RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 COX7CP15954 63 aa4.41□□□□□ -1.7
NPHP1-201ENST00000316534 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.41□□□□□ -1.7
NPHP1-201ENST00000316534 GAGE2AQ6NT46 116 aa4.41□□□□□ -1.7
NPHP1-201ENST00000316534 LRP1BQ9NZR2 4599 aa4.41□□□□□ -1.7
NPHP1-201ENST00000316534 APOBP04114 4563 aaKnown RBP4.4□□□□□ -1.71
NPHP1-201ENST00000316534 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.71
NPHP1-201ENST00000316534 CXCL6P80162 114 aa4.4□□□□□ -1.71
NPHP1-201ENST00000316534 ST20-AS1Q8NBB2 130 aa4.4□□□□□ -1.71
NPHP1-201ENST00000316534 DSCR8Q96T75 97 aa4.39□□□□□ -1.71
NPHP1-201ENST00000316534 OXTP01178 125 aa4.39□□□□□ -1.71
NPHP1-201ENST00000316534 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
NPHP1-201ENST00000316534 A0A1W2PNM2 257 aa4.38□□□□□ -1.71
NPHP1-201ENST00000316534 IGKV2-24A0A0C4DH68 120 aa4.38□□□□□ -1.71
NPHP1-201ENST00000316534 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 FAM236AA0A1B0GUQ0 79 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 FAM236BA0A1B0GV22 79 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 Q6ZVQ6 151 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 Q8NBF4 154 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 SS18L2Q9UHA2 77 aa4.37□□□□□ -1.71
NPHP1-201ENST00000316534 ATOX1O00244 68 aa4.36□□□□□ -1.71
NPHP1-201ENST00000316534 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
NPHP1-201ENST00000316534 FAM19A1Q7Z5A9 133 aa4.36□□□□□ -1.71
NPHP1-201ENST00000316534 J3QL48 77 aa4.35□□□□□ -1.71
NPHP1-201ENST00000316534 LY6G6CO95867 125 aa4.35□□□□□ -1.71
NPHP1-201ENST00000316534 PRLHP81277 87 aa4.35□□□□□ -1.71
NPHP1-201ENST00000316534 KLKP1Q107X0 134 aa4.35□□□□□ -1.71
NPHP1-201ENST00000316534 IGFL1Q6UW32 110 aa4.34□□□□□ -1.71
NPHP1-201ENST00000316534 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
NPHP1-201ENST00000316534 PSORS1C2Q9UIG4 136 aa4.34□□□□□ -1.71
NPHP1-201ENST00000316534 Q5XG85 94 aa4.34□□□□□ -1.71
NPHP1-201ENST00000316534 UBE2BP63146 152 aa4.34□□□□□ -1.72
NPHP1-201ENST00000316534 C1orf137Q5JT78 98 aa4.34□□□□□ -1.72
NPHP1-201ENST00000316534 UBL5Q9BZL1 73 aa4.34□□□□□ -1.72
NPHP1-201ENST00000316534 ZNF861PO60384 105 aa4.33□□□□□ -1.72
NPHP1-201ENST00000316534 TMEM258P61165 79 aa4.33□□□□□ -1.72
NPHP1-201ENST00000316534 KRTAP10-1P60331 282 aa4.32□□□□□ -1.72
NPHP1-201ENST00000316534 LINC00336Q6ZUF6 198 aa4.32□□□□□ -1.72
NPHP1-201ENST00000316534 FAM30AQ9NZY2 134 aa4.32□□□□□ -1.72
NPHP1-201ENST00000316534 ZNF706Q9Y5V0 76 aaPredicted RBP4.31□□□□□ -1.72
NPHP1-201ENST00000316534 IGLV7-43P04211 117 aa4.31□□□□□ -1.72
NPHP1-201ENST00000316534 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
NPHP1-201ENST00000316534 DPH3Q96FX2 82 aa4.31□□□□□ -1.72
NPHP1-201ENST00000316534 IGKV4-1P06312 121 aa4.3□□□□□ -1.72
NPHP1-201ENST00000316534 H7BZZ5 65 aa4.3□□□□□ -1.72
NPHP1-201ENST00000316534 DEFB105AQ8NG35 78 aa4.3□□□□□ -1.72
NPHP1-201ENST00000316534 UBE2AP49459 152 aa4.29□□□□□ -1.72
NPHP1-201ENST00000316534 KMT2CQ8NEZ4 4911 aaKnown RBP4.29□□□□□ -1.72
NPHP1-201ENST00000316534 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.72
NPHP1-201ENST00000316534 ZCCHC13Q8WW36 166 aaKnown RBP4.29□□□□□ -1.72
NPHP1-201ENST00000316534 KRTAP10-4P60372 401 aaPredicted RBP4.29□□□□□ -1.72
NPHP1-201ENST00000316534 SCXQ7RTU7 201 aa4.29□□□□□ -1.72
NPHP1-201ENST00000316534 Q96NJ1 140 aa4.29□□□□□ -1.72
NPHP1-201ENST00000316534 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
NPHP1-201ENST00000316534 LINC00472Q9H8W2 130 aa4.28□□□□□ -1.72
NPHP1-201ENST00000316534 IGKV3D-7A0A0C4DH55 119 aa4.28□□□□□ -1.72
NPHP1-201ENST00000316534 DSCR10P59022 87 aa4.28□□□□□ -1.72
NPHP1-201ENST00000316534 CD164Q04900 197 aa4.28□□□□□ -1.72
NPHP1-201ENST00000316534 HIGD2AQ9BW72 106 aa4.28□□□□□ -1.72
NPHP1-201ENST00000316534 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
NPHP1-201ENST00000316534 FAM229BQ4G0N7 80 aa4.27□□□□□ -1.73
NPHP1-201ENST00000316534 A0A087WVE0 104 aa4.27□□□□□ -1.73
NPHP1-201ENST00000316534 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
NPHP1-201ENST00000316534 F8WEM9 126 aa4.26□□□□□ -1.73
NPHP1-201ENST00000316534 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
NPHP1-201ENST00000316534 RYR3Q15413 4870 aa4.26□□□□□ -1.73
NPHP1-201ENST00000316534 HSPG2P98160 4391 aa4.25□□□□□ -1.73
NPHP1-201ENST00000316534 NREPQ16612 68 aa4.25□□□□□ -1.73
NPHP1-201ENST00000316534 TGP01266 2768 aa4.25□□□□□ -1.73
NPHP1-201ENST00000316534 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
NPHP1-201ENST00000316534 SMIM20Q8N5G0 67 aa4.25□□□□□ -1.73
NPHP1-201ENST00000316534 A0A0U1RQV1 116 aa4.24□□□□□ -1.73
NPHP1-201ENST00000316534 TNXBP22105 4242 aa4.24□□□□□ -1.73
NPHP1-201ENST00000316534 J3KT08 172 aa4.24□□□□□ -1.73
NPHP1-201ENST00000316534 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
NPHP1-201ENST00000316534 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
NPHP1-201ENST00000316534 SSBP3-AS1Q7Z2R9 100 aa4.23□□□□□ -1.73
NPHP1-201ENST00000316534 BPY2O14599 106 aa4.22□□□□□ -1.73
NPHP1-201ENST00000316534 SRRM2Q9UQ35 2752 aaKnown RBP4.22□□□□□ -1.73
NPHP1-201ENST00000316534 MOBPQ13875 183 aa4.22□□□□□ -1.73
NPHP1-201ENST00000316534 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
NPHP1-201ENST00000316534 A0A0G2JQZ4 141 aa4.21□□□□□ -1.74
NPHP1-201ENST00000316534 HAMPP81172 84 aa4.21□□□□□ -1.74
NPHP1-201ENST00000316534 A8MWP4 228 aa4.2□□□□□ -1.74
NPHP1-201ENST00000316534 RPS29P62273 56 aaKnown RBP4.2□□□□□ -1.74
NPHP1-201ENST00000316534 A0A087WSZ3 146 aa4.19□□□□□ -1.74
NPHP1-201ENST00000316534 SPINK6Q6UWN8 80 aa4.19□□□□□ -1.74
NPHP1-201ENST00000316534 FP248Q71RG6 208 aaPredicted RBP4.19□□□□□ -1.74
NPHP1-201ENST00000316534 K7EQZ3 153 aa4.19□□□□□ -1.74
NPHP1-201ENST00000316534 FAT1Q14517 4588 aa4.19□□□□□ -1.74
NPHP1-201ENST00000316534 PRR15Q8IV56 129 aa4.19□□□□□ -1.74
NPHP1-201ENST00000316534 C4orf48Q5BLP8 95 aa4.18□□□□□ -1.74
NPHP1-201ENST00000316534 ATP5EP56381 51 aaPredicted RBP4.18□□□□□ -1.74
NPHP1-201ENST00000316534 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
NPHP1-201ENST00000316534 RYR1P21817 5038 aa4.17□□□□□ -1.74
NPHP1-201ENST00000316534 A0A087X002 238 aa4.17□□□□□ -1.74
NPHP1-201ENST00000316534 NDUFC1O43677 76 aa4.17□□□□□ -1.74
NPHP1-201ENST00000316534 MMP24-AS1A0A0U1RRL7 71 aa4.16□□□□□ -1.74
NPHP1-201ENST00000316534 Q8N9L7 120 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms