RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 TNP2Q05952 138 aa9.56□□□□□ -0.88
MSI2-201ENST00000284073 HECTD1Q9ULT8 2610 aa9.55□□□□□ -0.88
MSI2-201ENST00000284073 A6NN06 94 aa9.55□□□□□ -0.88
MSI2-201ENST00000284073 SPRR1BP22528 89 aa9.55□□□□□ -0.88
MSI2-201ENST00000284073 KRTAP1-3Q8IUG1 177 aa9.54□□□□□ -0.88
MSI2-201ENST00000284073 CHD6Q8TD26 2715 aa9.54□□□□□ -0.88
MSI2-201ENST00000284073 FLNAP21333 2647 aaKnown RBP9.54□□□□□ -0.88
MSI2-201ENST00000284073 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
MSI2-201ENST00000284073 A8MU10 97 aa9.53□□□□□ -0.88
MSI2-201ENST00000284073 S4R3F8 94 aa9.52□□□□□ -0.89
MSI2-201ENST00000284073 Q6ZSA8 131 aa9.52□□□□□ -0.89
MSI2-201ENST00000284073 LAMA2P24043 3122 aaKnown RBP9.51□□□□□ -0.89
MSI2-201ENST00000284073 SPATA8Q6RVD6 105 aa9.51□□□□□ -0.89
MSI2-201ENST00000284073 ADM2Q7Z4H4 148 aa9.51□□□□□ -0.89
MSI2-201ENST00000284073 MAST4O15021 2626 aa9.51□□□□□ -0.89
MSI2-201ENST00000284073 H1FX-AS1Q4G0G2 97 aa9.49□□□□□ -0.89
MSI2-201ENST00000284073 KRTAP1-1Q07627 177 aa9.49□□□□□ -0.89
MSI2-201ENST00000284073 FLNBO75369 2602 aaKnown RBP9.49□□□□□ -0.89
MSI2-201ENST00000284073 KRTAP29-1A8MX34 341 aaPredicted RBP9.49□□□□□ -0.89
MSI2-201ENST00000284073 ASB16-AS1Q495Z4 193 aa9.48□□□□□ -0.89
MSI2-201ENST00000284073 FREM2Q5SZK8 3169 aa9.47□□□□□ -0.89
MSI2-201ENST00000284073 Q6ZR54 194 aa9.47□□□□□ -0.89
MSI2-201ENST00000284073 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
MSI2-201ENST00000284073 ITPR3Q14573 2671 aa9.45□□□□□ -0.9
MSI2-201ENST00000284073 PLAC8Q9NZF1 115 aa9.43□□□□□ -0.9
MSI2-201ENST00000284073 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
MSI2-201ENST00000284073 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
MSI2-201ENST00000284073 CHD7Q9P2D1 2997 aa9.42□□□□□ -0.9
MSI2-201ENST00000284073 CENPEQ02224 2701 aa9.4□□□□□ -0.9
MSI2-201ENST00000284073 R4GN34 69 aa9.4□□□□□ -0.9
MSI2-201ENST00000284073 UNC79Q9P2D8 2635 aa9.38□□□□□ -0.91
MSI2-201ENST00000284073 KRTAP25-1Q3LHN0 102 aa9.37□□□□□ -0.91
MSI2-201ENST00000284073 GCN1Q92616 2671 aaKnown RBP9.36□□□□□ -0.91
MSI2-201ENST00000284073 KRTAP4-16G5E9R7 235 aaPredicted RBP9.36□□□□□ -0.91
MSI2-201ENST00000284073 KRTAP1-5Q9BYS1 174 aa9.36□□□□□ -0.91
MSI2-201ENST00000284073 A0A087X002 238 aa9.35□□□□□ -0.91
MSI2-201ENST00000284073 NOTCH2NLQ7Z3S9 236 aa9.35□□□□□ -0.91
MSI2-201ENST00000284073 NOTCH1P46531 2555 aa9.32□□□□□ -0.92
MSI2-201ENST00000284073 NDUFAF8A1L188 74 aa9.3□□□□□ -0.92
MSI2-201ENST00000284073 NBEAL2Q6ZNJ1 2754 aa9.27□□□□□ -0.93
MSI2-201ENST00000284073 M0QZ58 72 aa9.27□□□□□ -0.93
MSI2-201ENST00000284073 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
MSI2-201ENST00000284073 LCE6AA0A183 80 aa9.26□□□□□ -0.93
MSI2-201ENST00000284073 MGAQ8IWI9 3026 aa9.24□□□□□ -0.93
MSI2-201ENST00000284073 PANO1I0J062 215 aa9.23□□□□□ -0.93
MSI2-201ENST00000284073 TRIOO75962 3097 aa9.23□□□□□ -0.93
MSI2-201ENST00000284073 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.93
MSI2-201ENST00000284073 M0R2T5 61 aa9.2□□□□□ -0.94
MSI2-201ENST00000284073 CFAP46Q8IYW2 2715 aa9.18□□□□□ -0.94
MSI2-201ENST00000284073 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
MSI2-201ENST00000284073 STAB2Q8WWQ8 2551 aa9.16□□□□□ -0.94
MSI2-201ENST00000284073 MAP1AP78559 2803 aaPredicted RBP9.15□□□□□ -0.94
MSI2-201ENST00000284073 FRYQ5TBA9 3013 aa9.14□□□□□ -0.95
MSI2-201ENST00000284073 COL6A5A8TX70 2615 aa9.13□□□□□ -0.95
MSI2-201ENST00000284073 WDFY4Q6ZS81 3184 aa9.13□□□□□ -0.95
MSI2-201ENST00000284073 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
MSI2-201ENST00000284073 HELZ2Q9BYK8 2649 aaKnown RBP9.11□□□□□ -0.95
MSI2-201ENST00000284073 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
MSI2-201ENST00000284073 CHD9Q3L8U1 2897 aa9.09□□□□□ -0.95
MSI2-201ENST00000284073 VPS13AQ96RL7 3174 aa9.08□□□□□ -0.96
MSI2-201ENST00000284073 KRTAP10-1P60331 282 aa9.07□□□□□ -0.96
MSI2-201ENST00000284073 KRTAP10-2P60368 255 aa9.07□□□□□ -0.96
MSI2-201ENST00000284073 LAMA3Q16787 3333 aa9.04□□□□□ -0.96
MSI2-201ENST00000284073 KRTAP7-1Q8IUC3 87 aa9.04□□□□□ -0.96
MSI2-201ENST00000284073 A8MUU9 505 aa9.04□□□□□ -0.96
MSI2-201ENST00000284073 PLAC4Q8WY50 150 aa9.04□□□□□ -0.96
MSI2-201ENST00000284073 CELSR3Q9NYQ7 3312 aa9.04□□□□□ -0.96
MSI2-201ENST00000284073 TRANK1O15050 2925 aa9.03□□□□□ -0.96
MSI2-201ENST00000284073 XIRP2A4UGR9 3374 aa9.02□□□□□ -0.97
MSI2-201ENST00000284073 KALRNO60229 2985 aa9.02□□□□□ -0.97
MSI2-201ENST00000284073 BRCA2P51587 3418 aa9.01□□□□□ -0.97
MSI2-201ENST00000284073 TEP1Q99973 2627 aaKnown RBP9.01□□□□□ -0.97
MSI2-201ENST00000284073 BAHCC1Q9P281 2608 aa9□□□□□ -0.97
MSI2-201ENST00000284073 PRUNE2Q8WUY3 3088 aa9□□□□□ -0.97
MSI2-201ENST00000284073 HTTP42858 3142 aa9□□□□□ -0.97
MSI2-201ENST00000284073 UNC80Q8N2C7 3258 aa8.98□□□□□ -0.97
MSI2-201ENST00000284073 C20orf166-AS1Q96NR2 134 aa8.97□□□□□ -0.97
MSI2-201ENST00000284073 NBEAQ8NFP9 2946 aa8.96□□□□□ -0.98
MSI2-201ENST00000284073 ITPR1Q14643 2758 aa8.95□□□□□ -0.98
MSI2-201ENST00000284073 DSPP15924 2871 aaKnown RBP8.94□□□□□ -0.98
MSI2-201ENST00000284073 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
MSI2-201ENST00000284073 ASH1LQ9NR48 2969 aaKnown RBP8.91□□□□□ -0.98
MSI2-201ENST00000284073 NSD1Q96L73 2696 aaPredicted RBP8.89□□□□□ -0.99
MSI2-201ENST00000284073 Q5VSD8 79 aa8.86□□□□□ -0.99
MSI2-201ENST00000284073 UBR5O95071 2799 aaPredicted RBP8.86□□□□□ -0.99
MSI2-201ENST00000284073 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
MSI2-201ENST00000284073 SETXQ7Z333 2677 aaKnown RBP8.85□□□□□ -0.99
MSI2-201ENST00000284073 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
MSI2-201ENST00000284073 ZNF292O60281 2723 aa8.8□□□□□ -1
MSI2-201ENST00000284073 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
MSI2-201ENST00000284073 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
MSI2-201ENST00000284073 APCP25054 2843 aa8.77□□□□□ -1.01
MSI2-201ENST00000284073 DNAH14Q0VDD8 3507 aa8.75□□□□□ -1.01
MSI2-201ENST00000284073 REV3LO60673 3130 aa8.73□□□□□ -1.01
MSI2-201ENST00000284073 LRBAP50851 2863 aa8.72□□□□□ -1.01
MSI2-201ENST00000284073 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
MSI2-201ENST00000284073 VCANP13611 3396 aa8.68□□□□□ -1.02
MSI2-201ENST00000284073 TACC2O95359 2948 aa8.68□□□□□ -1.02
MSI2-201ENST00000284073 H0YAA0 97 aa8.67□□□□□ -1.02
MSI2-201ENST00000284073 CDH23Q9H251 3354 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms