RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.03
EDEM3-201ENST00000318130 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
EDEM3-201ENST00000318130 COL6A3P12111 3177 aa8.59□□□□□ -1.03
EDEM3-201ENST00000318130 TRIOO75962 3097 aa8.59□□□□□ -1.03
EDEM3-201ENST00000318130 USP34Q70CQ2 3546 aa8.58□□□□□ -1.04
EDEM3-201ENST00000318130 OXTP01178 125 aa8.58□□□□□ -1.04
EDEM3-201ENST00000318130 LAMA2P24043 3122 aaKnown RBP8.57□□□□□ -1.04
EDEM3-201ENST00000318130 SPINK7P58062 85 aa8.55□□□□□ -1.04
EDEM3-201ENST00000318130 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
EDEM3-201ENST00000318130 USP24Q9UPU5 2620 aa8.55□□□□□ -1.04
EDEM3-201ENST00000318130 LCE6AA0A183 80 aa8.54□□□□□ -1.04
EDEM3-201ENST00000318130 CAMK2N1Q7Z7J9 78 aa8.54□□□□□ -1.04
EDEM3-201ENST00000318130 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
EDEM3-201ENST00000318130 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
EDEM3-201ENST00000318130 MGAM2Q2M2H8 2515 aa8.46□□□□□ -1.05
EDEM3-201ENST00000318130 SPRR1AP35321 89 aa8.46□□□□□ -1.05
EDEM3-201ENST00000318130 S4R3F8 94 aa8.45□□□□□ -1.06
EDEM3-201ENST00000318130 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
EDEM3-201ENST00000318130 Q5W150 140 aa8.44□□□□□ -1.06
EDEM3-201ENST00000318130 EPG5Q9HCE0 2579 aa8.42□□□□□ -1.06
EDEM3-201ENST00000318130 ZCCHC13Q8WW36 166 aaKnown RBP8.42□□□□□ -1.06
EDEM3-201ENST00000318130 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
EDEM3-201ENST00000318130 EYSQ5T1H1 3165 aa8.41□□□□□ -1.06
EDEM3-201ENST00000318130 WDFY4Q6ZS81 3184 aa8.4□□□□□ -1.06
EDEM3-201ENST00000318130 VCANP13611 3396 aa8.4□□□□□ -1.07
EDEM3-201ENST00000318130 MGAQ8IWI9 3026 aa8.38□□□□□ -1.07
EDEM3-201ENST00000318130 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
EDEM3-201ENST00000318130 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
EDEM3-201ENST00000318130 SPEGQ15772 3267 aa8.35□□□□□ -1.07
EDEM3-201ENST00000318130 SPRR1BP22528 89 aa8.35□□□□□ -1.07
EDEM3-201ENST00000318130 VPS13AQ96RL7 3174 aa8.35□□□□□ -1.07
EDEM3-201ENST00000318130 ITPR3Q14573 2671 aa8.34□□□□□ -1.07
EDEM3-201ENST00000318130 MYO15AQ9UKN7 3530 aa8.33□□□□□ -1.08
EDEM3-201ENST00000318130 A0A0C4DFX4 3053 aa8.33□□□□□ -1.08
EDEM3-201ENST00000318130 SEC61BP60468 96 aaKnown RBP8.31□□□□□ -1.08
EDEM3-201ENST00000318130 FLNBO75369 2602 aaKnown RBP8.31□□□□□ -1.08
EDEM3-201ENST00000318130 FLNAP21333 2647 aaKnown RBP8.31□□□□□ -1.08
EDEM3-201ENST00000318130 KRTAP26-1Q6PEX3 210 aa8.3□□□□□ -1.08
EDEM3-201ENST00000318130 A0A0A0MQY5 61 aa8.3□□□□□ -1.08
EDEM3-201ENST00000318130 CHD9Q3L8U1 2897 aa8.29□□□□□ -1.08
EDEM3-201ENST00000318130 PANO1I0J062 215 aa8.29□□□□□ -1.08
EDEM3-201ENST00000318130 FREM2Q5SZK8 3169 aa8.27□□□□□ -1.09
EDEM3-201ENST00000318130 CFAP46Q8IYW2 2715 aa8.26□□□□□ -1.09
EDEM3-201ENST00000318130 ATRQ13535 2644 aa8.26□□□□□ -1.09
EDEM3-201ENST00000318130 CFAP47Q6ZTR5 3102 aa8.25□□□□□ -1.09
EDEM3-201ENST00000318130 ROMO1P60602 79 aa8.25□□□□□ -1.09
EDEM3-201ENST00000318130 ASPMQ8IZT6 3477 aa8.24□□□□□ -1.09
EDEM3-201ENST00000318130 HELZ2Q9BYK8 2649 aaKnown RBP8.24□□□□□ -1.09
EDEM3-201ENST00000318130 RPL37P61927 97 aaKnown RBP8.23□□□□□ -1.09
EDEM3-201ENST00000318130 REV3LO60673 3130 aa8.23□□□□□ -1.09
EDEM3-201ENST00000318130 LAMA1P25391 3075 aa8.22□□□□□ -1.09
EDEM3-201ENST00000318130 R4GN34 69 aa8.21□□□□□ -1.09
EDEM3-201ENST00000318130 AKAP13Q12802 2813 aa8.21□□□□□ -1.1
EDEM3-201ENST00000318130 H1FX-AS1Q4G0G2 97 aa8.2□□□□□ -1.1
EDEM3-201ENST00000318130 Q6ZR54 194 aa8.19□□□□□ -1.1
EDEM3-201ENST00000318130 KRTAP29-1A8MX34 341 aaPredicted RBP8.19□□□□□ -1.1
EDEM3-201ENST00000318130 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
EDEM3-201ENST00000318130 CRYBG3Q68DQ2 2970 aa8.15□□□□□ -1.11
EDEM3-201ENST00000318130 MAST4O15021 2626 aa8.14□□□□□ -1.11
EDEM3-201ENST00000318130 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
EDEM3-201ENST00000318130 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
EDEM3-201ENST00000318130 KRTAP4-16G5E9R7 235 aaPredicted RBP8.14□□□□□ -1.11
EDEM3-201ENST00000318130 A0A087X002 238 aa8.13□□□□□ -1.11
EDEM3-201ENST00000318130 M0QZ58 72 aa8.13□□□□□ -1.11
EDEM3-201ENST00000318130 ADM2Q7Z4H4 148 aa8.11□□□□□ -1.11
EDEM3-201ENST00000318130 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
EDEM3-201ENST00000318130 A6NN06 94 aa8.1□□□□□ -1.11
EDEM3-201ENST00000318130 WDFY3Q8IZQ1 3526 aa8.08□□□□□ -1.12
EDEM3-201ENST00000318130 CHD6Q8TD26 2715 aa8.05□□□□□ -1.12
EDEM3-201ENST00000318130 BAHCC1Q9P281 2608 aa8.05□□□□□ -1.12
EDEM3-201ENST00000318130 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
EDEM3-201ENST00000318130 FRYQ5TBA9 3013 aa8.04□□□□□ -1.12
EDEM3-201ENST00000318130 TRANK1O15050 2925 aa8.03□□□□□ -1.12
EDEM3-201ENST00000318130 TEX15Q9BXT5 2789 aa8.01□□□□□ -1.13
EDEM3-201ENST00000318130 NBEAL1Q6ZS30 2694 aa8.01□□□□□ -1.13
EDEM3-201ENST00000318130 A8MU10 97 aa7.99□□□□□ -1.13
EDEM3-201ENST00000318130 TEP1Q99973 2627 aaKnown RBP7.99□□□□□ -1.13
EDEM3-201ENST00000318130 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
EDEM3-201ENST00000318130 CENPEQ02224 2701 aa7.98□□□□□ -1.13
EDEM3-201ENST00000318130 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
EDEM3-201ENST00000318130 KRTAP16-1A8MUX0 517 aa7.98□□□□□ -1.13
EDEM3-201ENST00000318130 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
EDEM3-201ENST00000318130 BOD1L1Q8NFC6 3051 aa7.96□□□□□ -1.13
EDEM3-201ENST00000318130 STAB1Q9NY15 2570 aa7.96□□□□□ -1.13
EDEM3-201ENST00000318130 UNC79Q9P2D8 2635 aa7.96□□□□□ -1.14
EDEM3-201ENST00000318130 GCN1Q92616 2671 aaKnown RBP7.95□□□□□ -1.14
EDEM3-201ENST00000318130 TNRC18O15417 2968 aaPredicted RBP7.95□□□□□ -1.14
EDEM3-201ENST00000318130 NBPF19A0A087WUL8 3843 aa7.93□□□□□ -1.14
EDEM3-201ENST00000318130 LRBAP50851 2863 aa7.92□□□□□ -1.14
EDEM3-201ENST00000318130 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
EDEM3-201ENST00000318130 DSPP15924 2871 aaKnown RBP7.92□□□□□ -1.14
EDEM3-201ENST00000318130 NOTCH1P46531 2555 aa7.87□□□□□ -1.15
EDEM3-201ENST00000318130 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
EDEM3-201ENST00000318130 FRYLO94915 3013 aa7.87□□□□□ -1.15
EDEM3-201ENST00000318130 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
EDEM3-201ENST00000318130 KRTAP7-1Q8IUC3 87 aa7.85□□□□□ -1.15
EDEM3-201ENST00000318130 ATMQ13315 3056 aa7.85□□□□□ -1.15
EDEM3-201ENST00000318130 NBEAL2Q6ZNJ1 2754 aa7.83□□□□□ -1.16
EDEM3-201ENST00000318130 DCHS1Q96JQ0 3298 aa7.82□□□□□ -1.16
EDEM3-201ENST00000318130 KALRNO60229 2985 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms