RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 Q1T7F1 81 aa10.09□□□□□ -0.79
ARHGEF28-201ENST00000296794 KTN1-AS1Q86SY8 53 aa10.08□□□□□ -0.8
ARHGEF28-201ENST00000296794 VPS13AQ96RL7 3174 aa10.08□□□□□ -0.8
ARHGEF28-201ENST00000296794 CD164Q04900 197 aa10.07□□□□□ -0.8
ARHGEF28-201ENST00000296794 Q5XG85 94 aa10.06□□□□□ -0.8
ARHGEF28-201ENST00000296794 GCN1Q92616 2671 aaKnown RBP10.06□□□□□ -0.8
ARHGEF28-201ENST00000296794 CDC42SE1Q9NRR8 79 aa10.03□□□□□ -0.8
ARHGEF28-201ENST00000296794 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
ARHGEF28-201ENST00000296794 SPRR1AP35321 89 aa10.01□□□□□ -0.81
ARHGEF28-201ENST00000296794 FAM229BQ4G0N7 80 aa10.01□□□□□ -0.81
ARHGEF28-201ENST00000296794 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
ARHGEF28-201ENST00000296794 FRYQ5TBA9 3013 aa10□□□□□ -0.81
ARHGEF28-201ENST00000296794 FP248Q71RG6 208 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-201ENST00000296794 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
ARHGEF28-201ENST00000296794 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
ARHGEF28-201ENST00000296794 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF28-201ENST00000296794 NSD1Q96L73 2696 aaPredicted RBP9.97□□□□□ -0.81
ARHGEF28-201ENST00000296794 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.81
ARHGEF28-201ENST00000296794 LCA10Q71F78 164 aa9.96□□□□□ -0.82
ARHGEF28-201ENST00000296794 Q8N1X5 172 aa9.95□□□□□ -0.82
ARHGEF28-201ENST00000296794 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF28-201ENST00000296794 MMP24-AS1A0A0U1RRL7 71 aa9.94□□□□□ -0.82
ARHGEF28-201ENST00000296794 OXTP01178 125 aa9.9□□□□□ -0.82
ARHGEF28-201ENST00000296794 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
ARHGEF28-201ENST00000296794 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
ARHGEF28-201ENST00000296794 CELSR3Q9NYQ7 3312 aa9.89□□□□□ -0.83
ARHGEF28-201ENST00000296794 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF28-201ENST00000296794 Q75L30 129 aa9.88□□□□□ -0.83
ARHGEF28-201ENST00000296794 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
ARHGEF28-201ENST00000296794 HRES1P13985 223 aa9.87□□□□□ -0.83
ARHGEF28-201ENST00000296794 NBEAQ8NFP9 2946 aa9.85□□□□□ -0.83
ARHGEF28-201ENST00000296794 LINC00472Q9H8W2 130 aa9.85□□□□□ -0.83
ARHGEF28-201ENST00000296794 LAMA1P25391 3075 aa9.85□□□□□ -0.83
ARHGEF28-201ENST00000296794 Q6ZSA8 131 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 FREM2Q5SZK8 3169 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 SPRR1BP22528 89 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 VCANP13611 3396 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 DMBT1Q9UGM3 2413 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF28-201ENST00000296794 FLNCQ14315 2725 aa9.82□□□□□ -0.84
ARHGEF28-201ENST00000296794 DNAH14Q0VDD8 3507 aa9.82□□□□□ -0.84
ARHGEF28-201ENST00000296794 LINC01558Q9Y6Z2 57 aa9.82□□□□□ -0.84
ARHGEF28-201ENST00000296794 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
ARHGEF28-201ENST00000296794 LCE6AA0A183 80 aa9.81□□□□□ -0.84
ARHGEF28-201ENST00000296794 CRIPTQ9P021 101 aa9.81□□□□□ -0.84
ARHGEF28-201ENST00000296794 ITPR1Q14643 2758 aa9.79□□□□□ -0.84
ARHGEF28-201ENST00000296794 SZT2Q5T011 3432 aa9.79□□□□□ -0.84
ARHGEF28-201ENST00000296794 Q5VV11 94 aa9.78□□□□□ -0.84
ARHGEF28-201ENST00000296794 KRTAP1-5Q9BYS1 174 aa9.78□□□□□ -0.84
ARHGEF28-201ENST00000296794 KALRNO60229 2985 aa9.76□□□□□ -0.85
ARHGEF28-201ENST00000296794 A0A0D9SG42 100 aa9.75□□□□□ -0.85
ARHGEF28-201ENST00000296794 REV3LO60673 3130 aa9.74□□□□□ -0.85
ARHGEF28-201ENST00000296794 KRTAP4-16G5E9R7 235 aaPredicted RBP9.71□□□□□ -0.86
ARHGEF28-201ENST00000296794 TACC2O95359 2948 aa9.7□□□□□ -0.86
ARHGEF28-201ENST00000296794 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
ARHGEF28-201ENST00000296794 Q5W150 140 aa9.69□□□□□ -0.86
ARHGEF28-201ENST00000296794 A0A1B0GU33 70 aa9.67□□□□□ -0.86
ARHGEF28-201ENST00000296794 SPINK7P58062 85 aa9.66□□□□□ -0.86
ARHGEF28-201ENST00000296794 Q5VSD8 79 aa9.66□□□□□ -0.86
ARHGEF28-201ENST00000296794 M0R2T5 61 aa9.65□□□□□ -0.86
ARHGEF28-201ENST00000296794 TENM4Q6N022 2769 aa9.65□□□□□ -0.87
ARHGEF28-201ENST00000296794 ADGRG4Q8IZF6 3080 aa9.64□□□□□ -0.87
ARHGEF28-201ENST00000296794 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
ARHGEF28-201ENST00000296794 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
ARHGEF28-201ENST00000296794 ATMQ13315 3056 aa9.63□□□□□ -0.87
ARHGEF28-201ENST00000296794 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
ARHGEF28-201ENST00000296794 HIVEP1P15822 2718 aa9.61□□□□□ -0.87
ARHGEF28-201ENST00000296794 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
ARHGEF28-201ENST00000296794 BOD1L1Q8NFC6 3051 aa9.61□□□□□ -0.87
ARHGEF28-201ENST00000296794 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF28-201ENST00000296794 FRYLO94915 3013 aa9.59□□□□□ -0.87
ARHGEF28-201ENST00000296794 COL12A1Q99715 3063 aa9.58□□□□□ -0.88
ARHGEF28-201ENST00000296794 LRBAP50851 2863 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 LINC00483Q53H64 154 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 Q6ZR54 194 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 PANO1I0J062 215 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
ARHGEF28-201ENST00000296794 KMT2BQ9UMN6 2715 aaPredicted RBP9.54□□□□□ -0.88
ARHGEF28-201ENST00000296794 COL6A3P12111 3177 aa9.51□□□□□ -0.89
ARHGEF28-201ENST00000296794 DMXL2Q8TDJ6 3036 aa9.49□□□□□ -0.89
ARHGEF28-201ENST00000296794 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
ARHGEF28-201ENST00000296794 CSAG1Q6PB30 78 aa9.49□□□□□ -0.89
ARHGEF28-201ENST00000296794 UTP20O75691 2785 aaKnown RBP9.46□□□□□ -0.89
ARHGEF28-201ENST00000296794 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
ARHGEF28-201ENST00000296794 NIPBLQ6KC79 2804 aaeCLIP9.43□□□□□ -0.9
ARHGEF28-201ENST00000296794 KRTAP21-3Q3LHN1 58 aa9.43□□□□□ -0.9
ARHGEF28-201ENST00000296794 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
ARHGEF28-201ENST00000296794 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
ARHGEF28-201ENST00000296794 ASH1LQ9NR48 2969 aaKnown RBP9.42□□□□□ -0.9
ARHGEF28-201ENST00000296794 SPEGQ15772 3267 aa9.4□□□□□ -0.91
ARHGEF28-201ENST00000296794 A0A087X002 238 aa9.39□□□□□ -0.91
ARHGEF28-201ENST00000296794 NOTCH2NLQ7Z3S9 236 aa9.39□□□□□ -0.91
ARHGEF28-201ENST00000296794 S4R3F8 94 aa9.36□□□□□ -0.91
ARHGEF28-201ENST00000296794 APCP25054 2843 aa9.34□□□□□ -0.91
ARHGEF28-201ENST00000296794 ZZEF1O43149 2961 aa9.32□□□□□ -0.92
ARHGEF28-201ENST00000296794 CRYBG3Q68DQ2 2970 aa9.31□□□□□ -0.92
ARHGEF28-201ENST00000296794 SPTBN5Q9NRC6 3674 aaKnown RBP9.3□□□□□ -0.92
ARHGEF28-201ENST00000296794 CFAP47Q6ZTR5 3102 aa9.3□□□□□ -0.92
ARHGEF28-201ENST00000296794 CELSR2Q9HCU4 2923 aa9.29□□□□□ -0.92
ARHGEF28-201ENST00000296794 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms