RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 CENPEQ02224 2701 aa7.48□□□□□ -1.21
FARP1-201ENST00000319562 ITPR3Q14573 2671 aa7.47□□□□□ -1.21
FARP1-201ENST00000319562 LINC00472Q9H8W2 130 aa7.47□□□□□ -1.21
FARP1-201ENST00000319562 CYSTM1Q9H1C7 97 aa7.46□□□□□ -1.22
FARP1-201ENST00000319562 SPRR1AP35321 89 aa7.45□□□□□ -1.22
FARP1-201ENST00000319562 FLNBO75369 2602 aaKnown RBP7.44□□□□□ -1.22
FARP1-201ENST00000319562 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
FARP1-201ENST00000319562 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
FARP1-201ENST00000319562 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
FARP1-201ENST00000319562 CHD6Q8TD26 2715 aa7.42□□□□□ -1.22
FARP1-201ENST00000319562 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
FARP1-201ENST00000319562 SPRR1BP22528 89 aa7.4□□□□□ -1.23
FARP1-201ENST00000319562 M0QZ58 72 aa7.37□□□□□ -1.23
FARP1-201ENST00000319562 CEP350Q5VT06 3117 aa7.37□□□□□ -1.23
FARP1-201ENST00000319562 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
FARP1-201ENST00000319562 Q6ZR54 194 aa7.33□□□□□ -1.24
FARP1-201ENST00000319562 DNAH12Q6ZR08 3092 aa7.31□□□□□ -1.24
FARP1-201ENST00000319562 KRTAP26-1Q6PEX3 210 aa7.31□□□□□ -1.24
FARP1-201ENST00000319562 HELZ2Q9BYK8 2649 aaKnown RBP7.3□□□□□ -1.24
FARP1-201ENST00000319562 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
FARP1-201ENST00000319562 OXTP01178 125 aa7.3□□□□□ -1.24
FARP1-201ENST00000319562 Q8NDZ9 215 aa7.3□□□□□ -1.24
FARP1-201ENST00000319562 NOTCH1P46531 2555 aa7.29□□□□□ -1.24
FARP1-201ENST00000319562 TEX15Q9BXT5 2789 aa7.29□□□□□ -1.24
FARP1-201ENST00000319562 ADM2Q7Z4H4 148 aa7.28□□□□□ -1.24
FARP1-201ENST00000319562 UNC79Q9P2D8 2635 aa7.27□□□□□ -1.25
FARP1-201ENST00000319562 KRTAP1-3Q8IUG1 177 aa7.26□□□□□ -1.25
FARP1-201ENST00000319562 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
FARP1-201ENST00000319562 GOLGB1Q14789 3259 aaKnown RBP7.25□□□□□ -1.25
FARP1-201ENST00000319562 GCN1Q92616 2671 aaKnown RBP7.23□□□□□ -1.25
FARP1-201ENST00000319562 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
FARP1-201ENST00000319562 C5orf42Q9H799 3197 aa7.22□□□□□ -1.25
FARP1-201ENST00000319562 COL6A5A8TX70 2615 aa7.22□□□□□ -1.25
FARP1-201ENST00000319562 PANO1I0J062 215 aa7.21□□□□□ -1.25
FARP1-201ENST00000319562 KRTAP1-1Q07627 177 aa7.21□□□□□ -1.25
FARP1-201ENST00000319562 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
FARP1-201ENST00000319562 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
FARP1-201ENST00000319562 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
FARP1-201ENST00000319562 PCNTO95613 3336 aa7.14□□□□□ -1.27
FARP1-201ENST00000319562 Q5VSD8 79 aa7.14□□□□□ -1.27
FARP1-201ENST00000319562 A6NN06 94 aa7.14□□□□□ -1.27
FARP1-201ENST00000319562 KMT2BQ9UMN6 2715 aaPredicted RBP7.1□□□□□ -1.27
FARP1-201ENST00000319562 NDUFAF8A1L188 74 aa7.09□□□□□ -1.27
FARP1-201ENST00000319562 TEP1Q99973 2627 aaKnown RBP7.08□□□□□ -1.28
FARP1-201ENST00000319562 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
FARP1-201ENST00000319562 A0A0C4DFX4 3053 aa7.06□□□□□ -1.28
FARP1-201ENST00000319562 KRTAP1-5Q9BYS1 174 aa7.05□□□□□ -1.28
FARP1-201ENST00000319562 A8MUU9 505 aa7.04□□□□□ -1.28
FARP1-201ENST00000319562 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
FARP1-201ENST00000319562 UTRNP46939 3433 aa7.01□□□□□ -1.29
FARP1-201ENST00000319562 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
FARP1-201ENST00000319562 A0A087X002 238 aa7□□□□□ -1.29
FARP1-201ENST00000319562 A8MU10 97 aa6.99□□□□□ -1.29
FARP1-201ENST00000319562 BAHCC1Q9P281 2608 aa6.98□□□□□ -1.29
FARP1-201ENST00000319562 APCP25054 2843 aa6.98□□□□□ -1.29
FARP1-201ENST00000319562 KRTAP10-2P60368 255 aa6.97□□□□□ -1.29
FARP1-201ENST00000319562 NBEAL2Q6ZNJ1 2754 aa6.97□□□□□ -1.29
FARP1-201ENST00000319562 LCE6AA0A183 80 aa6.96□□□□□ -1.3
FARP1-201ENST00000319562 ITPR2Q14571 2701 aa6.95□□□□□ -1.3
FARP1-201ENST00000319562 TNP1P09430 55 aa6.95□□□□□ -1.3
FARP1-201ENST00000319562 NOTCH2NLQ7Z3S9 236 aa6.95□□□□□ -1.3
FARP1-201ENST00000319562 LAMA2P24043 3122 aaKnown RBP6.92□□□□□ -1.3
FARP1-201ENST00000319562 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
FARP1-201ENST00000319562 ZNF292O60281 2723 aa6.92□□□□□ -1.3
FARP1-201ENST00000319562 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
FARP1-201ENST00000319562 MAP1AP78559 2803 aaPredicted RBP6.9□□□□□ -1.31
FARP1-201ENST00000319562 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
FARP1-201ENST00000319562 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
FARP1-201ENST00000319562 NSD1Q96L73 2696 aaPredicted RBP6.85□□□□□ -1.31
FARP1-201ENST00000319562 MGAQ8IWI9 3026 aa6.84□□□□□ -1.31
FARP1-201ENST00000319562 IGSF10Q6WRI0 2623 aa6.84□□□□□ -1.31
FARP1-201ENST00000319562 ITPR1Q14643 2758 aa6.81□□□□□ -1.32
FARP1-201ENST00000319562 UTP20O75691 2785 aaKnown RBP6.79□□□□□ -1.32
FARP1-201ENST00000319562 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
FARP1-201ENST00000319562 FRYQ5TBA9 3013 aa6.76□□□□□ -1.33
FARP1-201ENST00000319562 FREM2Q5SZK8 3169 aa6.74□□□□□ -1.33
FARP1-201ENST00000319562 CHD7Q9P2D1 2997 aa6.72□□□□□ -1.33
FARP1-201ENST00000319562 Q6ZRN7 208 aaPredicted RBP6.72□□□□□ -1.33
FARP1-201ENST00000319562 TRIOO75962 3097 aa6.7□□□□□ -1.34
FARP1-201ENST00000319562 TRANK1O15050 2925 aa6.7□□□□□ -1.34
FARP1-201ENST00000319562 DSPP15924 2871 aaKnown RBP6.68□□□□□ -1.34
FARP1-201ENST00000319562 KRTAP13-2Q52LG2 175 aa6.68□□□□□ -1.34
FARP1-201ENST00000319562 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
FARP1-201ENST00000319562 KALRNO60229 2985 aa6.67□□□□□ -1.34
FARP1-201ENST00000319562 VPS13AQ96RL7 3174 aa6.65□□□□□ -1.34
FARP1-201ENST00000319562 KRTAP7-1Q8IUC3 87 aa6.62□□□□□ -1.35
FARP1-201ENST00000319562 P0C880 135 aa6.62□□□□□ -1.35
FARP1-201ENST00000319562 ASH1LQ9NR48 2969 aaKnown RBP6.61□□□□□ -1.35
FARP1-201ENST00000319562 LRBAP50851 2863 aa6.6□□□□□ -1.35
FARP1-201ENST00000319562 KRTAP10-8P60410 259 aa6.6□□□□□ -1.35
FARP1-201ENST00000319562 WDFY4Q6ZS81 3184 aa6.59□□□□□ -1.35
FARP1-201ENST00000319562 FRYLO94915 3013 aa6.58□□□□□ -1.36
FARP1-201ENST00000319562 REV3LO60673 3130 aa6.58□□□□□ -1.36
FARP1-201ENST00000319562 MKI67P46013 3256 aaKnown RBP6.57□□□□□ -1.36
FARP1-201ENST00000319562 PRUNE2Q8WUY3 3088 aa6.54□□□□□ -1.36
FARP1-201ENST00000319562 H0YAA0 97 aa6.54□□□□□ -1.36
FARP1-201ENST00000319562 CELSR3Q9NYQ7 3312 aa6.53□□□□□ -1.36
FARP1-201ENST00000319562 XIRP2A4UGR9 3374 aa6.53□□□□□ -1.36
FARP1-201ENST00000319562 RANBP2P49792 3224 aaKnown RBP6.52□□□□□ -1.37
FARP1-201ENST00000319562 DMXL2Q8TDJ6 3036 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms