G0G2 97 aa5.77□□□□□ -1.49
ZKSCAN1-201ENST00000324306 C5orf42Q9H799 3197 aa5.77□□□□□ -1.49
ZKSCAN1-201ENST00000324306 MGAM2Q2M2H8 2515 aa5.77□□□□□ -1.49
ZKSCAN1-201ENST00000324306 CEP350Q5VT06 3117 aa5.75□□□□□ -1.49
ZKSCAN1-201ENST00000324306 Q6ZSA8 131 aa5.75□□□□□ -1.49
ZKSCAN1-201ENST00000324306 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
ZKSCAN1-201ENST00000324306 KRTAP10-3P60369 221 aa5.75□□□□□ -1.49
ZKSCAN1-201ENST00000324306 NBEAL1Q6ZS30 2694 aa5.75□□□□□ -1.49
ZKSCAN1-201ENST00000324306 LCE6AA0A183 80 aa5.74□□□□□ -1.49
ZKSCAN1-201ENST00000324306 Q8NDZ9 215 aa5.73□□□□□ -1.49
ZKSCAN1-201ENST00000324306 KRTAP26-1Q6PEX3 210 aa5.73□□□□□ -1.49
ZKSCAN1-201ENST00000324306 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.73□□□□□ -1.49
ZKSCAN1-201ENST00000324306 PCNTO95613 3336 aa5.73□□□□□ -1.49
ZKSCAN1-201ENST00000324306 MAP1AP78559 2803 aaPredicted RBP5.73□□□□□ -1.49
ZKSCAN1-201ENST00000324306 KRTAP29-1A8MX34 341 aaPredicted RBP5.71□□□□□ -1.5
ZKSCAN1-201ENST00000324306 CHD6Q8TD26 2715 aa5.7□□□□□ -1.5
ZKSCAN1-201ENST00000324306 AKAP13Q12802 2813 aa5.7□□□□□ -1.5
ZKSCAN1-201ENST00000324306 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
ZKSCAN1-201ENST00000324306 IGSF10Q6WRI0 2623 aa5.67□□□□□ -1.5
ZKSCAN1-201ENST00000324306 R4GN34 69 aa5.66□□□□□ -1.5
ZKSCAN1-201ENST00000324306 KRTAP4-16G5E9R7 235 aaPredicted RBP5.65□□□□□ -1.5
ZKSCAN1-201ENST00000324306 KRTAP1-3Q8IUG1 177 aa5.64□□□□□ -1.51
ZKSCAN1-201ENST00000324306 SETXQ7Z333 2677 aaKnown RBP5.63□□□□□ -1.51
ZKSCAN1-201ENST00000324306 TEX15Q9BXT5 2789 aa5.62□□□□□ -1.51
ZKSCAN1-201ENST00000324306 DSPP15924 2871 aaKnown RBP5.62□□□□□ -1.51
ZKSCAN1-201ENST00000324306 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
ZKSCAN1-201ENST00000324306 TEP1Q99973 2627 aaKnown RBP5.61□□□□□ -1.51
ZKSCAN1-201ENST00000324306 HTTP42858 3142 aa5.61□□□□□ -1.51
ZKSCAN1-201ENST00000324306 UNC79Q9P2D8 2635 aa5.61□□□□□ -1.51
ZKSCAN1-201ENST00000324306 A0A0C4DFX4 3053 aa5.61□□□□□ -1.51
ZKSCAN1-201ENST00000324306 KMT2BQ9UMN6 2715 aaPredicted RBP5.6□□□□□ -1.51
ZKSCAN1-201ENST00000324306 FLNCQ14315 2725 aa5.6□□□□□ -1.51
ZKSCAN1-201ENST00000324306 SMR3BP02814 79 aaPredicted RBP5.59□□□□□ -1.51
ZKSCAN1-201ENST00000324306 PANO1I0J062 215 aa5.59□□□□□ -1.51
ZKSCAN1-201ENST00000324306 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
ZKSCAN1-201ENST00000324306 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
ZKSCAN1-201ENST00000324306 RANBP2P49792 3224 aaKnown RBP5.57□□□□□ -1.52
ZKSCAN1-201ENST00000324306 ITPR2Q14571 2701 aa5.56□□□□□ -1.52
ZKSCAN1-201ENST00000324306 NOTCH1P46531 2555 aa5.56□□□□□ -1.52
ZKSCAN1-201ENST00000324306 MGAQ8IWI9 3026 aa5.55□□□□□ -1.52
ZKSCAN1-201ENST00000324306 M0QZ58 72 aa5.55□□□□□ -1.52
ZKSCAN1-201ENST00000324306 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
ZKSCAN1-201ENST00000324306 COL6A5A8TX70 2615 aa5.53□□□□□ -1.52
ZKSCAN1-201ENST00000324306 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
ZKSCAN1-201ENST00000324306 STAB1Q9NY15 2570 aa5.49□□□□□ -1.53
ZKSCAN1-201ENST00000324306 CFAP54Q96N23 3096 aa5.48□□□□□ -1.53
ZKSCAN1-201ENST00000324306 LAMA2P24043 3122 aaKnown RBP5.46□□□□□ -1.53
ZKSCAN1-201ENST00000324306 TRIOO75962 3097 aa5.46□□□□□ -1.53
ZKSCAN1-201ENST00000324306 UTP20O75691 2785 aaKnown RBP5.45□□□□□ -1.54
ZKSCAN1-201ENST00000324306 NBEAL2Q6ZNJ1 2754 aa5.45□□□□□ -1.54
ZKSCAN1-201ENST00000324306 M0R2T5 61 aa5.45□□□□□ -1.54
ZKSCAN1-201ENST00000324306 ITPR1Q14643 2758 aa5.45□□□□□ -1.54
ZKSCAN1-201ENST00000324306 NDUFAF8A1L188 74 aa5.44□□□□□ -1.54
ZKSCAN1-201ENST00000324306 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
ZKSCAN1-201ENST00000324306 KRTAP1-5Q9BYS1 174 aa5.44□□□□□ -1.54
ZKSCAN1-201ENST00000324306 STAB2Q8WWQ8 2551 aa5.41□□□□□ -1.54
ZKSCAN1-201ENST00000324306 BAHCC1Q9P281 2608 aa5.41□□□□□ -1.54
ZKSCAN1-201ENST00000324306 NSD1Q96L73 2696 aaPredicted RBP5.4□□□□□ -1.54
ZKSCAN1-201ENST00000324306 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.55
ZKSCAN1-201ENST00000324306 LAMA3Q16787 3333 aa5.39□□□□□ -1.55
ZKSCAN1-201ENST00000324306 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
ZKSCAN1-201ENST00000324306 BRCA2P51587 3418 aa5.39□□□□□ -1.55
ZKSCAN1-201ENST00000324306 UBR5O95071 2799 aaPredicted RBP5.39□□□□□ -1.55
ZKSCAN1-201ENST00000324306 MKI67P46013 3256 aaKnown RBP5.39□□□□□ -1.55
ZKSCAN1-201ENST00000324306 FRYLO94915 3013 aa5.38□□□□□ -1.55
ZKSCAN1-201ENST00000324306 A8MUU9 505 aa5.38□□□□□ -1.55
ZKSCAN1-201ENST00000324306 VPS13AQ96RL7 3174 aa5.37□□□□□ -1.55
ZKSCAN1-201ENST00000324306 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
ZKSCAN1-201ENST00000324306 LRBAP50851 2863 aa5.36□□□□□ -1.55
ZKSCAN1-201ENST00000324306 FRYQ5TBA9 3013 aa5.36□□□□□ -1.55
ZKSCAN1-201ENST00000324306 APCP25054 2843 aa5.35□□□□□ -1.55
ZKSCAN1-201ENST00000324306 KRTAP13-1Q8IUC0 172 aa5.34□□□□□ -1.55
ZKSCAN1-201ENST00000324306 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
ZKSCAN1-201ENST00000324306 A8MU10 97 aa5.32□□□□□ -1.56
ZKSCAN1-201ENST00000324306 Q5VSD8 79 aa5.32□□□□□ -1.56
ZKSCAN1-201ENST00000324306 PRUNE2Q8WUY3 3088 aa5.3□□□□□ -1.56
ZKSCAN1-201ENST00000324306 KRTAP10-1P60331 282 aa5.3□□□□□ -1.56
ZKSCAN1-201ENST00000324306 SPTBN5Q9NRC6 3674 aaKnown RBP5.29□□□□□ -1.56
ZKSCAN1-201ENST00000324306 NBEAQ8NFP9 2946 aa5.29□□□□□ -1.56
ZKSCAN1-201ENST00000324306 WDFY4Q6ZS81 3184 aa5.28□□□□□ -1.56
ZKSCAN1-201ENST00000324306 TACC2O95359 2948 aa5.28□□□□□ -1.56
ZKSCAN1-201ENST00000324306 NIPBLQ6KC79 2804 aaeCLIP5.26□□□□□ -1.572e-6■■■■■ 44.5
ZKSCAN1-201ENST00000324306 KRTAP10-2P60368 255 aa5.25□□□□□ -1.57
ZKSCAN1-201ENST00000324306 CDH23Q9H251 3354 aa5.25□□□□□ -1.57
ZKSCAN1-201ENST00000324306 TNP1P09430 55 aa5.24□□□□□ -1.57
ZKSCAN1-201ENST00000324306 HRNRQ86YZ3 2850 aaPredicted RBP5.24□□□□□ -1.57
ZKSCAN1-201ENST00000324306 Q6ZRN7 208 aaPredicted RBP5.24□□□□□ -1.57
ZKSCAN1-201ENST00000324306 KRTAP7-1Q8IUC3 87 aa5.22□□□□□ -1.57
ZKSCAN1-201ENST00000324306 KALRNO60229 2985 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms