RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 C5orf42Q9H799 3197 aa10.14□□□□□ -0.79
LRRC58-201ENST00000295628 CEP350Q5VT06 3117 aa10.13□□□□□ -0.79
LRRC58-201ENST00000295628 Q8NDZ9 215 aa10.13□□□□□ -0.79
LRRC58-201ENST00000295628 PLAC8Q9NZF1 115 aa10.12□□□□□ -0.79
LRRC58-201ENST00000295628 LINC00472Q9H8W2 130 aa10.1□□□□□ -0.79
LRRC58-201ENST00000295628 PCNTO95613 3336 aa10.05□□□□□ -0.8
LRRC58-201ENST00000295628 KRTAP26-1Q6PEX3 210 aa10.02□□□□□ -0.81
LRRC58-201ENST00000295628 EPG5Q9HCE0 2579 aa10.01□□□□□ -0.81
LRRC58-201ENST00000295628 OXTP01178 125 aa9.98□□□□□ -0.81
LRRC58-201ENST00000295628 Q6ZR54 194 aa9.97□□□□□ -0.81
LRRC58-201ENST00000295628 NDUFAF8A1L188 74 aa9.96□□□□□ -0.81
LRRC58-201ENST00000295628 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
LRRC58-201ENST00000295628 SPRR1AP35321 89 aa9.94□□□□□ -0.82
LRRC58-201ENST00000295628 MGAM2Q2M2H8 2515 aa9.93□□□□□ -0.82
LRRC58-201ENST00000295628 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
LRRC58-201ENST00000295628 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
LRRC58-201ENST00000295628 CEP295Q9C0D2 2601 aa9.92□□□□□ -0.82
LRRC58-201ENST00000295628 KRTAP1-3Q8IUG1 177 aa9.91□□□□□ -0.82
LRRC58-201ENST00000295628 PANO1I0J062 215 aa9.9□□□□□ -0.82
LRRC58-201ENST00000295628 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
LRRC58-201ENST00000295628 CFAP46Q8IYW2 2715 aa9.89□□□□□ -0.83
LRRC58-201ENST00000295628 CFAP54Q96N23 3096 aa9.89□□□□□ -0.83
LRRC58-201ENST00000295628 A8MU10 97 aa9.88□□□□□ -0.83
LRRC58-201ENST00000295628 C10orf95Q9H7T3 257 aa9.87□□□□□ -0.83
LRRC58-201ENST00000295628 A8MUU9 505 aa9.85□□□□□ -0.83
LRRC58-201ENST00000295628 KRTAP10-1P60331 282 aa9.82□□□□□ -0.84
LRRC58-201ENST00000295628 SPRR1BP22528 89 aa9.82□□□□□ -0.84
LRRC58-201ENST00000295628 KRTAP1-1Q07627 177 aa9.81□□□□□ -0.84
LRRC58-201ENST00000295628 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
LRRC58-201ENST00000295628 HECTD1Q9ULT8 2610 aa9.79□□□□□ -0.84
LRRC58-201ENST00000295628 NBEAL1Q6ZS30 2694 aa9.78□□□□□ -0.84
LRRC58-201ENST00000295628 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
LRRC58-201ENST00000295628 A0A0C4DFX4 3053 aa9.73□□□□□ -0.85
LRRC58-201ENST00000295628 CENPEQ02224 2701 aa9.72□□□□□ -0.85
LRRC58-201ENST00000295628 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
LRRC58-201ENST00000295628 FLNAP21333 2647 aaKnown RBP9.71□□□□□ -0.85
LRRC58-201ENST00000295628 REV3LO60673 3130 aa9.7□□□□□ -0.86
LRRC58-201ENST00000295628 ITPR3Q14573 2671 aa9.69□□□□□ -0.86
LRRC58-201ENST00000295628 A0A087X002 238 aa9.68□□□□□ -0.86
LRRC58-201ENST00000295628 A6NN06 94 aa9.68□□□□□ -0.86
LRRC58-201ENST00000295628 TNP1P09430 55 aa9.65□□□□□ -0.86
LRRC58-201ENST00000295628 ATRQ13535 2644 aa9.65□□□□□ -0.86
LRRC58-201ENST00000295628 NOTCH2NLQ7Z3S9 236 aa9.65□□□□□ -0.86
LRRC58-201ENST00000295628 CHD6Q8TD26 2715 aa9.64□□□□□ -0.87
LRRC58-201ENST00000295628 LAMA2P24043 3122 aaKnown RBP9.63□□□□□ -0.87
LRRC58-201ENST00000295628 STAB1Q9NY15 2570 aa9.63□□□□□ -0.87
LRRC58-201ENST00000295628 FREM2Q5SZK8 3169 aa9.62□□□□□ -0.87
LRRC58-201ENST00000295628 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
LRRC58-201ENST00000295628 LCE6AA0A183 80 aa9.57□□□□□ -0.88
LRRC58-201ENST00000295628 MAST4O15021 2626 aa9.56□□□□□ -0.88
LRRC58-201ENST00000295628 CELSR3Q9NYQ7 3312 aa9.55□□□□□ -0.88
LRRC58-201ENST00000295628 MKI67P46013 3256 aaKnown RBP9.51□□□□□ -0.89
LRRC58-201ENST00000295628 TEX15Q9BXT5 2789 aa9.49□□□□□ -0.89
LRRC58-201ENST00000295628 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
LRRC58-201ENST00000295628 KRTAP4-16G5E9R7 235 aaPredicted RBP9.46□□□□□ -0.89
LRRC58-201ENST00000295628 RANBP2P49792 3224 aaKnown RBP9.46□□□□□ -0.9
LRRC58-201ENST00000295628 TRIOO75962 3097 aa9.43□□□□□ -0.9
LRRC58-201ENST00000295628 COL6A5A8TX70 2615 aa9.41□□□□□ -0.9
LRRC58-201ENST00000295628 KRTAP10-8P60410 259 aa9.4□□□□□ -0.9
LRRC58-201ENST00000295628 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
LRRC58-201ENST00000295628 DNAH14Q0VDD8 3507 aa9.36□□□□□ -0.91
LRRC58-201ENST00000295628 NOTCH1P46531 2555 aa9.36□□□□□ -0.91
LRRC58-201ENST00000295628 FLNBO75369 2602 aaKnown RBP9.34□□□□□ -0.91
LRRC58-201ENST00000295628 UNC79Q9P2D8 2635 aa9.33□□□□□ -0.92
LRRC58-201ENST00000295628 GCN1Q92616 2671 aaKnown RBP9.32□□□□□ -0.92
LRRC58-201ENST00000295628 HELZ2Q9BYK8 2649 aaKnown RBP9.31□□□□□ -0.92
LRRC58-201ENST00000295628 RPS29P62273 56 aaKnown RBP9.3□□□□□ -0.92
LRRC58-201ENST00000295628 VPS13AQ96RL7 3174 aa9.27□□□□□ -0.93
LRRC58-201ENST00000295628 P0C880 135 aa9.26□□□□□ -0.93
LRRC58-201ENST00000295628 A0A1B0GVY2 172 aa9.25□□□□□ -0.93
LRRC58-201ENST00000295628 APCP25054 2843 aa9.23□□□□□ -0.93
LRRC58-201ENST00000295628 PP632Q6XCG6 107 aa9.22□□□□□ -0.93
LRRC58-201ENST00000295628 UNC80Q8N2C7 3258 aa9.21□□□□□ -0.93
LRRC58-201ENST00000295628 WDFY4Q6ZS81 3184 aa9.19□□□□□ -0.94
LRRC58-201ENST00000295628 KRTAP13-2Q52LG2 175 aa9.18□□□□□ -0.94
LRRC58-201ENST00000295628 BRCA2P51587 3418 aa9.17□□□□□ -0.94
LRRC58-201ENST00000295628 CHD7Q9P2D1 2997 aa9.16□□□□□ -0.94
LRRC58-201ENST00000295628 NBEAL2Q6ZNJ1 2754 aa9.15□□□□□ -0.94
LRRC58-201ENST00000295628 MGAQ8IWI9 3026 aa9.15□□□□□ -0.94
LRRC58-201ENST00000295628 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
LRRC58-201ENST00000295628 KMT2BQ9UMN6 2715 aaPredicted RBP9.13□□□□□ -0.95
LRRC58-201ENST00000295628 FRYQ5TBA9 3013 aa9.12□□□□□ -0.95
LRRC58-201ENST00000295628 DSPP15924 2871 aaKnown RBP9.09□□□□□ -0.95
LRRC58-201ENST00000295628 KALRNO60229 2985 aa9.07□□□□□ -0.96
LRRC58-201ENST00000295628 CRYBG3Q68DQ2 2970 aa9.05□□□□□ -0.96
LRRC58-201ENST00000295628 LAMA3Q16787 3333 aa9.05□□□□□ -0.96
LRRC58-201ENST00000295628 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
LRRC58-201ENST00000295628 CDH23Q9H251 3354 aa9.04□□□□□ -0.96
LRRC58-201ENST00000295628 PRUNE2Q8WUY3 3088 aa9.04□□□□□ -0.96
LRRC58-201ENST00000295628 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
LRRC58-201ENST00000295628 NSD1Q96L73 2696 aaPredicted RBP9□□□□□ -0.97
LRRC58-201ENST00000295628 H0YAA0 97 aa9□□□□□ -0.97
LRRC58-201ENST00000295628 TEP1Q99973 2627 aaKnown RBP8.99□□□□□ -0.97
LRRC58-201ENST00000295628 PRO2289Q9P1D8 64 aa8.97□□□□□ -0.97
LRRC58-201ENST00000295628 COL6A3P12111 3177 aa8.97□□□□□ -0.97
LRRC58-201ENST00000295628 BAHCC1Q9P281 2608 aa8.95□□□□□ -0.98
LRRC58-201ENST00000295628 KRTAP10-10P60014 251 aa8.95□□□□□ -0.98
LRRC58-201ENST00000295628 CFAP47Q6ZTR5 3102 aa8.93□□□□□ -0.98
LRRC58-201ENST00000295628 SZT2Q5T011 3432 aa8.93□□□□□ -0.98
LRRC58-201ENST00000295628 KRTAP13-1Q8IUC0 172 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms