RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 FSIP2Q5CZC0 6907 aa13.46□□□□□ -0.25
U2AF1-201ENST00000291552 Q6ZQY7 126 aa13.44□□□□□ -0.26
U2AF1-201ENST00000291552 TCL1BO95988 128 aa13.42□□□□□ -0.26
U2AF1-201ENST00000291552 F8WEM9 126 aa13.41□□□□□ -0.26
U2AF1-201ENST00000291552 VAMP3Q15836 100 aa13.41□□□□□ -0.26
U2AF1-201ENST00000291552 hADV29S1A0JD25 119 aa13.39□□□□□ -0.27
U2AF1-201ENST00000291552 IGFL1Q6UW32 110 aa13.38□□□□□ -0.27
U2AF1-201ENST00000291552 S100A2P29034 98 aa13.37□□□□□ -0.27
U2AF1-201ENST00000291552 HSBP1L1C9JCN9 74 aa13.36□□□□□ -0.27
U2AF1-201ENST00000291552 CLEC2BQ92478 149 aa13.36□□□□□ -0.27
U2AF1-201ENST00000291552 TRBV7-7A0A0K0K1E9 115 aa13.35□□□□□ -0.27
U2AF1-201ENST00000291552 CFC1BP0CG36 223 aa13.35□□□□□ -0.27
U2AF1-201ENST00000291552 LORP23490 312 aaPredicted RBP13.35□□□□□ -0.27
U2AF1-201ENST00000291552 Q6JHZ5 121 aa13.35□□□□□ -0.27
U2AF1-201ENST00000291552 C12orf57Q99622 126 aa13.35□□□□□ -0.27
U2AF1-201ENST00000291552 CRCT1Q9UGL9 99 aa13.34□□□□□ -0.27
U2AF1-201ENST00000291552 KRTAP10-6P60371 365 aaPredicted RBP13.32□□□□□ -0.28
U2AF1-201ENST00000291552 OCIAD2Q56VL3 154 aa13.32□□□□□ -0.28
U2AF1-201ENST00000291552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.31□□□□□ -0.28
U2AF1-201ENST00000291552 HIST1H4GQ99525 98 aa13.26□□□□□ -0.29
U2AF1-201ENST00000291552 H3BUT2 72 aa13.24□□□□□ -0.29
U2AF1-201ENST00000291552 COX8AP10176 69 aa13.24□□□□□ -0.29
U2AF1-201ENST00000291552 BVES-AS1Q5T3Y7 98 aa13.24□□□□□ -0.29
U2AF1-201ENST00000291552 PPDPFLQ8WWR9 84 aa13.24□□□□□ -0.29
U2AF1-201ENST00000291552 S100A6P06703 90 aa13.22□□□□□ -0.29
U2AF1-201ENST00000291552 COX6B2Q6YFQ2 88 aa13.22□□□□□ -0.29
U2AF1-201ENST00000291552 OBSCN-AS1Q96MR7 158 aa13.22□□□□□ -0.29
U2AF1-201ENST00000291552 SCGB1D1O95968 90 aa13.21□□□□□ -0.29
U2AF1-201ENST00000291552 SNHG12Q9BXW3 62 aa13.19□□□□□ -0.3
U2AF1-201ENST00000291552 M0R2T5 61 aa13.18□□□□□ -0.3
U2AF1-201ENST00000291552 CFC1P0CG37 223 aa13.18□□□□□ -0.3
U2AF1-201ENST00000291552 Q75L30 129 aa13.18□□□□□ -0.3
U2AF1-201ENST00000291552 DLEU1O43261 78 aa13.17□□□□□ -0.3
U2AF1-201ENST00000291552 FAM218AQ96MZ4 157 aa13.14□□□□□ -0.31
U2AF1-201ENST00000291552 LST1O00453 97 aa13.13□□□□□ -0.31
U2AF1-201ENST00000291552 S100A1P23297 94 aa13.13□□□□□ -0.31
U2AF1-201ENST00000291552 C14orf144Q96I85 54 aa13.12□□□□□ -0.31
U2AF1-201ENST00000291552 Q6Q795 121 aa13.11□□□□□ -0.31
U2AF1-201ENST00000291552 ATP11AUNQ6ZP68 121 aa13.09□□□□□ -0.31
U2AF1-201ENST00000291552 RAB37Q96AX2 223 aa13.09□□□□□ -0.31
U2AF1-201ENST00000291552 A0A0B4J2C4 111 aa13.08□□□□□ -0.32
U2AF1-201ENST00000291552 C2orf91Q6ZV80 131 aa13.08□□□□□ -0.32
U2AF1-201ENST00000291552 HIGD1BQ9P298 99 aa13.08□□□□□ -0.32
U2AF1-201ENST00000291552 NDUFV3P56181 108 aaKnown RBP13.06□□□□□ -0.32
U2AF1-201ENST00000291552 Q96NJ1 140 aa13.06□□□□□ -0.32
U2AF1-201ENST00000291552 H0YGX0 51 aa13.05□□□□□ -0.32
U2AF1-201ENST00000291552 SS18L2Q9UHA2 77 aa13.05□□□□□ -0.32
U2AF1-201ENST00000291552 PAM16Q9Y3D7 125 aa13.05□□□□□ -0.32
U2AF1-201ENST00000291552 SPATA45Q537H7 98 aa13.04□□□□□ -0.32
U2AF1-201ENST00000291552 TEN1Q86WV5 123 aa13.03□□□□□ -0.32
U2AF1-201ENST00000291552 C20orf166-AS1Q96NR2 134 aa13.02□□□□□ -0.33
U2AF1-201ENST00000291552 A0A087WSZ3 146 aa13□□□□□ -0.33
U2AF1-201ENST00000291552 A8MUU9 505 aa12.99□□□□□ -0.33
U2AF1-201ENST00000291552 SNCGO76070 127 aa12.97□□□□□ -0.33
U2AF1-201ENST00000291552 H3BMG7 143 aa12.96□□□□□ -0.33
U2AF1-201ENST00000291552 CEND1Q8N111 149 aa12.96□□□□□ -0.33
U2AF1-201ENST00000291552 VAMP8Q9BV40 100 aa12.96□□□□□ -0.33
U2AF1-201ENST00000291552 A0A1B0GX51 115 aa12.94□□□□□ -0.34
U2AF1-201ENST00000291552 A0A1W2PNM2 257 aa12.94□□□□□ -0.34
U2AF1-201ENST00000291552 FXYD2P54710 66 aa12.94□□□□□ -0.34
U2AF1-201ENST00000291552 PRO1854Q9UHT4 67 aa12.94□□□□□ -0.34
U2AF1-201ENST00000291552 GHRHP01286 108 aa12.92□□□□□ -0.34
U2AF1-201ENST00000291552 FABP2P12104 132 aa12.92□□□□□ -0.34
U2AF1-201ENST00000291552 TRIAP1O43715 76 aa12.91□□□□□ -0.34
U2AF1-201ENST00000291552 DSCR10P59022 87 aa12.91□□□□□ -0.34
U2AF1-201ENST00000291552 TMEM238LA0A1B0GVL6 79 aa12.87□□□□□ -0.35
U2AF1-201ENST00000291552 SIGMAR1Q99720 223 aa12.85□□□□□ -0.35
U2AF1-201ENST00000291552 USH2AO75445 5202 aa12.83□□□□□ -0.36
U2AF1-201ENST00000291552 KRTAP16-1A8MUX0 517 aa12.83□□□□□ -0.36
U2AF1-201ENST00000291552 A0A1B0GV72 72 aa12.8□□□□□ -0.36
U2AF1-201ENST00000291552 KRTAP9-8Q9BYQ0 159 aa12.8□□□□□ -0.36
U2AF1-201ENST00000291552 K7ERJ3 54 aa12.79□□□□□ -0.36
U2AF1-201ENST00000291552 TRBV7-4A0A0J9YYF1 115 aa12.77□□□□□ -0.37
U2AF1-201ENST00000291552 ANKRD29Q8N6D5 301 aa12.77□□□□□ -0.37
U2AF1-201ENST00000291552 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
U2AF1-201ENST00000291552 NOTCH2NLQ7Z3S9 236 aa12.76□□□□□ -0.37
U2AF1-201ENST00000291552 ORMDL1Q9P0S3 153 aa12.76□□□□□ -0.37
U2AF1-201ENST00000291552 SSPOA2VEC9 5147 aa12.76□□□□□ -0.37
U2AF1-201ENST00000291552 LINC00313P59037 77 aa12.75□□□□□ -0.37
U2AF1-201ENST00000291552 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
U2AF1-201ENST00000291552 DNAL4O96015 105 aa12.73□□□□□ -0.37
U2AF1-201ENST00000291552 HSD52Q0P140 79 aa12.73□□□□□ -0.37
U2AF1-201ENST00000291552 DEFB116Q30KQ4 102 aa12.71□□□□□ -0.37
U2AF1-201ENST00000291552 PYY3Q5JQD4 70 aa12.71□□□□□ -0.37
U2AF1-201ENST00000291552 LINC00472Q9H8W2 130 aa12.71□□□□□ -0.37
U2AF1-201ENST00000291552 PSMB2P49721 201 aa12.7□□□□□ -0.38
U2AF1-201ENST00000291552 H3BQ85 93 aa12.67□□□□□ -0.38
U2AF1-201ENST00000291552 CCKP06307 115 aa12.67□□□□□ -0.38
U2AF1-201ENST00000291552 MPLKIPQ8TAP9 179 aa12.67□□□□□ -0.38
U2AF1-201ENST00000291552 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
U2AF1-201ENST00000291552 HRES1P13985 223 aa12.65□□□□□ -0.38
U2AF1-201ENST00000291552 TRACP01848 142 aa12.63□□□□□ -0.39
U2AF1-201ENST00000291552 IGHV6-1A0A0B4J1U7 121 aa12.62□□□□□ -0.39
U2AF1-201ENST00000291552 MT2AP02795 61 aa12.61□□□□□ -0.39
U2AF1-201ENST00000291552 COX6CP09669 75 aa12.61□□□□□ -0.39
U2AF1-201ENST00000291552 UBE2V1Q13404 147 aa12.61□□□□□ -0.39
U2AF1-201ENST00000291552 FAM236DA0A1B0GTK5 79 aa12.59□□□□□ -0.39
U2AF1-201ENST00000291552 FAM236CP0DP71 79 aa12.59□□□□□ -0.39
U2AF1-201ENST00000291552 A0A1B0GVX0 72 aa12.53□□□□□ -0.4
U2AF1-201ENST00000291552 VPS25Q9BRG1 176 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms