RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 Q8NDZ9 215 aa10.73□□□□□ -0.69
PXN-203ENST00000323871 DMAC1Q96GE9 116 aa10.73□□□□□ -0.69
PXN-203ENST00000323871 Q5W150 140 aa10.72□□□□□ -0.69
PXN-203ENST00000323871 USP24Q9UPU5 2620 aa10.72□□□□□ -0.69
PXN-203ENST00000323871 LUZP6Q538Z0 58 aa10.7□□□□□ -0.7
PXN-203ENST00000323871 Q6ZR54 194 aa10.68□□□□□ -0.7
PXN-203ENST00000323871 GOLGB1Q14789 3259 aaKnown RBP10.65□□□□□ -0.7
PXN-203ENST00000323871 R4GN34 69 aa10.62□□□□□ -0.71
PXN-203ENST00000323871 ATRQ13535 2644 aa10.59□□□□□ -0.71
PXN-203ENST00000323871 MAST4O15021 2626 aa10.57□□□□□ -0.72
PXN-203ENST00000323871 KRTAP21-3Q3LHN1 58 aa10.55□□□□□ -0.72
PXN-203ENST00000323871 A0A0A0MQY5 61 aa10.53□□□□□ -0.72
PXN-203ENST00000323871 A6NN06 94 aa10.48□□□□□ -0.73
PXN-203ENST00000323871 ASB16-AS1Q495Z4 193 aa10.48□□□□□ -0.73
PXN-203ENST00000323871 RPS29P62273 56 aaKnown RBP10.47□□□□□ -0.73
PXN-203ENST00000323871 CFAP46Q8IYW2 2715 aa10.47□□□□□ -0.73
PXN-203ENST00000323871 KRTAP4-16G5E9R7 235 aaPredicted RBP10.46□□□□□ -0.74
PXN-203ENST00000323871 PANO1I0J062 215 aa10.44□□□□□ -0.74
PXN-203ENST00000323871 M0QZ58 72 aa10.4□□□□□ -0.75
PXN-203ENST00000323871 PLAC4Q8WY50 150 aa10.4□□□□□ -0.75
PXN-203ENST00000323871 KRTAP16-1A8MUX0 517 aa10.39□□□□□ -0.75
PXN-203ENST00000323871 BPTFQ12830 3046 aa10.37□□□□□ -0.75
PXN-203ENST00000323871 A0A087X002 238 aa10.36□□□□□ -0.75
PXN-203ENST00000323871 RPL37P61927 97 aaKnown RBP10.36□□□□□ -0.75
PXN-203ENST00000323871 Q6ZRN7 208 aaPredicted RBP10.35□□□□□ -0.75
PXN-203ENST00000323871 H1FX-AS1Q4G0G2 97 aa10.32□□□□□ -0.76
PXN-203ENST00000323871 PRRC2CQ9Y520 2896 aaKnown RBP10.3□□□□□ -0.76
PXN-203ENST00000323871 A8MU10 97 aa10.29□□□□□ -0.76
PXN-203ENST00000323871 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
PXN-203ENST00000323871 STAB1Q9NY15 2570 aa10.26□□□□□ -0.77
PXN-203ENST00000323871 ROMO1P60602 79 aa10.26□□□□□ -0.77
PXN-203ENST00000323871 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
PXN-203ENST00000323871 SPATA8Q6RVD6 105 aa10.22□□□□□ -0.77
PXN-203ENST00000323871 DNAH12Q6ZR08 3092 aa10.17□□□□□ -0.78
PXN-203ENST00000323871 KRTAP25-1Q3LHN0 102 aa10.17□□□□□ -0.78
PXN-203ENST00000323871 UTRNP46939 3433 aa10.16□□□□□ -0.78
PXN-203ENST00000323871 CHD7Q9P2D1 2997 aa10.13□□□□□ -0.79
PXN-203ENST00000323871 KRTAP11-1Q8IUC1 163 aa10.12□□□□□ -0.79
PXN-203ENST00000323871 ZNF292O60281 2723 aa10.11□□□□□ -0.79
PXN-203ENST00000323871 CHD9Q3L8U1 2897 aa10.1□□□□□ -0.79
PXN-203ENST00000323871 BAHCC1Q9P281 2608 aa10.09□□□□□ -0.79
PXN-203ENST00000323871 KRTAP13-1Q8IUC0 172 aa10.08□□□□□ -0.8
PXN-203ENST00000323871 KRTAP13-2Q52LG2 175 aa10.08□□□□□ -0.8
PXN-203ENST00000323871 NDUFAF8A1L188 74 aa10.07□□□□□ -0.8
PXN-203ENST00000323871 TEX15Q9BXT5 2789 aa10.07□□□□□ -0.8
PXN-203ENST00000323871 UNC79Q9P2D8 2635 aa10.07□□□□□ -0.8
PXN-203ENST00000323871 TEP1Q99973 2627 aaKnown RBP10.07□□□□□ -0.8
PXN-203ENST00000323871 COL6A5A8TX70 2615 aa10.05□□□□□ -0.8
PXN-203ENST00000323871 NOTCH2NLQ7Z3S9 236 aa10.05□□□□□ -0.8
PXN-203ENST00000323871 KRTAP7-1Q8IUC3 87 aa10.03□□□□□ -0.8
PXN-203ENST00000323871 A0A0C4DFX4 3053 aa10.02□□□□□ -0.81
PXN-203ENST00000323871 A8MUU9 505 aa10□□□□□ -0.81
PXN-203ENST00000323871 CENPEQ02224 2701 aa9.97□□□□□ -0.81
PXN-203ENST00000323871 C20orf166-AS1Q96NR2 134 aa9.97□□□□□ -0.81
PXN-203ENST00000323871 CEP350Q5VT06 3117 aa9.97□□□□□ -0.81
PXN-203ENST00000323871 NBEAL1Q6ZS30 2694 aa9.97□□□□□ -0.81
PXN-203ENST00000323871 SETXQ7Z333 2677 aaKnown RBP9.95□□□□□ -0.82
PXN-203ENST00000323871 IGSF10Q6WRI0 2623 aa9.94□□□□□ -0.82
PXN-203ENST00000323871 CHD6Q8TD26 2715 aa9.91□□□□□ -0.82
PXN-203ENST00000323871 TRANK1O15050 2925 aa9.87□□□□□ -0.83
PXN-203ENST00000323871 C5orf42Q9H799 3197 aa9.86□□□□□ -0.83
PXN-203ENST00000323871 PCNTO95613 3336 aa9.83□□□□□ -0.84
PXN-203ENST00000323871 AKAP13Q12802 2813 aa9.83□□□□□ -0.84
PXN-203ENST00000323871 KMT2BQ9UMN6 2715 aaPredicted RBP9.81□□□□□ -0.84
PXN-203ENST00000323871 GCN1Q92616 2671 aaKnown RBP9.79□□□□□ -0.84
PXN-203ENST00000323871 NOTCH1P46531 2555 aa9.78□□□□□ -0.84
PXN-203ENST00000323871 MGAQ8IWI9 3026 aa9.78□□□□□ -0.84
PXN-203ENST00000323871 FLG2Q5D862 2391 aaPredicted RBP9.76□□□□□ -0.85
PXN-203ENST00000323871 NSD1Q96L73 2696 aaPredicted RBP9.75□□□□□ -0.85
PXN-203ENST00000323871 ITPR2Q14571 2701 aa9.73□□□□□ -0.85
PXN-203ENST00000323871 DMBT1Q9UGM3 2413 aaPredicted RBP9.73□□□□□ -0.85
PXN-203ENST00000323871 HTTP42858 3142 aa9.72□□□□□ -0.85
PXN-203ENST00000323871 TNP1P09430 55 aa9.68□□□□□ -0.86
PXN-203ENST00000323871 XP32Q5T750 250 aa9.63□□□□□ -0.87
PXN-203ENST00000323871 CFAP54Q96N23 3096 aa9.62□□□□□ -0.87
PXN-203ENST00000323871 KRTAP1-4P0C5Y4 121 aa9.62□□□□□ -0.87
PXN-203ENST00000323871 MAP1AP78559 2803 aaPredicted RBP9.61□□□□□ -0.87
PXN-203ENST00000323871 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
PXN-203ENST00000323871 RANBP2P49792 3224 aaKnown RBP9.57□□□□□ -0.88
PXN-203ENST00000323871 UBR5O95071 2799 aaPredicted RBP9.57□□□□□ -0.88
PXN-203ENST00000323871 DSPP15924 2871 aaKnown RBP9.56□□□□□ -0.88
PXN-203ENST00000323871 STAB2Q8WWQ8 2551 aa9.52□□□□□ -0.89
PXN-203ENST00000323871 NBEAL2Q6ZNJ1 2754 aa9.51□□□□□ -0.89
PXN-203ENST00000323871 LAMA3Q16787 3333 aa9.45□□□□□ -0.9
PXN-203ENST00000323871 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
PXN-203ENST00000323871 PP632Q6XCG6 107 aa9.41□□□□□ -0.9
PXN-203ENST00000323871 ITPR1Q14643 2758 aa9.41□□□□□ -0.9
PXN-203ENST00000323871 LAMA2P24043 3122 aaKnown RBP9.4□□□□□ -0.9
PXN-203ENST00000323871 KRTAP10-8P60410 259 aa9.39□□□□□ -0.91
PXN-203ENST00000323871 HIVEP1P15822 2718 aa9.38□□□□□ -0.91
PXN-203ENST00000323871 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
PXN-203ENST00000323871 C10orf95Q9H7T3 257 aa9.37□□□□□ -0.91
PXN-203ENST00000323871 BRCA2P51587 3418 aa9.35□□□□□ -0.91
PXN-203ENST00000323871 KRTAP13-3Q3SY46 172 aa9.33□□□□□ -0.92
PXN-203ENST00000323871 PRO2289Q9P1D8 64 aa9.33□□□□□ -0.92
PXN-203ENST00000323871 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
PXN-203ENST00000323871 WDFY4Q6ZS81 3184 aa9.3□□□□□ -0.92
PXN-203ENST00000323871 FREM2Q5SZK8 3169 aa9.3□□□□□ -0.92
PXN-203ENST00000323871 H0YAA0 97 aa9.27□□□□□ -0.93
PXN-203ENST00000323871 FRYQ5TBA9 3013 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms