RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 PLAC8Q9NZF1 115 aa8.57□□□□□ -1.04
HIPK3-201ENST00000303296 HECTD1Q9ULT8 2610 aa8.57□□□□□ -1.04
HIPK3-201ENST00000303296 CFAP46Q8IYW2 2715 aa8.54□□□□□ -1.04
HIPK3-201ENST00000303296 C5orf42Q9H799 3197 aa8.52□□□□□ -1.05
HIPK3-201ENST00000303296 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
HIPK3-201ENST00000303296 CYSTM1Q9H1C7 97 aa8.51□□□□□ -1.05
HIPK3-201ENST00000303296 AKAP13Q12802 2813 aa8.49□□□□□ -1.05
HIPK3-201ENST00000303296 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
HIPK3-201ENST00000303296 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
HIPK3-201ENST00000303296 A0A096LNT2 108 aa8.48□□□□□ -1.05
HIPK3-201ENST00000303296 ATRQ13535 2644 aa8.47□□□□□ -1.05
HIPK3-201ENST00000303296 A8MUU9 505 aa8.46□□□□□ -1.05
HIPK3-201ENST00000303296 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.06
HIPK3-201ENST00000303296 OXTP01178 125 aa8.45□□□□□ -1.06
HIPK3-201ENST00000303296 Q6ZR54 194 aa8.45□□□□□ -1.06
HIPK3-201ENST00000303296 PANO1I0J062 215 aa8.43□□□□□ -1.06
HIPK3-201ENST00000303296 A8MU10 97 aa8.42□□□□□ -1.06
HIPK3-201ENST00000303296 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
HIPK3-201ENST00000303296 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
HIPK3-201ENST00000303296 SPRR1BP22528 89 aa8.4□□□□□ -1.06
HIPK3-201ENST00000303296 MAST4O15021 2626 aa8.4□□□□□ -1.06
HIPK3-201ENST00000303296 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
HIPK3-201ENST00000303296 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
HIPK3-201ENST00000303296 CEP295Q9C0D2 2601 aa8.35□□□□□ -1.07
HIPK3-201ENST00000303296 NBEAL1Q6ZS30 2694 aa8.34□□□□□ -1.07
HIPK3-201ENST00000303296 PCNTO95613 3336 aa8.33□□□□□ -1.08
HIPK3-201ENST00000303296 EP400Q96L91 3159 aa8.33□□□□□ -1.08
HIPK3-201ENST00000303296 KRTAP1-3Q8IUG1 177 aa8.32□□□□□ -1.08
HIPK3-201ENST00000303296 STAB2Q8WWQ8 2551 aa8.32□□□□□ -1.08
HIPK3-201ENST00000303296 TNP1P09430 55 aa8.32□□□□□ -1.08
HIPK3-201ENST00000303296 SPRR1AP35321 89 aa8.29□□□□□ -1.08
HIPK3-201ENST00000303296 ITPR3Q14573 2671 aa8.27□□□□□ -1.08
HIPK3-201ENST00000303296 UTRNP46939 3433 aa8.27□□□□□ -1.09
HIPK3-201ENST00000303296 LCE6AA0A183 80 aa8.27□□□□□ -1.09
HIPK3-201ENST00000303296 KRTAP1-1Q07627 177 aa8.26□□□□□ -1.09
HIPK3-201ENST00000303296 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
HIPK3-201ENST00000303296 A0A087X002 238 aa8.24□□□□□ -1.09
HIPK3-201ENST00000303296 DNAH12Q6ZR08 3092 aa8.23□□□□□ -1.09
HIPK3-201ENST00000303296 P0C880 135 aa8.21□□□□□ -1.09
HIPK3-201ENST00000303296 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
HIPK3-201ENST00000303296 CFAP54Q96N23 3096 aa8.2□□□□□ -1.1
HIPK3-201ENST00000303296 CENPEQ02224 2701 aa8.2□□□□□ -1.1
HIPK3-201ENST00000303296 A0A0C4DFX4 3053 aa8.19□□□□□ -1.1
HIPK3-201ENST00000303296 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
HIPK3-201ENST00000303296 FLNBO75369 2602 aaKnown RBP8.17□□□□□ -1.1
HIPK3-201ENST00000303296 CHD6Q8TD26 2715 aa8.16□□□□□ -1.1
HIPK3-201ENST00000303296 FLNAP21333 2647 aaKnown RBP8.16□□□□□ -1.1
HIPK3-201ENST00000303296 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
HIPK3-201ENST00000303296 FREM2Q5SZK8 3169 aa8.12□□□□□ -1.11
HIPK3-201ENST00000303296 TEX15Q9BXT5 2789 aa8.1□□□□□ -1.11
HIPK3-201ENST00000303296 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
HIPK3-201ENST00000303296 REV3LO60673 3130 aa8.08□□□□□ -1.12
HIPK3-201ENST00000303296 LAMA2P24043 3122 aaKnown RBP8.07□□□□□ -1.12
HIPK3-201ENST00000303296 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
HIPK3-201ENST00000303296 COL6A5A8TX70 2615 aa8.04□□□□□ -1.12
HIPK3-201ENST00000303296 BAHCC1Q9P281 2608 aa8.03□□□□□ -1.12
HIPK3-201ENST00000303296 A6NN06 94 aa8.01□□□□□ -1.13
HIPK3-201ENST00000303296 UNC79Q9P2D8 2635 aa7.98□□□□□ -1.13
HIPK3-201ENST00000303296 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.14
HIPK3-201ENST00000303296 XIRP2A4UGR9 3374 aa7.94□□□□□ -1.14
HIPK3-201ENST00000303296 HELZ2Q9BYK8 2649 aaKnown RBP7.94□□□□□ -1.14
HIPK3-201ENST00000303296 KRTAP4-16G5E9R7 235 aaPredicted RBP7.91□□□□□ -1.14
HIPK3-201ENST00000303296 KRTAP11-1Q8IUC1 163 aa7.88□□□□□ -1.15
HIPK3-201ENST00000303296 CELSR3Q9NYQ7 3312 aa7.87□□□□□ -1.15
HIPK3-201ENST00000303296 NSD1Q96L73 2696 aaPredicted RBP7.83□□□□□ -1.16
HIPK3-201ENST00000303296 KRTAP10-10P60014 251 aa7.82□□□□□ -1.16
HIPK3-201ENST00000303296 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
HIPK3-201ENST00000303296 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
HIPK3-201ENST00000303296 FRYQ5TBA9 3013 aa7.79□□□□□ -1.16
HIPK3-201ENST00000303296 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
HIPK3-201ENST00000303296 TEP1Q99973 2627 aaKnown RBP7.77□□□□□ -1.17
HIPK3-201ENST00000303296 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
HIPK3-201ENST00000303296 CRYBG3Q68DQ2 2970 aa7.77□□□□□ -1.17
HIPK3-201ENST00000303296 IGSF10Q6WRI0 2623 aa7.76□□□□□ -1.17
HIPK3-201ENST00000303296 RANBP2P49792 3224 aaKnown RBP7.75□□□□□ -1.17
HIPK3-201ENST00000303296 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
HIPK3-201ENST00000303296 TRIOO75962 3097 aa7.74□□□□□ -1.17
HIPK3-201ENST00000303296 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
HIPK3-201ENST00000303296 GCN1Q92616 2671 aaKnown RBP7.72□□□□□ -1.17
HIPK3-201ENST00000303296 UNC80Q8N2C7 3258 aa7.7□□□□□ -1.18
HIPK3-201ENST00000303296 KMT2BQ9UMN6 2715 aaPredicted RBP7.69□□□□□ -1.18
HIPK3-201ENST00000303296 APCP25054 2843 aa7.68□□□□□ -1.18
HIPK3-201ENST00000303296 MKI67P46013 3256 aaKnown RBP7.65□□□□□ -1.18
HIPK3-201ENST00000303296 NBEAL2Q6ZNJ1 2754 aa7.65□□□□□ -1.18
HIPK3-201ENST00000303296 WDFY4Q6ZS81 3184 aa7.64□□□□□ -1.19
HIPK3-201ENST00000303296 VPS13AQ96RL7 3174 aa7.59□□□□□ -1.19
HIPK3-201ENST00000303296 MGAQ8IWI9 3026 aa7.58□□□□□ -1.2
HIPK3-201ENST00000303296 ITPR2Q14571 2701 aa7.56□□□□□ -1.2
HIPK3-201ENST00000303296 TRANK1O15050 2925 aa7.55□□□□□ -1.2
HIPK3-201ENST00000303296 HTTP42858 3142 aa7.54□□□□□ -1.2
HIPK3-201ENST00000303296 DSPP15924 2871 aaKnown RBP7.54□□□□□ -1.2
HIPK3-201ENST00000303296 H0YAA0 97 aa7.52□□□□□ -1.21
HIPK3-201ENST00000303296 XP32Q5T750 250 aa7.51□□□□□ -1.21
HIPK3-201ENST00000303296 KRTAP7-1Q8IUC3 87 aa7.5□□□□□ -1.21
HIPK3-201ENST00000303296 UBR5O95071 2799 aaPredicted RBP7.49□□□□□ -1.21
HIPK3-201ENST00000303296 PRUNE2Q8WUY3 3088 aa7.48□□□□□ -1.21
HIPK3-201ENST00000303296 CFAP47Q6ZTR5 3102 aa7.48□□□□□ -1.21
HIPK3-201ENST00000303296 KALRNO60229 2985 aa7.46□□□□□ -1.21
HIPK3-201ENST00000303296 ZNF292O60281 2723 aa7.46□□□□□ -1.21
HIPK3-201ENST00000303296 LAMA3Q16787 3333 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms