RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
CNTNAP1-201ENST00000264638 PRAC1Q96KF2 57 aa8.35□□□□□ -1.07
CNTNAP1-201ENST00000264638 LAMA2P24043 3122 aaKnown RBP8.33□□□□□ -1.08
CNTNAP1-201ENST00000264638 LAMA3Q16787 3333 aa8.32□□□□□ -1.08
CNTNAP1-201ENST00000264638 STAB1Q9NY15 2570 aa8.32□□□□□ -1.08
CNTNAP1-201ENST00000264638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
CNTNAP1-201ENST00000264638 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
CNTNAP1-201ENST00000264638 MMP24-AS1A0A0U1RRL7 71 aa8.28□□□□□ -1.08
CNTNAP1-201ENST00000264638 TRANK1O15050 2925 aa8.28□□□□□ -1.08
CNTNAP1-201ENST00000264638 PLAC8Q9NZF1 115 aa8.27□□□□□ -1.08
CNTNAP1-201ENST00000264638 TEP1Q99973 2627 aaKnown RBP8.27□□□□□ -1.09
CNTNAP1-201ENST00000264638 CAMK2N1Q7Z7J9 78 aa8.24□□□□□ -1.09
CNTNAP1-201ENST00000264638 SETXQ7Z333 2677 aaKnown RBP8.23□□□□□ -1.09
CNTNAP1-201ENST00000264638 SPINK7P58062 85 aa8.23□□□□□ -1.09
CNTNAP1-201ENST00000264638 ASB16-AS1Q495Z4 193 aa8.22□□□□□ -1.09
CNTNAP1-201ENST00000264638 TEX15Q9BXT5 2789 aa8.22□□□□□ -1.09
CNTNAP1-201ENST00000264638 COL6A5A8TX70 2615 aa8.21□□□□□ -1.1
CNTNAP1-201ENST00000264638 SPRR1AP35321 89 aa8.2□□□□□ -1.1
CNTNAP1-201ENST00000264638 UNC79Q9P2D8 2635 aa8.19□□□□□ -1.1
CNTNAP1-201ENST00000264638 AKAP13Q12802 2813 aa8.19□□□□□ -1.1
CNTNAP1-201ENST00000264638 UNC80Q8N2C7 3258 aa8.18□□□□□ -1.1
CNTNAP1-201ENST00000264638 MGAQ8IWI9 3026 aa8.18□□□□□ -1.1
CNTNAP1-201ENST00000264638 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
CNTNAP1-201ENST00000264638 Q6ZSA8 131 aa8.16□□□□□ -1.1
CNTNAP1-201ENST00000264638 CHD6Q8TD26 2715 aa8.16□□□□□ -1.1
CNTNAP1-201ENST00000264638 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
CNTNAP1-201ENST00000264638 Q5W150 140 aa8.14□□□□□ -1.11
CNTNAP1-201ENST00000264638 SPRR1BP22528 89 aa8.14□□□□□ -1.11
CNTNAP1-201ENST00000264638 PRUNE2Q8WUY3 3088 aa8.12□□□□□ -1.11
CNTNAP1-201ENST00000264638 LCE6AA0A183 80 aa8.12□□□□□ -1.11
CNTNAP1-201ENST00000264638 ROMO1P60602 79 aa8.12□□□□□ -1.11
CNTNAP1-201ENST00000264638 KRTAP1-5Q9BYS1 174 aa8.12□□□□□ -1.11
CNTNAP1-201ENST00000264638 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
CNTNAP1-201ENST00000264638 IGSF10Q6WRI0 2623 aa8.1□□□□□ -1.11
CNTNAP1-201ENST00000264638 BAHCC1Q9P281 2608 aa8.1□□□□□ -1.11
CNTNAP1-201ENST00000264638 CDH23Q9H251 3354 aa8.1□□□□□ -1.11
CNTNAP1-201ENST00000264638 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
CNTNAP1-201ENST00000264638 Q8NDZ9 215 aa8.09□□□□□ -1.11
CNTNAP1-201ENST00000264638 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.12
CNTNAP1-201ENST00000264638 S4R3F8 94 aa8.08□□□□□ -1.12
CNTNAP1-201ENST00000264638 NOTCH1P46531 2555 aa8.06□□□□□ -1.12
CNTNAP1-201ENST00000264638 TRIOO75962 3097 aa8.06□□□□□ -1.12
CNTNAP1-201ENST00000264638 DSPP15924 2871 aaKnown RBP8.02□□□□□ -1.13
CNTNAP1-201ENST00000264638 NBEAL1Q6ZS30 2694 aa8.01□□□□□ -1.13
CNTNAP1-201ENST00000264638 KRTAP10-1P60331 282 aa8□□□□□ -1.13
CNTNAP1-201ENST00000264638 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
CNTNAP1-201ENST00000264638 Q5VSD8 79 aa7.98□□□□□ -1.13
CNTNAP1-201ENST00000264638 KRTAP16-1A8MUX0 517 aa7.98□□□□□ -1.13
CNTNAP1-201ENST00000264638 Q6ZR54 194 aa7.98□□□□□ -1.13
CNTNAP1-201ENST00000264638 R4GN34 69 aa7.97□□□□□ -1.13
CNTNAP1-201ENST00000264638 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
CNTNAP1-201ENST00000264638 GCN1Q92616 2671 aaKnown RBP7.97□□□□□ -1.13
CNTNAP1-201ENST00000264638 WDFY4Q6ZS81 3184 aa7.95□□□□□ -1.14
CNTNAP1-201ENST00000264638 CFAP54Q96N23 3096 aa7.95□□□□□ -1.14
CNTNAP1-201ENST00000264638 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
CNTNAP1-201ENST00000264638 SZT2Q5T011 3432 aa7.94□□□□□ -1.14
CNTNAP1-201ENST00000264638 UBR5O95071 2799 aaPredicted RBP7.93□□□□□ -1.14
CNTNAP1-201ENST00000264638 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
CNTNAP1-201ENST00000264638 M0R2T5 61 aa7.92□□□□□ -1.14
CNTNAP1-201ENST00000264638 XIRP2A4UGR9 3374 aa7.91□□□□□ -1.14
CNTNAP1-201ENST00000264638 A6NN06 94 aa7.91□□□□□ -1.14
CNTNAP1-201ENST00000264638 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.14
CNTNAP1-201ENST00000264638 NSD1Q96L73 2696 aaPredicted RBP7.86□□□□□ -1.15
CNTNAP1-201ENST00000264638 KRTAP4-16G5E9R7 235 aaPredicted RBP7.86□□□□□ -1.15
CNTNAP1-201ENST00000264638 KRTAP25-1Q3LHN0 102 aa7.84□□□□□ -1.15
CNTNAP1-201ENST00000264638 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
CNTNAP1-201ENST00000264638 DNAH14Q0VDD8 3507 aa7.84□□□□□ -1.15
CNTNAP1-201ENST00000264638 LAMA1P25391 3075 aa7.84□□□□□ -1.15
CNTNAP1-201ENST00000264638 PANO1I0J062 215 aa7.83□□□□□ -1.16
CNTNAP1-201ENST00000264638 KRTAP21-3Q3LHN1 58 aa7.82□□□□□ -1.16
CNTNAP1-201ENST00000264638 MAP1AP78559 2803 aaPredicted RBP7.82□□□□□ -1.16
CNTNAP1-201ENST00000264638 M0QZ58 72 aa7.81□□□□□ -1.16
CNTNAP1-201ENST00000264638 VPS13AQ96RL7 3174 aa7.8□□□□□ -1.16
CNTNAP1-201ENST00000264638 NBEAL2Q6ZNJ1 2754 aa7.79□□□□□ -1.16
CNTNAP1-201ENST00000264638 VCANP13611 3396 aa7.78□□□□□ -1.16
CNTNAP1-201ENST00000264638 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
CNTNAP1-201ENST00000264638 Q6ZRN7 208 aaPredicted RBP7.76□□□□□ -1.17
CNTNAP1-201ENST00000264638 STAB2Q8WWQ8 2551 aa7.76□□□□□ -1.17
CNTNAP1-201ENST00000264638 ITPR1Q14643 2758 aa7.75□□□□□ -1.17
CNTNAP1-201ENST00000264638 FLNCQ14315 2725 aa7.74□□□□□ -1.17
CNTNAP1-201ENST00000264638 A0A087X002 238 aa7.74□□□□□ -1.17
CNTNAP1-201ENST00000264638 KMT2BQ9UMN6 2715 aaPredicted RBP7.73□□□□□ -1.17
CNTNAP1-201ENST00000264638 A8MU10 97 aa7.72□□□□□ -1.17
CNTNAP1-201ENST00000264638 REV3LO60673 3130 aa7.71□□□□□ -1.17
CNTNAP1-201ENST00000264638 ADM2Q7Z4H4 148 aa7.71□□□□□ -1.18
CNTNAP1-201ENST00000264638 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
CNTNAP1-201ENST00000264638 FRYQ5TBA9 3013 aa7.67□□□□□ -1.18
CNTNAP1-201ENST00000264638 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
CNTNAP1-201ENST00000264638 NDUFAF8A1L188 74 aa7.65□□□□□ -1.18
CNTNAP1-201ENST00000264638 CELSR3Q9NYQ7 3312 aa7.65□□□□□ -1.18
CNTNAP1-201ENST00000264638 DMBT1Q9UGM3 2413 aaPredicted RBP7.65□□□□□ -1.18
CNTNAP1-201ENST00000264638 HIVEP1P15822 2718 aa7.65□□□□□ -1.18
CNTNAP1-201ENST00000264638 EYSQ5T1H1 3165 aa7.64□□□□□ -1.19
CNTNAP1-201ENST00000264638 SPTBN5Q9NRC6 3674 aaKnown RBP7.64□□□□□ -1.19
CNTNAP1-201ENST00000264638 SPEGQ15772 3267 aa7.62□□□□□ -1.19
CNTNAP1-201ENST00000264638 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
CNTNAP1-201ENST00000264638 COL6A3P12111 3177 aa7.59□□□□□ -1.19
CNTNAP1-201ENST00000264638 KRTAP7-1Q8IUC3 87 aa7.58□□□□□ -1.2
CNTNAP1-201ENST00000264638 TACC2O95359 2948 aa7.58□□□□□ -1.2
CNTNAP1-201ENST00000264638 NOTCH2NLQ7Z3S9 236 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms