RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 KRTAP26-1Q6PEX3 210 aa12.4□□□□□ -0.42
SH3RF3-201ENST00000309415 FP248Q71RG6 208 aaPredicted RBP12.4□□□□□ -0.42
SH3RF3-201ENST00000309415 Q75L30 129 aa12.39□□□□□ -0.43
SH3RF3-201ENST00000309415 PRRC2CQ9Y520 2896 aaKnown RBP12.39□□□□□ -0.43
SH3RF3-201ENST00000309415 LINC01558Q9Y6Z2 57 aa12.36□□□□□ -0.43
SH3RF3-201ENST00000309415 CFAP46Q8IYW2 2715 aa12.36□□□□□ -0.43
SH3RF3-201ENST00000309415 Q6ZR54 194 aa12.29□□□□□ -0.44
SH3RF3-201ENST00000309415 M0QZ58 72 aa12.28□□□□□ -0.44
SH3RF3-201ENST00000309415 STAB1Q9NY15 2570 aa12.24□□□□□ -0.45
SH3RF3-201ENST00000309415 PLAC4Q8WY50 150 aa12.23□□□□□ -0.45
SH3RF3-201ENST00000309415 PANO1I0J062 215 aa12.22□□□□□ -0.45
SH3RF3-201ENST00000309415 DNAH12Q6ZR08 3092 aa12.21□□□□□ -0.46
SH3RF3-201ENST00000309415 RPL37P61927 97 aaKnown RBP12.15□□□□□ -0.46
SH3RF3-201ENST00000309415 A0A087X002 238 aa12.13□□□□□ -0.47
SH3RF3-201ENST00000309415 ADM2Q7Z4H4 148 aa12.13□□□□□ -0.47
SH3RF3-201ENST00000309415 H1FX-AS1Q4G0G2 97 aa12.09□□□□□ -0.47
SH3RF3-201ENST00000309415 KRTAP4-16G5E9R7 235 aaPredicted RBP12.05□□□□□ -0.48
SH3RF3-201ENST00000309415 Q5VV11 94 aa12.03□□□□□ -0.48
SH3RF3-201ENST00000309415 ROMO1P60602 79 aa12.03□□□□□ -0.48
SH3RF3-201ENST00000309415 PRAC1Q96KF2 57 aa12.01□□□□□ -0.49
SH3RF3-201ENST00000309415 CEP350Q5VT06 3117 aa12□□□□□ -0.49
SH3RF3-201ENST00000309415 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
SH3RF3-201ENST00000309415 TEP1Q99973 2627 aaKnown RBP11.98□□□□□ -0.49
SH3RF3-201ENST00000309415 SETXQ7Z333 2677 aaKnown RBP11.96□□□□□ -0.49
SH3RF3-201ENST00000309415 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.5
SH3RF3-201ENST00000309415 CYSTM1Q9H1C7 97 aa11.95□□□□□ -0.5
SH3RF3-201ENST00000309415 CENPEQ02224 2701 aa11.94□□□□□ -0.5
SH3RF3-201ENST00000309415 C5orf42Q9H799 3197 aa11.93□□□□□ -0.5
SH3RF3-201ENST00000309415 CHD7Q9P2D1 2997 aa11.92□□□□□ -0.5
SH3RF3-201ENST00000309415 Q6ZRN7 208 aaPredicted RBP11.92□□□□□ -0.5
SH3RF3-201ENST00000309415 A0A0A0MQY5 61 aa11.91□□□□□ -0.5
SH3RF3-201ENST00000309415 Q5XG85 94 aa11.9□□□□□ -0.5
SH3RF3-201ENST00000309415 SPATA8Q6RVD6 105 aa11.9□□□□□ -0.5
SH3RF3-201ENST00000309415 NBEAL1Q6ZS30 2694 aa11.9□□□□□ -0.5
SH3RF3-201ENST00000309415 COL6A5A8TX70 2615 aa11.87□□□□□ -0.51
SH3RF3-201ENST00000309415 UTRNP46939 3433 aa11.87□□□□□ -0.51
SH3RF3-201ENST00000309415 FLG2Q5D862 2391 aaPredicted RBP11.87□□□□□ -0.51
SH3RF3-201ENST00000309415 KRTAP29-1A8MX34 341 aaPredicted RBP11.86□□□□□ -0.51
SH3RF3-201ENST00000309415 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
SH3RF3-201ENST00000309415 KRTAP21-3Q3LHN1 58 aa11.85□□□□□ -0.51
SH3RF3-201ENST00000309415 CHD6Q8TD26 2715 aa11.85□□□□□ -0.51
SH3RF3-201ENST00000309415 BAHCC1Q9P281 2608 aa11.84□□□□□ -0.51
SH3RF3-201ENST00000309415 KRTAP11-1Q8IUC1 163 aa11.83□□□□□ -0.52
SH3RF3-201ENST00000309415 NOTCH2NLQ7Z3S9 236 aa11.82□□□□□ -0.52
SH3RF3-201ENST00000309415 AKAP13Q12802 2813 aa11.82□□□□□ -0.52
SH3RF3-201ENST00000309415 A8MUU9 505 aa11.75□□□□□ -0.53
SH3RF3-201ENST00000309415 UNC79Q9P2D8 2635 aa11.74□□□□□ -0.53
SH3RF3-201ENST00000309415 C20orf166-AS1Q96NR2 134 aa11.73□□□□□ -0.53
SH3RF3-201ENST00000309415 CHD9Q3L8U1 2897 aa11.73□□□□□ -0.53
SH3RF3-201ENST00000309415 KRTAP13-2Q52LG2 175 aa11.72□□□□□ -0.53
SH3RF3-201ENST00000309415 ZNF292O60281 2723 aa11.68□□□□□ -0.54
SH3RF3-201ENST00000309415 MGAQ8IWI9 3026 aa11.66□□□□□ -0.54
SH3RF3-201ENST00000309415 KRTAP7-1Q8IUC3 87 aa11.64□□□□□ -0.55
SH3RF3-201ENST00000309415 DMBT1Q9UGM3 2413 aaPredicted RBP11.63□□□□□ -0.55
SH3RF3-201ENST00000309415 GCN1Q92616 2671 aaKnown RBP11.62□□□□□ -0.55
SH3RF3-201ENST00000309415 NOTCH1P46531 2555 aa11.61□□□□□ -0.55
SH3RF3-201ENST00000309415 KRTAP13-1Q8IUC0 172 aa11.59□□□□□ -0.55
SH3RF3-201ENST00000309415 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
SH3RF3-201ENST00000309415 A8MU10 97 aa11.49□□□□□ -0.57
SH3RF3-201ENST00000309415 HTTP42858 3142 aa11.42□□□□□ -0.58
SH3RF3-201ENST00000309415 ITPR2Q14571 2701 aa11.41□□□□□ -0.58
SH3RF3-201ENST00000309415 STAB2Q8WWQ8 2551 aa11.41□□□□□ -0.58
SH3RF3-201ENST00000309415 H3BS24 57 aa11.4□□□□□ -0.58
SH3RF3-201ENST00000309415 RANBP2P49792 3224 aaKnown RBP11.4□□□□□ -0.58
SH3RF3-201ENST00000309415 TRANK1O15050 2925 aa11.4□□□□□ -0.58
SH3RF3-201ENST00000309415 CFAP54Q96N23 3096 aa11.39□□□□□ -0.59
SH3RF3-201ENST00000309415 NSD1Q96L73 2696 aaPredicted RBP11.38□□□□□ -0.59
SH3RF3-201ENST00000309415 NBEAL2Q6ZNJ1 2754 aa11.37□□□□□ -0.59
SH3RF3-201ENST00000309415 TNP1P09430 55 aa11.36□□□□□ -0.59
SH3RF3-201ENST00000309415 DSPP15924 2871 aaKnown RBP11.35□□□□□ -0.59
SH3RF3-201ENST00000309415 UBR5O95071 2799 aaPredicted RBP11.35□□□□□ -0.59
SH3RF3-201ENST00000309415 A0A0C4DFX4 3053 aa11.33□□□□□ -0.59
SH3RF3-201ENST00000309415 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
SH3RF3-201ENST00000309415 KRTAP25-1Q3LHN0 102 aa11.26□□□□□ -0.61
SH3RF3-201ENST00000309415 WDFY4Q6ZS81 3184 aa11.24□□□□□ -0.61
SH3RF3-201ENST00000309415 PCNTO95613 3336 aa11.24□□□□□ -0.61
SH3RF3-201ENST00000309415 LAMA3Q16787 3333 aa11.22□□□□□ -0.61
SH3RF3-201ENST00000309415 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.61
SH3RF3-201ENST00000309415 FRYQ5TBA9 3013 aa11.21□□□□□ -0.62
SH3RF3-201ENST00000309415 XP32Q5T750 250 aa11.2□□□□□ -0.62
SH3RF3-201ENST00000309415 A0A1B0GVY2 172 aa11.18□□□□□ -0.62
SH3RF3-201ENST00000309415 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
SH3RF3-201ENST00000309415 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
SH3RF3-201ENST00000309415 KRTAP10-8P60410 259 aa11.14□□□□□ -0.63
SH3RF3-201ENST00000309415 KRTAP1-4P0C5Y4 121 aa11.11□□□□□ -0.63
SH3RF3-201ENST00000309415 ITPR1Q14643 2758 aa11.11□□□□□ -0.63
SH3RF3-201ENST00000309415 A6NN06 94 aa11.08□□□□□ -0.64
SH3RF3-201ENST00000309415 TPRXLQ17RH7 258 aa11.06□□□□□ -0.64
SH3RF3-201ENST00000309415 C10orf95Q9H7T3 257 aa11.05□□□□□ -0.64
SH3RF3-201ENST00000309415 TRIOO75962 3097 aa11□□□□□ -0.65
SH3RF3-201ENST00000309415 KRTAP10-10P60014 251 aa10.99□□□□□ -0.65
SH3RF3-201ENST00000309415 KRTAP16-1A8MUX0 517 aa10.98□□□□□ -0.65
SH3RF3-201ENST00000309415 HIVEP1P15822 2718 aa10.96□□□□□ -0.66
SH3RF3-201ENST00000309415 BRCA2P51587 3418 aa10.94□□□□□ -0.66
SH3RF3-201ENST00000309415 TENM4Q6N022 2769 aa10.92□□□□□ -0.66
SH3RF3-201ENST00000309415 PP632Q6XCG6 107 aa10.9□□□□□ -0.67
SH3RF3-201ENST00000309415 UTP20O75691 2785 aaKnown RBP10.89□□□□□ -0.67
SH3RF3-201ENST00000309415 LAMA2P24043 3122 aaKnown RBP10.88□□□□□ -0.67
SH3RF3-201ENST00000309415 PRO2289Q9P1D8 64 aa10.87□□□□□ -0.67
SH3RF3-201ENST00000309415 NDUFAF8A1L188 74 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms