RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 HTTP42858 3142 aa12.47□□□□□ -0.41
MTCL1-201ENST00000306329 SPINK7P58062 85 aa12.46□□□□□ -0.41
MTCL1-201ENST00000306329 SPRR1BP22528 89 aa12.41□□□□□ -0.42
MTCL1-201ENST00000306329 R4GN34 69 aa12.4□□□□□ -0.43
MTCL1-201ENST00000306329 MAST4O15021 2626 aa12.38□□□□□ -0.43
MTCL1-201ENST00000306329 FLNAP21333 2647 aaKnown RBP12.37□□□□□ -0.43
MTCL1-201ENST00000306329 H3BS24 57 aa12.35□□□□□ -0.43
MTCL1-201ENST00000306329 A0A0A0MQY5 61 aa12.32□□□□□ -0.44
MTCL1-201ENST00000306329 CHD9Q3L8U1 2897 aa12.32□□□□□ -0.44
MTCL1-201ENST00000306329 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
MTCL1-201ENST00000306329 MKI67P46013 3256 aaKnown RBP12.31□□□□□ -0.44
MTCL1-201ENST00000306329 KRTAP1-5Q9BYS1 174 aa12.29□□□□□ -0.44
MTCL1-201ENST00000306329 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
MTCL1-201ENST00000306329 ITPR3Q14573 2671 aa12.27□□□□□ -0.44
MTCL1-201ENST00000306329 RPL37P61927 97 aaKnown RBP12.25□□□□□ -0.45
MTCL1-201ENST00000306329 ROMO1P60602 79 aa12.22□□□□□ -0.45
MTCL1-201ENST00000306329 SEC61BP60468 96 aaKnown RBP12.22□□□□□ -0.45
MTCL1-201ENST00000306329 BRCA2P51587 3418 aa12.21□□□□□ -0.45
MTCL1-201ENST00000306329 RANBP2P49792 3224 aaKnown RBP12.19□□□□□ -0.46
MTCL1-201ENST00000306329 OXTP01178 125 aa12.19□□□□□ -0.46
MTCL1-201ENST00000306329 H1FX-AS1Q4G0G2 97 aa12.18□□□□□ -0.46
MTCL1-201ENST00000306329 Q5VSD8 79 aa12.18□□□□□ -0.46
MTCL1-201ENST00000306329 M0QZ58 72 aa12.17□□□□□ -0.46
MTCL1-201ENST00000306329 LAMA3Q16787 3333 aa12.15□□□□□ -0.46
MTCL1-201ENST00000306329 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
MTCL1-201ENST00000306329 FLG2Q5D862 2391 aaPredicted RBP12.14□□□□□ -0.47
MTCL1-201ENST00000306329 KRTAP10-2P60368 255 aa12.11□□□□□ -0.47
MTCL1-201ENST00000306329 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
MTCL1-201ENST00000306329 HELZ2Q9BYK8 2649 aaKnown RBP12.08□□□□□ -0.48
MTCL1-201ENST00000306329 LAMA2P24043 3122 aaKnown RBP12.06□□□□□ -0.48
MTCL1-201ENST00000306329 SPATA8Q6RVD6 105 aa12.06□□□□□ -0.48
MTCL1-201ENST00000306329 Q6ZR54 194 aa12.06□□□□□ -0.48
MTCL1-201ENST00000306329 CFAP54Q96N23 3096 aa12.05□□□□□ -0.48
MTCL1-201ENST00000306329 TRANK1O15050 2925 aa12.04□□□□□ -0.48
MTCL1-201ENST00000306329 ADM2Q7Z4H4 148 aa12.03□□□□□ -0.48
MTCL1-201ENST00000306329 PANO1I0J062 215 aa12□□□□□ -0.49
MTCL1-201ENST00000306329 UNC80Q8N2C7 3258 aa11.99□□□□□ -0.49
MTCL1-201ENST00000306329 KRTAP4-16G5E9R7 235 aaPredicted RBP11.98□□□□□ -0.49
MTCL1-201ENST00000306329 KRTAP29-1A8MX34 341 aaPredicted RBP11.98□□□□□ -0.49
MTCL1-201ENST00000306329 AKAP13Q12802 2813 aa11.98□□□□□ -0.49
MTCL1-201ENST00000306329 LCE6AA0A183 80 aa11.96□□□□□ -0.49
MTCL1-201ENST00000306329 CFAP46Q8IYW2 2715 aa11.96□□□□□ -0.49
MTCL1-201ENST00000306329 NBEAL1Q6ZS30 2694 aa11.95□□□□□ -0.5
MTCL1-201ENST00000306329 PLAC4Q8WY50 150 aa11.92□□□□□ -0.5
MTCL1-201ENST00000306329 A0A087X002 238 aa11.9□□□□□ -0.5
MTCL1-201ENST00000306329 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
MTCL1-201ENST00000306329 NOTCH2NLQ7Z3S9 236 aa11.87□□□□□ -0.51
MTCL1-201ENST00000306329 CDH23Q9H251 3354 aa11.86□□□□□ -0.51
MTCL1-201ENST00000306329 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
MTCL1-201ENST00000306329 PRUNE2Q8WUY3 3088 aa11.84□□□□□ -0.51
MTCL1-201ENST00000306329 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
MTCL1-201ENST00000306329 CENPEQ02224 2701 aa11.82□□□□□ -0.52
MTCL1-201ENST00000306329 XIRP2A4UGR9 3374 aa11.78□□□□□ -0.52
MTCL1-201ENST00000306329 TEX15Q9BXT5 2789 aa11.78□□□□□ -0.52
MTCL1-201ENST00000306329 TRIOO75962 3097 aa11.78□□□□□ -0.52
MTCL1-201ENST00000306329 MGAQ8IWI9 3026 aa11.77□□□□□ -0.53
MTCL1-201ENST00000306329 TEP1Q99973 2627 aaKnown RBP11.73□□□□□ -0.53
MTCL1-201ENST00000306329 A8MU10 97 aa11.71□□□□□ -0.53
MTCL1-201ENST00000306329 DNAH14Q0VDD8 3507 aa11.71□□□□□ -0.54
MTCL1-201ENST00000306329 KRTAP11-1Q8IUC1 163 aa11.7□□□□□ -0.54
MTCL1-201ENST00000306329 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
MTCL1-201ENST00000306329 WDFY4Q6ZS81 3184 aa11.69□□□□□ -0.54
MTCL1-201ENST00000306329 GCN1Q92616 2671 aaKnown RBP11.68□□□□□ -0.54
MTCL1-201ENST00000306329 NOTCH1P46531 2555 aa11.66□□□□□ -0.54
MTCL1-201ENST00000306329 KRTAP25-1Q3LHN0 102 aa11.66□□□□□ -0.54
MTCL1-201ENST00000306329 A6NN06 94 aa11.63□□□□□ -0.55
MTCL1-201ENST00000306329 STAB2Q8WWQ8 2551 aa11.62□□□□□ -0.55
MTCL1-201ENST00000306329 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
MTCL1-201ENST00000306329 A8MUU9 505 aa11.62□□□□□ -0.55
MTCL1-201ENST00000306329 VPS13AQ96RL7 3174 aa11.6□□□□□ -0.55
MTCL1-201ENST00000306329 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
MTCL1-201ENST00000306329 SETXQ7Z333 2677 aaKnown RBP11.57□□□□□ -0.56
MTCL1-201ENST00000306329 RPS29P62273 56 aaKnown RBP11.57□□□□□ -0.56
MTCL1-201ENST00000306329 C20orf166-AS1Q96NR2 134 aa11.56□□□□□ -0.56
MTCL1-201ENST00000306329 SZT2Q5T011 3432 aa11.55□□□□□ -0.56
MTCL1-201ENST00000306329 COL6A5A8TX70 2615 aa11.55□□□□□ -0.56
MTCL1-201ENST00000306329 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
MTCL1-201ENST00000306329 VCANP13611 3396 aa11.53□□□□□ -0.56
MTCL1-201ENST00000306329 Q6ZRN7 208 aaPredicted RBP11.52□□□□□ -0.57
MTCL1-201ENST00000306329 LAMA1P25391 3075 aa11.5□□□□□ -0.57
MTCL1-201ENST00000306329 KRTAP13-2Q52LG2 175 aa11.49□□□□□ -0.57
MTCL1-201ENST00000306329 NBEAL2Q6ZNJ1 2754 aa11.45□□□□□ -0.58
MTCL1-201ENST00000306329 ZNF292O60281 2723 aa11.45□□□□□ -0.58
MTCL1-201ENST00000306329 FRYQ5TBA9 3013 aa11.44□□□□□ -0.58
MTCL1-201ENST00000306329 NDUFAF8A1L188 74 aa11.42□□□□□ -0.58
MTCL1-201ENST00000306329 KRTAP13-1Q8IUC0 172 aa11.4□□□□□ -0.59
MTCL1-201ENST00000306329 DSPP15924 2871 aaKnown RBP11.38□□□□□ -0.59
MTCL1-201ENST00000306329 FREM2Q5SZK8 3169 aa11.3□□□□□ -0.6
MTCL1-201ENST00000306329 TNP1P09430 55 aa11.28□□□□□ -0.6
MTCL1-201ENST00000306329 UBR5O95071 2799 aaPredicted RBP11.24□□□□□ -0.61
MTCL1-201ENST00000306329 C10orf95Q9H7T3 257 aa11.23□□□□□ -0.61
MTCL1-201ENST00000306329 NBEAQ8NFP9 2946 aa11.23□□□□□ -0.61
MTCL1-201ENST00000306329 MAP1AP78559 2803 aaPredicted RBP11.22□□□□□ -0.61
MTCL1-201ENST00000306329 COL6A3P12111 3177 aa11.21□□□□□ -0.61
MTCL1-201ENST00000306329 KALRNO60229 2985 aa11.17□□□□□ -0.62
MTCL1-201ENST00000306329 FRYLO94915 3013 aa11.16□□□□□ -0.62
MTCL1-201ENST00000306329 SPTBN5Q9NRC6 3674 aaKnown RBP11.15□□□□□ -0.62
MTCL1-201ENST00000306329 NSD1Q96L73 2696 aaPredicted RBP11.13□□□□□ -0.63
MTCL1-201ENST00000306329 SPEGQ15772 3267 aa11.12□□□□□ -0.63
MTCL1-201ENST00000306329 BOD1L1Q8NFC6 3051 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms