RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 TRBV7-4A0A0J9YYF1 115 aa18.91■□□□□ 0.62
NECTIN3-201ENST00000319792 RPL37AP61513 92 aaKnown RBP18.9■□□□□ 0.62
NECTIN3-201ENST00000319792 DSCR8Q96T75 97 aa18.9■□□□□ 0.62
NECTIN3-201ENST00000319792 PDE6GP18545 87 aa18.88■□□□□ 0.61
NECTIN3-201ENST00000319792 Q6ZQT0 140 aa18.88■□□□□ 0.61
NECTIN3-201ENST00000319792 F8WEM9 126 aa18.86■□□□□ 0.61
NECTIN3-201ENST00000319792 SMR3BP02814 79 aaPredicted RBP18.86■□□□□ 0.61
NECTIN3-201ENST00000319792 CCKP06307 115 aa18.85■□□□□ 0.61
NECTIN3-201ENST00000319792 IGLV8-61A0A075B6I0 122 aa18.84■□□□□ 0.61
NECTIN3-201ENST00000319792 FAM240AA0A1B0GVK7 77 aa18.84■□□□□ 0.61
NECTIN3-201ENST00000319792 VPS13BQ7Z7G8 4022 aa18.84■□□□□ 0.61
NECTIN3-201ENST00000319792 CDK2AP2O75956 126 aa18.84■□□□□ 0.61
NECTIN3-201ENST00000319792 C21orf62-AS1Q17RA5 79 aa18.8■□□□□ 0.6
NECTIN3-201ENST00000319792 ACYP1P07311 99 aa18.77■□□□□ 0.6
NECTIN3-201ENST00000319792 KRTAP10-4P60372 401 aaPredicted RBP18.77■□□□□ 0.6
NECTIN3-201ENST00000319792 SPINK6Q6UWN8 80 aa18.72■□□□□ 0.59
NECTIN3-201ENST00000319792 Q6JHZ5 121 aa18.7■□□□□ 0.58
NECTIN3-201ENST00000319792 ANAPC11Q9NYG5 84 aa18.7■□□□□ 0.58
NECTIN3-201ENST00000319792 IGFL1Q6UW32 110 aa18.69■□□□□ 0.58
NECTIN3-201ENST00000319792 CDIP1Q9H305 208 aa18.66■□□□□ 0.58
NECTIN3-201ENST00000319792 A0A1W2PNM2 257 aa18.65■□□□□ 0.58
NECTIN3-201ENST00000319792 VPS25Q9BRG1 176 aa18.65■□□□□ 0.58
NECTIN3-201ENST00000319792 IGLV9-49A0A0B4J1Y8 123 aa18.64■□□□□ 0.58
NECTIN3-201ENST00000319792 Q8NBF4 154 aa18.64■□□□□ 0.58
NECTIN3-201ENST00000319792 KRTAP1-4P0C5Y4 121 aa18.64■□□□□ 0.57
NECTIN3-201ENST00000319792 FAM229BQ4G0N7 80 aa18.64■□□□□ 0.57
NECTIN3-201ENST00000319792 C9orf153Q5TBE3 101 aa18.62■□□□□ 0.57
NECTIN3-201ENST00000319792 FAT1Q14517 4588 aa18.61■□□□□ 0.57
NECTIN3-201ENST00000319792 PLA2G1BP04054 148 aaKnown RBP18.6■□□□□ 0.57
NECTIN3-201ENST00000319792 LINC00846Q9NV44 126 aa18.6■□□□□ 0.57
NECTIN3-201ENST00000319792 A0A0G2JQZ4 141 aa18.59■□□□□ 0.57
NECTIN3-201ENST00000319792 FAM229AH3BQW9 127 aa18.59■□□□□ 0.57
NECTIN3-201ENST00000319792 A0A1B0GW54 56 aa18.59■□□□□ 0.57
NECTIN3-201ENST00000319792 MOBPQ13875 183 aa18.58■□□□□ 0.56
NECTIN3-201ENST00000319792 EPPK1P58107 5090 aaKnown RBP18.57■□□□□ 0.56
NECTIN3-201ENST00000319792 HSPG2P98160 4391 aa18.57■□□□□ 0.56
NECTIN3-201ENST00000319792 RYR1P21817 5038 aa18.57■□□□□ 0.56
NECTIN3-201ENST00000319792 CRYGAP11844 174 aa18.54■□□□□ 0.56
NECTIN3-201ENST00000319792 Q6Q795 121 aa18.54■□□□□ 0.56
NECTIN3-201ENST00000319792 A0A087X002 238 aa18.52■□□□□ 0.56
NECTIN3-201ENST00000319792 Q5VSD8 79 aa18.5■□□□□ 0.55
NECTIN3-201ENST00000319792 KRTAP13-2Q52LG2 175 aa18.49■□□□□ 0.55
NECTIN3-201ENST00000319792 SSBP3-AS1Q7Z2R9 100 aa18.48■□□□□ 0.55
NECTIN3-201ENST00000319792 UBL5Q9BZL1 73 aa18.45■□□□□ 0.54
NECTIN3-201ENST00000319792 LINC00643Q86TS7 51 aa18.44■□□□□ 0.54
NECTIN3-201ENST00000319792 PKHD1L1Q86WI1 4243 aa18.43■□□□□ 0.54
NECTIN3-201ENST00000319792 Q6ZVQ6 151 aa18.41■□□□□ 0.54
NECTIN3-201ENST00000319792 KIAA1109Q2LD37 5005 aa18.41■□□□□ 0.54
NECTIN3-201ENST00000319792 TRBV7-7A0A0K0K1E9 115 aa18.39■□□□□ 0.54
NECTIN3-201ENST00000319792 KRTAP17-1Q9BYP8 105 aa18.39■□□□□ 0.54
NECTIN3-201ENST00000319792 Q8N1X5 172 aa18.38■□□□□ 0.53
NECTIN3-201ENST00000319792 A0A087WSZ3 146 aa18.36■□□□□ 0.53
NECTIN3-201ENST00000319792 CD164Q04900 197 aa18.33■□□□□ 0.53
NECTIN3-201ENST00000319792 MT-ATP8P03928 68 aa18.33■□□□□ 0.52
NECTIN3-201ENST00000319792 NREPQ16612 68 aa18.33■□□□□ 0.52
NECTIN3-201ENST00000319792 SIGMAR1Q99720 223 aa18.31■□□□□ 0.52
NECTIN3-201ENST00000319792 ATP5EP2Q5VTU8 51 aa18.28■□□□□ 0.52
NECTIN3-201ENST00000319792 HRCT1Q6UXD1 115 aa18.28■□□□□ 0.52
NECTIN3-201ENST00000319792 PRR26Q8N8Z3 221 aa18.28■□□□□ 0.52
NECTIN3-201ENST00000319792 TYMSOSQ8TAI1 123 aa18.28■□□□□ 0.52
NECTIN3-201ENST00000319792 IGKV3D-7A0A0C4DH55 119 aa18.2■□□□□ 0.5
NECTIN3-201ENST00000319792 SS18L2Q9UHA2 77 aa18.2■□□□□ 0.5
NECTIN3-201ENST00000319792 CXCL6P80162 114 aa18.19■□□□□ 0.5
NECTIN3-201ENST00000319792 BPY2O14599 106 aa18.13■□□□□ 0.49
NECTIN3-201ENST00000319792 LINC00472Q9H8W2 130 aa18.13■□□□□ 0.49
NECTIN3-201ENST00000319792 IMUPQ9GZP8 106 aa18.13■□□□□ 0.49
NECTIN3-201ENST00000319792 Q5XG85 94 aa18.11■□□□□ 0.49
NECTIN3-201ENST00000319792 LINC00304Q8N9R0 145 aa18.09■□□□□ 0.49
NECTIN3-201ENST00000319792 C4orf48Q5BLP8 95 aa18.08■□□□□ 0.49
NECTIN3-201ENST00000319792 Q96NJ1 140 aa18.08■□□□□ 0.48
NECTIN3-201ENST00000319792 ASB16-AS1Q495Z4 193 aa18.07■□□□□ 0.48
NECTIN3-201ENST00000319792 SPINK1P00995 79 aa18.06■□□□□ 0.48
NECTIN3-201ENST00000319792 SPAG11AQ6PDA7 123 aa18.06■□□□□ 0.48
NECTIN3-201ENST00000319792 BIRC6Q9NR09 4857 aa18.04■□□□□ 0.48
NECTIN3-201ENST00000319792 DSCR10P59022 87 aa18.02■□□□□ 0.47
NECTIN3-201ENST00000319792 RPS29P62273 56 aaKnown RBP18.02■□□□□ 0.47
NECTIN3-201ENST00000319792 DEFB116Q30KQ4 102 aa18.02■□□□□ 0.47
NECTIN3-201ENST00000319792 LIMD2Q9BT23 127 aa18.02■□□□□ 0.47
NECTIN3-201ENST00000319792 J3KT08 172 aa18■□□□□ 0.47
NECTIN3-201ENST00000319792 KRTAP10-8P60410 259 aa18■□□□□ 0.47
NECTIN3-201ENST00000319792 HIST1H4AP62805 103 aaKnown RBP17.97■□□□□ 0.47
NECTIN3-201ENST00000319792 FLG2Q5D862 2391 aaPredicted RBP17.96■□□□□ 0.47
NECTIN3-201ENST00000319792 IGKV4-1P06312 121 aa17.94■□□□□ 0.46
NECTIN3-201ENST00000319792 Q8N9L7 120 aa17.93■□□□□ 0.46
NECTIN3-201ENST00000319792 KRTAP4-5Q9BYR2 181 aa17.93■□□□□ 0.46
NECTIN3-201ENST00000319792 A0A087WVE0 104 aa17.9■□□□□ 0.46
NECTIN3-201ENST00000319792 LRP1Q07954 4544 aaKnown RBP17.9■□□□□ 0.46
NECTIN3-201ENST00000319792 A8MWP4 228 aa17.89■□□□□ 0.45
NECTIN3-201ENST00000319792 K7EQZ3 153 aa17.88■□□□□ 0.45
NECTIN3-201ENST00000319792 FAT3Q8TDW7 4589 aa17.88■□□□□ 0.45
NECTIN3-201ENST00000319792 SCGB1A1P11684 91 aa17.88■□□□□ 0.45
NECTIN3-201ENST00000319792 C1orf195Q5TG92 126 aa17.87■□□□□ 0.45
NECTIN3-201ENST00000319792 TNXBP22105 4242 aa17.85■□□□□ 0.45
NECTIN3-201ENST00000319792 PRR15Q8IV56 129 aa17.82■□□□□ 0.44
NECTIN3-201ENST00000319792 OXTP01178 125 aa17.81■□□□□ 0.44
NECTIN3-201ENST00000319792 MT1HL1P0DM35 61 aa17.8■□□□□ 0.44
NECTIN3-201ENST00000319792 NDUFB1O75438 58 aa17.79■□□□□ 0.44
NECTIN3-201ENST00000319792 HERC2O95714 4834 aa17.79■□□□□ 0.44
NECTIN3-201ENST00000319792 FAM236AA0A1B0GUQ0 79 aa17.77■□□□□ 0.44
NECTIN3-201ENST00000319792 FAM236BA0A1B0GV22 79 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms