RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 FAM229AH3BQW9 127 aa13.41□□□□□ -0.26
LTBP3-201ENST00000301873 A8MUN3 132 aa13.41□□□□□ -0.26
LTBP3-201ENST00000301873 LOC101927531A0A1B0GV80 90 aa13.39□□□□□ -0.27
LTBP3-201ENST00000301873 C8orf17Q9NRJ1 99 aa13.38□□□□□ -0.27
LTBP3-201ENST00000301873 PLA2G2DQ9UNK4 145 aa13.38□□□□□ -0.27
LTBP3-201ENST00000301873 H7BZZ5 65 aa13.38□□□□□ -0.27
LTBP3-201ENST00000301873 ATP11AUNQ6ZP68 121 aa13.37□□□□□ -0.27
LTBP3-201ENST00000301873 OBSCN-AS1Q96MR7 158 aa13.37□□□□□ -0.27
LTBP3-201ENST00000301873 DSCR10P59022 87 aa13.35□□□□□ -0.27
LTBP3-201ENST00000301873 COA5Q86WW8 74 aa13.34□□□□□ -0.27
LTBP3-201ENST00000301873 PSORS1C2Q9UIG4 136 aa13.34□□□□□ -0.27
LTBP3-201ENST00000301873 C8orf87E5RJ46 101 aa13.33□□□□□ -0.28
LTBP3-201ENST00000301873 SSBP3-AS1Q7Z2R9 100 aa13.33□□□□□ -0.28
LTBP3-201ENST00000301873 ITPR2Q14571 2701 aa13.32□□□□□ -0.28
LTBP3-201ENST00000301873 SMR3BP02814 79 aaPredicted RBP13.31□□□□□ -0.28
LTBP3-201ENST00000301873 APLNQ9ULZ1 77 aa13.31□□□□□ -0.28
LTBP3-201ENST00000301873 A0A1B0GVX0 72 aa13.31□□□□□ -0.28
LTBP3-201ENST00000301873 CNBPP62633 177 aaKnown RBP13.28□□□□□ -0.28
LTBP3-201ENST00000301873 UTP20O75691 2785 aaKnown RBP13.28□□□□□ -0.28
LTBP3-201ENST00000301873 IGLV5-48A0A075B6I7 105 aa13.27□□□□□ -0.28
LTBP3-201ENST00000301873 WDFY3Q8IZQ1 3526 aa13.27□□□□□ -0.29
LTBP3-201ENST00000301873 CELSR2Q9HCU4 2923 aa13.25□□□□□ -0.29
LTBP3-201ENST00000301873 LINC01600Q96MT4 127 aa13.24□□□□□ -0.29
LTBP3-201ENST00000301873 SPRR4Q96PI1 79 aa13.24□□□□□ -0.29
LTBP3-201ENST00000301873 LRBAP50851 2863 aa13.24□□□□□ -0.29
LTBP3-201ENST00000301873 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
LTBP3-201ENST00000301873 DMBT1Q9UGM3 2413 aaPredicted RBP13.23□□□□□ -0.29
LTBP3-201ENST00000301873 IGLV7-43P04211 117 aa13.22□□□□□ -0.29
LTBP3-201ENST00000301873 LOC400499M0QZD8 3231 aa13.21□□□□□ -0.29
LTBP3-201ENST00000301873 Q8NDZ9 215 aa13.19□□□□□ -0.3
LTBP3-201ENST00000301873 HIVEP1P15822 2718 aa13.19□□□□□ -0.3
LTBP3-201ENST00000301873 LINC00336Q6ZUF6 198 aa13.19□□□□□ -0.3
LTBP3-201ENST00000301873 LINC00304Q8N9R0 145 aa13.18□□□□□ -0.3
LTBP3-201ENST00000301873 C9orf92A6NGG3 77 aa13.16□□□□□ -0.3
LTBP3-201ENST00000301873 IGLV5-37A0A075B6J1 123 aa13.15□□□□□ -0.3
LTBP3-201ENST00000301873 ZANQ9Y493 2812 aa13.12□□□□□ -0.31
LTBP3-201ENST00000301873 CYP4F30PQ9H0H9 118 aa13.1□□□□□ -0.31
LTBP3-201ENST00000301873 TNP2Q05952 138 aa13.09□□□□□ -0.31
LTBP3-201ENST00000301873 UQCR11O14957 56 aa13.09□□□□□ -0.31
LTBP3-201ENST00000301873 WIPF1O43516 503 aa13.09□□□□□ -0.31
LTBP3-201ENST00000301873 KMT2BQ9UMN6 2715 aaPredicted RBP13.09□□□□□ -0.31
LTBP3-201ENST00000301873 OCR1Q9BZK8 76 aa13.08□□□□□ -0.32
LTBP3-201ENST00000301873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.08□□□□□ -0.32
LTBP3-201ENST00000301873 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
LTBP3-201ENST00000301873 DCHS2Q6V1P9 2916 aa13□□□□□ -0.33
LTBP3-201ENST00000301873 TENM4Q6N022 2769 aa13□□□□□ -0.33
LTBP3-201ENST00000301873 PRR26Q8N8Z3 221 aa12.98□□□□□ -0.33
LTBP3-201ENST00000301873 APCP25054 2843 aa12.97□□□□□ -0.33
LTBP3-201ENST00000301873 Q8N1X5 172 aa12.95□□□□□ -0.34
LTBP3-201ENST00000301873 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
LTBP3-201ENST00000301873 DCHS1Q96JQ0 3298 aa12.94□□□□□ -0.34
LTBP3-201ENST00000301873 J3QL48 77 aa12.94□□□□□ -0.34
LTBP3-201ENST00000301873 MIR22HGQ0VDD5 57 aa12.94□□□□□ -0.34
LTBP3-201ENST00000301873 SPANXA2-OT1Q8N9U9 137 aa12.93□□□□□ -0.34
LTBP3-201ENST00000301873 SPRR1AP35321 89 aa12.91□□□□□ -0.34
LTBP3-201ENST00000301873 NF1P21359 2839 aa12.89□□□□□ -0.35
LTBP3-201ENST00000301873 ZFHX4Q86UP3 3567 aa12.88□□□□□ -0.35
LTBP3-201ENST00000301873 KRTAP1-5Q9BYS1 174 aa12.88□□□□□ -0.35
LTBP3-201ENST00000301873 CYSTM1Q9H1C7 97 aa12.88□□□□□ -0.35
LTBP3-201ENST00000301873 DMDP11532 3685 aa12.86□□□□□ -0.35
LTBP3-201ENST00000301873 DMXL1Q9Y485 3027 aa12.85□□□□□ -0.35
LTBP3-201ENST00000301873 ASPMQ8IZT6 3477 aa12.85□□□□□ -0.35
LTBP3-201ENST00000301873 COX6B2Q6YFQ2 88 aa12.82□□□□□ -0.36
LTBP3-201ENST00000301873 KRTAP26-1Q6PEX3 210 aa12.81□□□□□ -0.36
LTBP3-201ENST00000301873 FBN2P35556 2912 aa12.77□□□□□ -0.37
LTBP3-201ENST00000301873 MMP24-AS1A0A0U1RRL7 71 aa12.75□□□□□ -0.37
LTBP3-201ENST00000301873 SPINT4Q6UDR6 99 aa12.74□□□□□ -0.37
LTBP3-201ENST00000301873 CD164Q04900 197 aa12.73□□□□□ -0.37
LTBP3-201ENST00000301873 IGLV7-46A0A075B6I9 117 aa12.72□□□□□ -0.37
LTBP3-201ENST00000301873 PLAC8Q9NZF1 115 aa12.72□□□□□ -0.37
LTBP3-201ENST00000301873 HRES1P13985 223 aa12.72□□□□□ -0.37
LTBP3-201ENST00000301873 Q8N9P0 234 aaPredicted RBP12.71□□□□□ -0.38
LTBP3-201ENST00000301873 A0A0D9SG42 100 aa12.7□□□□□ -0.38
LTBP3-201ENST00000301873 LINC00472Q9H8W2 130 aa12.68□□□□□ -0.38
LTBP3-201ENST00000301873 LINC01554Q52M75 96 aa12.67□□□□□ -0.38
LTBP3-201ENST00000301873 SPRR1BP22528 89 aa12.66□□□□□ -0.38
LTBP3-201ENST00000301873 SMG1Q96Q15 3661 aaKnown RBP12.66□□□□□ -0.38
LTBP3-201ENST00000301873 Q1T7F1 81 aa12.65□□□□□ -0.38
LTBP3-201ENST00000301873 FAM229BQ4G0N7 80 aa12.65□□□□□ -0.38
LTBP3-201ENST00000301873 CDC42SE1Q9NRR8 79 aa12.64□□□□□ -0.39
LTBP3-201ENST00000301873 TENM3Q9P273 2699 aa12.62□□□□□ -0.39
LTBP3-201ENST00000301873 CRIPTQ9P021 101 aa12.62□□□□□ -0.39
LTBP3-201ENST00000301873 KTN1-AS1Q86SY8 53 aa12.61□□□□□ -0.39
LTBP3-201ENST00000301873 FP248Q71RG6 208 aaPredicted RBP12.61□□□□□ -0.39
LTBP3-201ENST00000301873 RBM12B-AS1Q9P1G2 102 aa12.6□□□□□ -0.39
LTBP3-201ENST00000301873 HRNRQ86YZ3 2850 aaPredicted RBP12.58□□□□□ -0.39
LTBP3-201ENST00000301873 LAMA5O15230 3695 aa12.56□□□□□ -0.4
LTBP3-201ENST00000301873 CSMD1Q96PZ7 3565 aa12.55□□□□□ -0.4
LTBP3-201ENST00000301873 PANO1I0J062 215 aa12.55□□□□□ -0.4
LTBP3-201ENST00000301873 Q5XG85 94 aa12.55□□□□□ -0.4
LTBP3-201ENST00000301873 OXTP01178 125 aa12.5□□□□□ -0.41
LTBP3-201ENST00000301873 KRTAP4-16G5E9R7 235 aaPredicted RBP12.5□□□□□ -0.41
LTBP3-201ENST00000301873 LCA10Q71F78 164 aa12.5□□□□□ -0.41
LTBP3-201ENST00000301873 Q5W150 140 aa12.47□□□□□ -0.41
LTBP3-201ENST00000301873 KRTAP10-2P60368 255 aa12.47□□□□□ -0.41
LTBP3-201ENST00000301873 Q6ZSA8 131 aa12.46□□□□□ -0.41
LTBP3-201ENST00000301873 ZCCHC13Q8WW36 166 aaKnown RBP12.46□□□□□ -0.41
LTBP3-201ENST00000301873 A0A1B0GU33 70 aa12.45□□□□□ -0.42
LTBP3-201ENST00000301873 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
LTBP3-201ENST00000301873 RELNP78509 3460 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms