RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CFAP54Q96N23 3096 aa11.09□□□□□ -0.63
CDC42EP3-201ENST00000295324 IGLV7-46A0A075B6I9 117 aa11.09□□□□□ -0.63
CDC42EP3-201ENST00000295324 H7BZZ5 65 aa11.08□□□□□ -0.64
CDC42EP3-201ENST00000295324 UBR5O95071 2799 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-201ENST00000295324 Q6ZSA8 131 aa11.04□□□□□ -0.64
CDC42EP3-201ENST00000295324 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
CDC42EP3-201ENST00000295324 TRIOO75962 3097 aa11.01□□□□□ -0.65
CDC42EP3-201ENST00000295324 KRTAP1-5Q9BYS1 174 aa11.01□□□□□ -0.65
CDC42EP3-201ENST00000295324 CDC42SE1Q9NRR8 79 aa10.98□□□□□ -0.65
CDC42EP3-201ENST00000295324 SPRR1AP35321 89 aa10.95□□□□□ -0.66
CDC42EP3-201ENST00000295324 LAMA2P24043 3122 aaKnown RBP10.95□□□□□ -0.66
CDC42EP3-201ENST00000295324 SPANXA2-OT1Q8N9U9 137 aa10.92□□□□□ -0.66
CDC42EP3-201ENST00000295324 ITPR2Q14571 2701 aa10.91□□□□□ -0.66
CDC42EP3-201ENST00000295324 Q5VSD8 79 aa10.91□□□□□ -0.66
CDC42EP3-201ENST00000295324 FLNCQ14315 2725 aa10.9□□□□□ -0.66
CDC42EP3-201ENST00000295324 A0A0D9SG42 100 aa10.9□□□□□ -0.66
CDC42EP3-201ENST00000295324 KRTAP26-1Q6PEX3 210 aa10.88□□□□□ -0.67
CDC42EP3-201ENST00000295324 Q8N1X5 172 aa10.88□□□□□ -0.67
CDC42EP3-201ENST00000295324 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
CDC42EP3-201ENST00000295324 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
CDC42EP3-201ENST00000295324 LINC01554Q52M75 96 aa10.86□□□□□ -0.67
CDC42EP3-201ENST00000295324 SPRR1BP22528 89 aa10.85□□□□□ -0.67
CDC42EP3-201ENST00000295324 KRTAP10-2P60368 255 aa10.85□□□□□ -0.67
CDC42EP3-201ENST00000295324 Q8NDZ9 215 aa10.84□□□□□ -0.67
CDC42EP3-201ENST00000295324 UNC80Q8N2C7 3258 aa10.84□□□□□ -0.67
CDC42EP3-201ENST00000295324 ITPR1Q14643 2758 aa10.84□□□□□ -0.67
CDC42EP3-201ENST00000295324 XIRP2A4UGR9 3374 aa10.83□□□□□ -0.68
CDC42EP3-201ENST00000295324 LUZP6Q538Z0 58 aa10.83□□□□□ -0.68
CDC42EP3-201ENST00000295324 M0R2T5 61 aa10.82□□□□□ -0.68
CDC42EP3-201ENST00000295324 Q6ZR54 194 aa10.82□□□□□ -0.68
CDC42EP3-201ENST00000295324 KRTAP21-3Q3LHN1 58 aa10.81□□□□□ -0.68
CDC42EP3-201ENST00000295324 VPS13AQ96RL7 3174 aa10.79□□□□□ -0.68
CDC42EP3-201ENST00000295324 NBEAL2Q6ZNJ1 2754 aa10.77□□□□□ -0.68
CDC42EP3-201ENST00000295324 Q1T7F1 81 aa10.76□□□□□ -0.69
CDC42EP3-201ENST00000295324 STAB2Q8WWQ8 2551 aa10.75□□□□□ -0.69
CDC42EP3-201ENST00000295324 FRYQ5TBA9 3013 aa10.75□□□□□ -0.69
CDC42EP3-201ENST00000295324 SEC61BP60468 96 aaKnown RBP10.72□□□□□ -0.69
CDC42EP3-201ENST00000295324 ZCCHC13Q8WW36 166 aaKnown RBP10.72□□□□□ -0.69
CDC42EP3-201ENST00000295324 HIVEP1P15822 2718 aa10.71□□□□□ -0.69
CDC42EP3-201ENST00000295324 OCR1Q9BZK8 76 aa10.71□□□□□ -0.7
CDC42EP3-201ENST00000295324 MMP24-AS1A0A0U1RRL7 71 aa10.67□□□□□ -0.7
CDC42EP3-201ENST00000295324 CDH23Q9H251 3354 aa10.66□□□□□ -0.7
CDC42EP3-201ENST00000295324 FRYLO94915 3013 aa10.65□□□□□ -0.7
CDC42EP3-201ENST00000295324 TACC2O95359 2948 aa10.65□□□□□ -0.7
CDC42EP3-201ENST00000295324 ATMQ13315 3056 aa10.64□□□□□ -0.71
CDC42EP3-201ENST00000295324 LINC00472Q9H8W2 130 aa10.63□□□□□ -0.71
CDC42EP3-201ENST00000295324 HRES1P13985 223 aa10.62□□□□□ -0.71
CDC42EP3-201ENST00000295324 Q75L30 129 aa10.62□□□□□ -0.71
CDC42EP3-201ENST00000295324 A0A1B0GU33 70 aa10.62□□□□□ -0.71
CDC42EP3-201ENST00000295324 COL12A1Q99715 3063 aa10.62□□□□□ -0.71
CDC42EP3-201ENST00000295324 KMT2BQ9UMN6 2715 aaPredicted RBP10.61□□□□□ -0.71
CDC42EP3-201ENST00000295324 PANO1I0J062 215 aa10.61□□□□□ -0.71
CDC42EP3-201ENST00000295324 CSAG1Q6PB30 78 aa10.59□□□□□ -0.71
CDC42EP3-201ENST00000295324 LINC00483Q53H64 154 aa10.59□□□□□ -0.71
CDC42EP3-201ENST00000295324 TENM4Q6N022 2769 aa10.58□□□□□ -0.72
CDC42EP3-201ENST00000295324 FP248Q71RG6 208 aaPredicted RBP10.57□□□□□ -0.72
CDC42EP3-201ENST00000295324 CAMK2N1Q7Z7J9 78 aa10.57□□□□□ -0.72
CDC42EP3-201ENST00000295324 REV3LO60673 3130 aa10.56□□□□□ -0.72
CDC42EP3-201ENST00000295324 OXTP01178 125 aa10.55□□□□□ -0.72
CDC42EP3-201ENST00000295324 FLG2Q5D862 2391 aaPredicted RBP10.55□□□□□ -0.72
CDC42EP3-201ENST00000295324 H3BS24 57 aa10.55□□□□□ -0.72
CDC42EP3-201ENST00000295324 SPINK7P58062 85 aa10.55□□□□□ -0.72
CDC42EP3-201ENST00000295324 UTP20O75691 2785 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-201ENST00000295324 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
CDC42EP3-201ENST00000295324 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP3-201ENST00000295324 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP3-201ENST00000295324 LINC01558Q9Y6Z2 57 aa10.51□□□□□ -0.73
CDC42EP3-201ENST00000295324 Q5XG85 94 aa10.51□□□□□ -0.73
CDC42EP3-201ENST00000295324 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
CDC42EP3-201ENST00000295324 S4R3F8 94 aa10.5□□□□□ -0.73
CDC42EP3-201ENST00000295324 Q5W150 140 aa10.5□□□□□ -0.73
CDC42EP3-201ENST00000295324 SZT2Q5T011 3432 aa10.49□□□□□ -0.73
CDC42EP3-201ENST00000295324 DMXL2Q8TDJ6 3036 aa10.49□□□□□ -0.73
CDC42EP3-201ENST00000295324 PRAC1Q96KF2 57 aa10.48□□□□□ -0.73
CDC42EP3-201ENST00000295324 APCP25054 2843 aa10.48□□□□□ -0.73
CDC42EP3-201ENST00000295324 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
CDC42EP3-201ENST00000295324 DMAC1Q96GE9 116 aa10.43□□□□□ -0.74
CDC42EP3-201ENST00000295324 A0A087X002 238 aa10.42□□□□□ -0.74
CDC42EP3-201ENST00000295324 TNRC18O15417 2968 aaPredicted RBP10.42□□□□□ -0.74
CDC42EP3-201ENST00000295324 NIPBLQ6KC79 2804 aaeCLIP10.41□□□□□ -0.74
CDC42EP3-201ENST00000295324 A0A0A0MQY5 61 aa10.41□□□□□ -0.74
CDC42EP3-201ENST00000295324 LAMA1P25391 3075 aa10.37□□□□□ -0.75
CDC42EP3-201ENST00000295324 Q5VV11 94 aa10.37□□□□□ -0.75
CDC42EP3-201ENST00000295324 ADGRG4Q8IZF6 3080 aa10.35□□□□□ -0.75
CDC42EP3-201ENST00000295324 COL6A3P12111 3177 aa10.34□□□□□ -0.75
CDC42EP3-201ENST00000295324 CELSR3Q9NYQ7 3312 aa10.34□□□□□ -0.75
CDC42EP3-201ENST00000295324 LRBAP50851 2863 aa10.33□□□□□ -0.75
CDC42EP3-201ENST00000295324 EYSQ5T1H1 3165 aa10.33□□□□□ -0.76
CDC42EP3-201ENST00000295324 BOD1L1Q8NFC6 3051 aa10.32□□□□□ -0.76
CDC42EP3-201ENST00000295324 KALRNO60229 2985 aa10.32□□□□□ -0.76
CDC42EP3-201ENST00000295324 ZZEF1O43149 2961 aa10.32□□□□□ -0.76
CDC42EP3-201ENST00000295324 R4GN34 69 aa10.32□□□□□ -0.76
CDC42EP3-201ENST00000295324 NBEAQ8NFP9 2946 aa10.31□□□□□ -0.76
CDC42EP3-201ENST00000295324 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
CDC42EP3-201ENST00000295324 KRTAP11-1Q8IUC1 163 aa10.27□□□□□ -0.77
CDC42EP3-201ENST00000295324 CRYBG3Q68DQ2 2970 aa10.25□□□□□ -0.77
CDC42EP3-201ENST00000295324 VCANP13611 3396 aa10.25□□□□□ -0.77
CDC42EP3-201ENST00000295324 ASB16-AS1Q495Z4 193 aa10.24□□□□□ -0.77
CDC42EP3-201ENST00000295324 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
CDC42EP3-201ENST00000295324 CELSR2Q9HCU4 2923 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms