RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 MOBPQ13875 183 aa13.2□□□□□ -0.3
LINC01116-201ENST00000295549 NAA38Q9BRA0 125 aaKnown RBP13.2□□□□□ -0.3
LINC01116-201ENST00000295549 HERC1Q15751 4861 aa13.2□□□□□ -0.3
LINC01116-201ENST00000295549 TAX1BP3O14907 124 aa13.19□□□□□ -0.3
LINC01116-201ENST00000295549 LST1O00453 97 aa13.18□□□□□ -0.3
LINC01116-201ENST00000295549 DNAL4O96015 105 aa13.17□□□□□ -0.3
LINC01116-201ENST00000295549 GHRHP01286 108 aa13.17□□□□□ -0.3
LINC01116-201ENST00000295549 TRACP01848 142 aa13.17□□□□□ -0.3
LINC01116-201ENST00000295549 Q8NBF4 154 aa13.17□□□□□ -0.3
LINC01116-201ENST00000295549 C9orf118A6NHY6 69 aa13.16□□□□□ -0.3
LINC01116-201ENST00000295549 C9orf153Q5TBE3 101 aa13.16□□□□□ -0.3
LINC01116-201ENST00000295549 LINC00304Q8N9R0 145 aa13.16□□□□□ -0.3
LINC01116-201ENST00000295549 H3BUT2 72 aa13.15□□□□□ -0.3
LINC01116-201ENST00000295549 COL5A1-AS1Q5SY13 56 aa13.14□□□□□ -0.31
LINC01116-201ENST00000295549 LYRM7Q5U5X0 104 aa13.14□□□□□ -0.31
LINC01116-201ENST00000295549 ORMDL1Q9P0S3 153 aa13.12□□□□□ -0.31
LINC01116-201ENST00000295549 H3BQ85 93 aa13.11□□□□□ -0.31
LINC01116-201ENST00000295549 TCL1BO95988 128 aa13.11□□□□□ -0.31
LINC01116-201ENST00000295549 ATXN8Q156A1 80 aa13.11□□□□□ -0.31
LINC01116-201ENST00000295549 SPAG11AQ6PDA7 123 aa13.11□□□□□ -0.31
LINC01116-201ENST00000295549 F8WEM9 126 aa13.1□□□□□ -0.31
LINC01116-201ENST00000295549 TRBV20-1A0A075B6N2 111 aa13.08□□□□□ -0.32
LINC01116-201ENST00000295549 C4orf48Q5BLP8 95 aa13.08□□□□□ -0.32
LINC01116-201ENST00000295549 IGLV8-61A0A075B6I0 122 aa13.07□□□□□ -0.32
LINC01116-201ENST00000295549 A0A1W2PPM0 123 aa13.07□□□□□ -0.32
LINC01116-201ENST00000295549 TMEM256-PLSCR3K7ERE1 68 aa13.06□□□□□ -0.32
LINC01116-201ENST00000295549 FABP2P12104 132 aa13.06□□□□□ -0.32
LINC01116-201ENST00000295549 SPINK1P00995 79 aa13.05□□□□□ -0.32
LINC01116-201ENST00000295549 NDUFV3P56181 108 aaKnown RBP13.05□□□□□ -0.32
LINC01116-201ENST00000295549 Q6JHZ5 121 aa13.02□□□□□ -0.33
LINC01116-201ENST00000295549 RPS29P62273 56 aaKnown RBP13□□□□□ -0.33
LINC01116-201ENST00000295549 BAALC-AS2P0C853 105 aa12.99□□□□□ -0.33
LINC01116-201ENST00000295549 CD164Q04900 197 aa12.99□□□□□ -0.33
LINC01116-201ENST00000295549 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
LINC01116-201ENST00000295549 H3BMG7 143 aa12.97□□□□□ -0.33
LINC01116-201ENST00000295549 A0A0G2JQZ4 141 aa12.96□□□□□ -0.34
LINC01116-201ENST00000295549 IGFL1Q6UW32 110 aa12.96□□□□□ -0.34
LINC01116-201ENST00000295549 HRCT1Q6UXD1 115 aa12.93□□□□□ -0.34
LINC01116-201ENST00000295549 SPCS1Q9Y6A9 102 aa12.93□□□□□ -0.34
LINC01116-201ENST00000295549 ANKRD29Q8N6D5 301 aa12.92□□□□□ -0.34
LINC01116-201ENST00000295549 C9JAW5 83 aa12.91□□□□□ -0.34
LINC01116-201ENST00000295549 HMCN2Q8NDA2 5059 aa12.89□□□□□ -0.35
LINC01116-201ENST00000295549 LIMD2Q9BT23 127 aa12.88□□□□□ -0.35
LINC01116-201ENST00000295549 Q5XG85 94 aa12.87□□□□□ -0.35
LINC01116-201ENST00000295549 Q6Q795 121 aa12.85□□□□□ -0.35
LINC01116-201ENST00000295549 A0A1B0GV72 72 aa12.84□□□□□ -0.35
LINC01116-201ENST00000295549 H3BT86 120 aa12.84□□□□□ -0.35
LINC01116-201ENST00000295549 K7EP34 96 aa12.84□□□□□ -0.35
LINC01116-201ENST00000295549 RBM3P98179 157 aaKnown RBP12.84□□□□□ -0.35
LINC01116-201ENST00000295549 TEN1Q86WV5 123 aa12.83□□□□□ -0.36
LINC01116-201ENST00000295549 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.36
LINC01116-201ENST00000295549 TRBV7-7A0A0K0K1E9 115 aa12.82□□□□□ -0.36
LINC01116-201ENST00000295549 TRBV7-4A0A0J9YYF1 115 aa12.8□□□□□ -0.36
LINC01116-201ENST00000295549 JMJD7-PLA2G4BH0Y9G9 81 aa12.8□□□□□ -0.36
LINC01116-201ENST00000295549 PRR4Q16378 134 aa12.79□□□□□ -0.36
LINC01116-201ENST00000295549 DSCR8Q96T75 97 aa12.79□□□□□ -0.36
LINC01116-201ENST00000295549 MTURNQ8N3F0 131 aa12.79□□□□□ -0.36
LINC01116-201ENST00000295549 A0A1W2PNM2 257 aa12.78□□□□□ -0.36
LINC01116-201ENST00000295549 GTF2H5Q6ZYL4 71 aa12.78□□□□□ -0.36
LINC01116-201ENST00000295549 FP248Q71RG6 208 aaPredicted RBP12.77□□□□□ -0.37
LINC01116-201ENST00000295549 OBSCN-AS1Q96MR7 158 aa12.76□□□□□ -0.37
LINC01116-201ENST00000295549 CCKP06307 115 aa12.73□□□□□ -0.37
LINC01116-201ENST00000295549 ASB16-AS1Q495Z4 193 aa12.72□□□□□ -0.37
LINC01116-201ENST00000295549 PRO0461Q9UI25 63 aa12.72□□□□□ -0.37
LINC01116-201ENST00000295549 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.37
LINC01116-201ENST00000295549 IGLV7-46A0A075B6I9 117 aa12.71□□□□□ -0.38
LINC01116-201ENST00000295549 LOC110117498A0A087WWA1 95 aa12.71□□□□□ -0.38
LINC01116-201ENST00000295549 PDE6GP18545 87 aa12.71□□□□□ -0.38
LINC01116-201ENST00000295549 A0A087WSZ3 146 aa12.7□□□□□ -0.38
LINC01116-201ENST00000295549 C1orf195Q5TG92 126 aa12.7□□□□□ -0.38
LINC01116-201ENST00000295549 SS18L2Q9UHA2 77 aa12.7□□□□□ -0.38
LINC01116-201ENST00000295549 Q6ZQT0 140 aa12.68□□□□□ -0.38
LINC01116-201ENST00000295549 C14orf132Q9NPU4 83 aa12.68□□□□□ -0.38
LINC01116-201ENST00000295549 VPS25Q9BRG1 176 aa12.65□□□□□ -0.38
LINC01116-201ENST00000295549 F8W1H4 67 aa12.64□□□□□ -0.39
LINC01116-201ENST00000295549 C21orf62-AS1Q17RA5 79 aa12.63□□□□□ -0.39
LINC01116-201ENST00000295549 LPAP08519 4548 aa12.63□□□□□ -0.39
LINC01116-201ENST00000295549 TPRXLQ17RH7 258 aa12.62□□□□□ -0.39
LINC01116-201ENST00000295549 LRP2P98164 4655 aa12.62□□□□□ -0.39
LINC01116-201ENST00000295549 A0A1B0GW54 56 aa12.61□□□□□ -0.39
LINC01116-201ENST00000295549 KRTAP13-3Q3SY46 172 aa12.56□□□□□ -0.4
LINC01116-201ENST00000295549 A0A1B0GV90 55 aa12.54□□□□□ -0.4
LINC01116-201ENST00000295549 Q96NJ1 140 aa12.54□□□□□ -0.4
LINC01116-201ENST00000295549 LINC00472Q9H8W2 130 aa12.5□□□□□ -0.41
LINC01116-201ENST00000295549 ETDBQ3ZM63 59 aa12.49□□□□□ -0.41
LINC01116-201ENST00000295549 CDIP1Q9H305 208 aa12.49□□□□□ -0.41
LINC01116-201ENST00000295549 UBR4Q5T4S7 5183 aa12.45□□□□□ -0.42
LINC01116-201ENST00000295549 IGKV4-1P06312 121 aa12.42□□□□□ -0.42
LINC01116-201ENST00000295549 C9orf92A6NGG3 77 aa12.4□□□□□ -0.42
LINC01116-201ENST00000295549 DEFB116Q30KQ4 102 aa12.4□□□□□ -0.42
LINC01116-201ENST00000295549 SIGMAR1Q99720 223 aa12.39□□□□□ -0.43
LINC01116-201ENST00000295549 NREPQ16612 68 aa12.38□□□□□ -0.43
LINC01116-201ENST00000295549 J3KT08 172 aa12.37□□□□□ -0.43
LINC01116-201ENST00000295549 XP32Q5T750 250 aa12.36□□□□□ -0.43
LINC01116-201ENST00000295549 LINC00846Q9NV44 126 aa12.28□□□□□ -0.44
LINC01116-201ENST00000295549 Q6ZVQ6 151 aa12.27□□□□□ -0.45
LINC01116-201ENST00000295549 A0A1B0GVX0 72 aa12.26□□□□□ -0.45
LINC01116-201ENST00000295549 MUC17Q685J3 4493 aa12.25□□□□□ -0.45
LINC01116-201ENST00000295549 NDUFB1O75438 58 aa12.25□□□□□ -0.45
LINC01116-201ENST00000295549 IGHV6-1A0A0B4J1U7 121 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms