RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 ROMO1P60602 79 aa9.16□□□□□ -0.94
NID1-201ENST00000264187 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
NID1-201ENST00000264187 H1FX-AS1Q4G0G2 97 aa9.15□□□□□ -0.95
NID1-201ENST00000264187 OXTP01178 125 aa9.13□□□□□ -0.95
NID1-201ENST00000264187 LINC00472Q9H8W2 130 aa9.13□□□□□ -0.95
NID1-201ENST00000264187 SPATA8Q6RVD6 105 aa9.11□□□□□ -0.95
NID1-201ENST00000264187 STAB1Q9NY15 2570 aa9.09□□□□□ -0.95
NID1-201ENST00000264187 SPRR1AP35321 89 aa9.08□□□□□ -0.96
NID1-201ENST00000264187 SEC61BP60468 96 aaKnown RBP9.07□□□□□ -0.96
NID1-201ENST00000264187 ITPR3Q14573 2671 aa9.07□□□□□ -0.96
NID1-201ENST00000264187 Q5VSD8 79 aa9.04□□□□□ -0.96
NID1-201ENST00000264187 PLAC4Q8WY50 150 aa9.04□□□□□ -0.96
NID1-201ENST00000264187 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
NID1-201ENST00000264187 KRTAP26-1Q6PEX3 210 aa9.02□□□□□ -0.96
NID1-201ENST00000264187 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.97
NID1-201ENST00000264187 KRTAP1-5Q9BYS1 174 aa8.99□□□□□ -0.97
NID1-201ENST00000264187 CEP350Q5VT06 3117 aa8.99□□□□□ -0.97
NID1-201ENST00000264187 AKAP13Q12802 2813 aa8.98□□□□□ -0.97
NID1-201ENST00000264187 SPRR1BP22528 89 aa8.98□□□□□ -0.97
NID1-201ENST00000264187 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
NID1-201ENST00000264187 DMBT1Q9UGM3 2413 aaPredicted RBP8.95□□□□□ -0.98
NID1-201ENST00000264187 PCNTO95613 3336 aa8.94□□□□□ -0.98
NID1-201ENST00000264187 NBEAL1Q6ZS30 2694 aa8.94□□□□□ -0.98
NID1-201ENST00000264187 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
NID1-201ENST00000264187 Q6ZR54 194 aa8.92□□□□□ -0.98
NID1-201ENST00000264187 STAB2Q8WWQ8 2551 aa8.88□□□□□ -0.99
NID1-201ENST00000264187 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
NID1-201ENST00000264187 CFAP46Q8IYW2 2715 aa8.86□□□□□ -0.99
NID1-201ENST00000264187 DNAH12Q6ZR08 3092 aa8.85□□□□□ -0.99
NID1-201ENST00000264187 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
NID1-201ENST00000264187 CHD6Q8TD26 2715 aa8.83□□□□□ -1
NID1-201ENST00000264187 PANO1I0J062 215 aa8.83□□□□□ -1
NID1-201ENST00000264187 A8MU10 97 aa8.83□□□□□ -1
NID1-201ENST00000264187 HELZ2Q9BYK8 2649 aaKnown RBP8.8□□□□□ -1
NID1-201ENST00000264187 A0A087X002 238 aa8.8□□□□□ -1
NID1-201ENST00000264187 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
NID1-201ENST00000264187 C5orf42Q9H799 3197 aa8.77□□□□□ -1.01
NID1-201ENST00000264187 CENPEQ02224 2701 aa8.76□□□□□ -1.01
NID1-201ENST00000264187 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
NID1-201ENST00000264187 LCE6AA0A183 80 aa8.74□□□□□ -1.01
NID1-201ENST00000264187 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
NID1-201ENST00000264187 TEX15Q9BXT5 2789 aa8.73□□□□□ -1.01
NID1-201ENST00000264187 NOTCH1P46531 2555 aa8.73□□□□□ -1.01
NID1-201ENST00000264187 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.01
NID1-201ENST00000264187 NDUFAF8A1L188 74 aa8.71□□□□□ -1.01
NID1-201ENST00000264187 SETXQ7Z333 2677 aaKnown RBP8.7□□□□□ -1.02
NID1-201ENST00000264187 TEP1Q99973 2627 aaKnown RBP8.69□□□□□ -1.02
NID1-201ENST00000264187 A8MUU9 505 aa8.69□□□□□ -1.02
NID1-201ENST00000264187 A6NN06 94 aa8.68□□□□□ -1.02
NID1-201ENST00000264187 KRTAP4-16G5E9R7 235 aaPredicted RBP8.66□□□□□ -1.02
NID1-201ENST00000264187 UNC79Q9P2D8 2635 aa8.63□□□□□ -1.03
NID1-201ENST00000264187 CFAP54Q96N23 3096 aa8.59□□□□□ -1.03
NID1-201ENST00000264187 GCN1Q92616 2671 aaKnown RBP8.58□□□□□ -1.04
NID1-201ENST00000264187 KRTAP11-1Q8IUC1 163 aa8.58□□□□□ -1.04
NID1-201ENST00000264187 A0A0C4DFX4 3053 aa8.58□□□□□ -1.04
NID1-201ENST00000264187 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
NID1-201ENST00000264187 MKI67P46013 3256 aaKnown RBP8.57□□□□□ -1.04
NID1-201ENST00000264187 BAHCC1Q9P281 2608 aa8.55□□□□□ -1.04
NID1-201ENST00000264187 BRCA2P51587 3418 aa8.55□□□□□ -1.04
NID1-201ENST00000264187 COL6A5A8TX70 2615 aa8.53□□□□□ -1.04
NID1-201ENST00000264187 NBEAL2Q6ZNJ1 2754 aa8.48□□□□□ -1.05
NID1-201ENST00000264187 RANBP2P49792 3224 aaKnown RBP8.47□□□□□ -1.05
NID1-201ENST00000264187 TNP1P09430 55 aa8.46□□□□□ -1.06
NID1-201ENST00000264187 LAMA3Q16787 3333 aa8.44□□□□□ -1.06
NID1-201ENST00000264187 HTTP42858 3142 aa8.44□□□□□ -1.06
NID1-201ENST00000264187 LAMA2P24043 3122 aaKnown RBP8.43□□□□□ -1.06
NID1-201ENST00000264187 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
NID1-201ENST00000264187 KRTAP7-1Q8IUC3 87 aa8.37□□□□□ -1.07
NID1-201ENST00000264187 NSD1Q96L73 2696 aaPredicted RBP8.36□□□□□ -1.07
NID1-201ENST00000264187 FREM2Q5SZK8 3169 aa8.35□□□□□ -1.07
NID1-201ENST00000264187 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
NID1-201ENST00000264187 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
NID1-201ENST00000264187 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
NID1-201ENST00000264187 MAP1AP78559 2803 aaPredicted RBP8.31□□□□□ -1.08
NID1-201ENST00000264187 FRYQ5TBA9 3013 aa8.3□□□□□ -1.08
NID1-201ENST00000264187 KMT2BQ9UMN6 2715 aaPredicted RBP8.3□□□□□ -1.08
NID1-201ENST00000264187 CHD7Q9P2D1 2997 aa8.3□□□□□ -1.08
NID1-201ENST00000264187 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
NID1-201ENST00000264187 UNC80Q8N2C7 3258 aa8.27□□□□□ -1.09
NID1-201ENST00000264187 PRUNE2Q8WUY3 3088 aa8.26□□□□□ -1.09
NID1-201ENST00000264187 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
NID1-201ENST00000264187 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
NID1-201ENST00000264187 ZNF292O60281 2723 aa8.23□□□□□ -1.09
NID1-201ENST00000264187 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.1
NID1-201ENST00000264187 CDH23Q9H251 3354 aa8.2□□□□□ -1.1
NID1-201ENST00000264187 IGSF10Q6WRI0 2623 aa8.18□□□□□ -1.1
NID1-201ENST00000264187 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
NID1-201ENST00000264187 CHD9Q3L8U1 2897 aa8.1□□□□□ -1.11
NID1-201ENST00000264187 TRIOO75962 3097 aa8.1□□□□□ -1.11
NID1-201ENST00000264187 XIRP2A4UGR9 3374 aa8.09□□□□□ -1.11
NID1-201ENST00000264187 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
NID1-201ENST00000264187 REV3LO60673 3130 aa8.06□□□□□ -1.12
NID1-201ENST00000264187 TRANK1O15050 2925 aa8.05□□□□□ -1.12
NID1-201ENST00000264187 DMXL2Q8TDJ6 3036 aa8.03□□□□□ -1.12
NID1-201ENST00000264187 ASH1LQ9NR48 2969 aaKnown RBP8.03□□□□□ -1.12
NID1-201ENST00000264187 P0C880 135 aa8.02□□□□□ -1.13
NID1-201ENST00000264187 APCP25054 2843 aa8.02□□□□□ -1.13
NID1-201ENST00000264187 SZT2Q5T011 3432 aa8.01□□□□□ -1.13
NID1-201ENST00000264187 H0YAA0 97 aa8.01□□□□□ -1.13
NID1-201ENST00000264187 ITPR2Q14571 2701 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms