RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 STAB1Q9NY15 2570 aa7.97□□□□□ -1.13
SPTBN2-201ENST00000309996 FLNBO75369 2602 aaKnown RBP7.96□□□□□ -1.13
SPTBN2-201ENST00000309996 A0A096LNT2 108 aa7.95□□□□□ -1.14
SPTBN2-201ENST00000309996 MAST4O15021 2626 aa7.95□□□□□ -1.14
SPTBN2-201ENST00000309996 FREM2Q5SZK8 3169 aa7.94□□□□□ -1.14
SPTBN2-201ENST00000309996 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
SPTBN2-201ENST00000309996 CELSR3Q9NYQ7 3312 aa7.93□□□□□ -1.14
SPTBN2-201ENST00000309996 PRAC1Q96KF2 57 aa7.93□□□□□ -1.14
SPTBN2-201ENST00000309996 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
SPTBN2-201ENST00000309996 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
SPTBN2-201ENST00000309996 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
SPTBN2-201ENST00000309996 RANBP2P49792 3224 aaKnown RBP7.89□□□□□ -1.15
SPTBN2-201ENST00000309996 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
SPTBN2-201ENST00000309996 Q5XG85 94 aa7.89□□□□□ -1.15
SPTBN2-201ENST00000309996 ROMO1P60602 79 aa7.88□□□□□ -1.15
SPTBN2-201ENST00000309996 Q5W150 140 aa7.88□□□□□ -1.15
SPTBN2-201ENST00000309996 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
SPTBN2-201ENST00000309996 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
SPTBN2-201ENST00000309996 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
SPTBN2-201ENST00000309996 MKI67P46013 3256 aaKnown RBP7.84□□□□□ -1.15
SPTBN2-201ENST00000309996 Q5VV11 94 aa7.83□□□□□ -1.16
SPTBN2-201ENST00000309996 VPS13AQ96RL7 3174 aa7.8□□□□□ -1.16
SPTBN2-201ENST00000309996 NBEAL1Q6ZS30 2694 aa7.8□□□□□ -1.16
SPTBN2-201ENST00000309996 FLNAP21333 2647 aaKnown RBP7.8□□□□□ -1.16
SPTBN2-201ENST00000309996 FP248Q71RG6 208 aaPredicted RBP7.8□□□□□ -1.16
SPTBN2-201ENST00000309996 ITPR3Q14573 2671 aa7.8□□□□□ -1.16
SPTBN2-201ENST00000309996 LCE6AA0A183 80 aa7.79□□□□□ -1.16
SPTBN2-201ENST00000309996 KRTAP1-3Q8IUG1 177 aa7.79□□□□□ -1.16
SPTBN2-201ENST00000309996 DNAH14Q0VDD8 3507 aa7.79□□□□□ -1.16
SPTBN2-201ENST00000309996 KRTAP16-1A8MUX0 517 aa7.77□□□□□ -1.17
SPTBN2-201ENST00000309996 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
SPTBN2-201ENST00000309996 CHD7Q9P2D1 2997 aa7.76□□□□□ -1.17
SPTBN2-201ENST00000309996 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
SPTBN2-201ENST00000309996 HELZ2Q9BYK8 2649 aaKnown RBP7.75□□□□□ -1.17
SPTBN2-201ENST00000309996 CENPEQ02224 2701 aa7.74□□□□□ -1.17
SPTBN2-201ENST00000309996 TRIOO75962 3097 aa7.73□□□□□ -1.17
SPTBN2-201ENST00000309996 KRTAP1-1Q07627 177 aa7.73□□□□□ -1.17
SPTBN2-201ENST00000309996 CHD6Q8TD26 2715 aa7.72□□□□□ -1.17
SPTBN2-201ENST00000309996 SPRR1AP35321 89 aa7.72□□□□□ -1.17
SPTBN2-201ENST00000309996 TEX15Q9BXT5 2789 aa7.7□□□□□ -1.18
SPTBN2-201ENST00000309996 Q8NDZ9 215 aa7.69□□□□□ -1.18
SPTBN2-201ENST00000309996 BRCA2P51587 3418 aa7.68□□□□□ -1.18
SPTBN2-201ENST00000309996 KRTAP10-1P60331 282 aa7.68□□□□□ -1.18
SPTBN2-201ENST00000309996 CDH23Q9H251 3354 aa7.68□□□□□ -1.18
SPTBN2-201ENST00000309996 LAMA3Q16787 3333 aa7.67□□□□□ -1.18
SPTBN2-201ENST00000309996 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
SPTBN2-201ENST00000309996 UNC80Q8N2C7 3258 aa7.66□□□□□ -1.18
SPTBN2-201ENST00000309996 SPRR1BP22528 89 aa7.65□□□□□ -1.18
SPTBN2-201ENST00000309996 KRTAP10-2P60368 255 aa7.64□□□□□ -1.19
SPTBN2-201ENST00000309996 KRTAP26-1Q6PEX3 210 aa7.64□□□□□ -1.19
SPTBN2-201ENST00000309996 PRUNE2Q8WUY3 3088 aa7.63□□□□□ -1.19
SPTBN2-201ENST00000309996 STAB2Q8WWQ8 2551 aa7.63□□□□□ -1.19
SPTBN2-201ENST00000309996 A8MUU9 505 aa7.62□□□□□ -1.19
SPTBN2-201ENST00000309996 DSPP15924 2871 aaKnown RBP7.59□□□□□ -1.19
SPTBN2-201ENST00000309996 PANO1I0J062 215 aa7.58□□□□□ -1.2
SPTBN2-201ENST00000309996 BAHCC1Q9P281 2608 aa7.58□□□□□ -1.2
SPTBN2-201ENST00000309996 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
SPTBN2-201ENST00000309996 HTTP42858 3142 aa7.58□□□□□ -1.2
SPTBN2-201ENST00000309996 Q6ZR54 194 aa7.58□□□□□ -1.2
SPTBN2-201ENST00000309996 UNC79Q9P2D8 2635 aa7.57□□□□□ -1.2
SPTBN2-201ENST00000309996 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
SPTBN2-201ENST00000309996 TRANK1O15050 2925 aa7.55□□□□□ -1.2
SPTBN2-201ENST00000309996 KMT2BQ9UMN6 2715 aaPredicted RBP7.54□□□□□ -1.2
SPTBN2-201ENST00000309996 MGAQ8IWI9 3026 aa7.53□□□□□ -1.2
SPTBN2-201ENST00000309996 NOTCH1P46531 2555 aa7.51□□□□□ -1.21
SPTBN2-201ENST00000309996 KRTAP1-5Q9BYS1 174 aa7.51□□□□□ -1.21
SPTBN2-201ENST00000309996 MAP1AP78559 2803 aaPredicted RBP7.51□□□□□ -1.21
SPTBN2-201ENST00000309996 TNP1P09430 55 aa7.5□□□□□ -1.21
SPTBN2-201ENST00000309996 CHD9Q3L8U1 2897 aa7.49□□□□□ -1.21
SPTBN2-201ENST00000309996 FRYQ5TBA9 3013 aa7.48□□□□□ -1.21
SPTBN2-201ENST00000309996 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
SPTBN2-201ENST00000309996 WDFY4Q6ZS81 3184 aa7.46□□□□□ -1.21
SPTBN2-201ENST00000309996 P0C880 135 aa7.46□□□□□ -1.22
SPTBN2-201ENST00000309996 SETXQ7Z333 2677 aaKnown RBP7.45□□□□□ -1.22
SPTBN2-201ENST00000309996 TEP1Q99973 2627 aaKnown RBP7.45□□□□□ -1.22
SPTBN2-201ENST00000309996 ASH1LQ9NR48 2969 aaKnown RBP7.44□□□□□ -1.22
SPTBN2-201ENST00000309996 ZNF292O60281 2723 aa7.43□□□□□ -1.22
SPTBN2-201ENST00000309996 KALRNO60229 2985 aa7.42□□□□□ -1.22
SPTBN2-201ENST00000309996 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
SPTBN2-201ENST00000309996 A0A087X002 238 aa7.41□□□□□ -1.22
SPTBN2-201ENST00000309996 GCN1Q92616 2671 aaKnown RBP7.4□□□□□ -1.23
SPTBN2-201ENST00000309996 APCP25054 2843 aa7.39□□□□□ -1.23
SPTBN2-201ENST00000309996 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
SPTBN2-201ENST00000309996 SPEGQ15772 3267 aa7.39□□□□□ -1.23
SPTBN2-201ENST00000309996 SZT2Q5T011 3432 aa7.38□□□□□ -1.23
SPTBN2-201ENST00000309996 ITPR2Q14571 2701 aa7.37□□□□□ -1.23
SPTBN2-201ENST00000309996 LAMA1P25391 3075 aa7.36□□□□□ -1.23
SPTBN2-201ENST00000309996 A8MU10 97 aa7.36□□□□□ -1.23
SPTBN2-201ENST00000309996 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
SPTBN2-201ENST00000309996 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
SPTBN2-201ENST00000309996 COL6A3P12111 3177 aa7.34□□□□□ -1.23
SPTBN2-201ENST00000309996 KRTAP4-16G5E9R7 235 aaPredicted RBP7.33□□□□□ -1.24
SPTBN2-201ENST00000309996 NSD1Q96L73 2696 aaPredicted RBP7.33□□□□□ -1.24
SPTBN2-201ENST00000309996 BOD1L1Q8NFC6 3051 aa7.31□□□□□ -1.24
SPTBN2-201ENST00000309996 CRYBG3Q68DQ2 2970 aa7.31□□□□□ -1.24
SPTBN2-201ENST00000309996 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
SPTBN2-201ENST00000309996 FRYLO94915 3013 aa7.29□□□□□ -1.24
SPTBN2-201ENST00000309996 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
SPTBN2-201ENST00000309996 CFAP47Q6ZTR5 3102 aa7.29□□□□□ -1.24
SPTBN2-201ENST00000309996 COL12A1Q99715 3063 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms