RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 HELZ2Q9BYK8 2649 aaKnown RBP9.68□□□□□ -0.86
SHANK3-201ENST00000262795 XIRP2A4UGR9 3374 aa9.68□□□□□ -0.86
SHANK3-201ENST00000262795 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
SHANK3-201ENST00000262795 ITPR3Q14573 2671 aa9.67□□□□□ -0.86
SHANK3-201ENST00000262795 DMAC1Q96GE9 116 aa9.66□□□□□ -0.86
SHANK3-201ENST00000262795 KRTAP16-1A8MUX0 517 aa9.65□□□□□ -0.86
SHANK3-201ENST00000262795 ATRQ13535 2644 aa9.65□□□□□ -0.86
SHANK3-201ENST00000262795 FLNAP21333 2647 aaKnown RBP9.64□□□□□ -0.87
SHANK3-201ENST00000262795 MKI67P46013 3256 aaKnown RBP9.63□□□□□ -0.87
SHANK3-201ENST00000262795 M0QZ58 72 aa9.62□□□□□ -0.87
SHANK3-201ENST00000262795 A0A0C4DFX4 3053 aa9.62□□□□□ -0.87
SHANK3-201ENST00000262795 Q5VV11 94 aa9.61□□□□□ -0.87
SHANK3-201ENST00000262795 MAST4O15021 2626 aa9.61□□□□□ -0.87
SHANK3-201ENST00000262795 DNAH14Q0VDD8 3507 aa9.6□□□□□ -0.87
SHANK3-201ENST00000262795 CFAP46Q8IYW2 2715 aa9.6□□□□□ -0.87
SHANK3-201ENST00000262795 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
SHANK3-201ENST00000262795 H1FX-AS1Q4G0G2 97 aa9.58□□□□□ -0.88
SHANK3-201ENST00000262795 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
SHANK3-201ENST00000262795 Q8NDZ9 215 aa9.52□□□□□ -0.88
SHANK3-201ENST00000262795 ADM2Q7Z4H4 148 aa9.52□□□□□ -0.89
SHANK3-201ENST00000262795 FLG2Q5D862 2391 aaPredicted RBP9.48□□□□□ -0.89
SHANK3-201ENST00000262795 BRCA2P51587 3418 aa9.48□□□□□ -0.89
SHANK3-201ENST00000262795 ROMO1P60602 79 aa9.47□□□□□ -0.89
SHANK3-201ENST00000262795 Q5W150 140 aa9.46□□□□□ -0.89
SHANK3-201ENST00000262795 LAMA3Q16787 3333 aa9.46□□□□□ -0.89
SHANK3-201ENST00000262795 PANO1I0J062 215 aa9.44□□□□□ -0.9
SHANK3-201ENST00000262795 CFAP54Q96N23 3096 aa9.42□□□□□ -0.9
SHANK3-201ENST00000262795 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
SHANK3-201ENST00000262795 PRUNE2Q8WUY3 3088 aa9.41□□□□□ -0.9
SHANK3-201ENST00000262795 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
SHANK3-201ENST00000262795 TEX15Q9BXT5 2789 aa9.38□□□□□ -0.91
SHANK3-201ENST00000262795 TEP1Q99973 2627 aaKnown RBP9.38□□□□□ -0.91
SHANK3-201ENST00000262795 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
SHANK3-201ENST00000262795 CELSR3Q9NYQ7 3312 aa9.37□□□□□ -0.91
SHANK3-201ENST00000262795 A0A087X002 238 aa9.37□□□□□ -0.91
SHANK3-201ENST00000262795 SPATA8Q6RVD6 105 aa9.35□□□□□ -0.91
SHANK3-201ENST00000262795 NDUFAF8A1L188 74 aa9.32□□□□□ -0.92
SHANK3-201ENST00000262795 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
SHANK3-201ENST00000262795 CHD7Q9P2D1 2997 aa9.32□□□□□ -0.92
SHANK3-201ENST00000262795 RANBP2P49792 3224 aaKnown RBP9.31□□□□□ -0.92
SHANK3-201ENST00000262795 SZT2Q5T011 3432 aa9.29□□□□□ -0.92
SHANK3-201ENST00000262795 STAB1Q9NY15 2570 aa9.28□□□□□ -0.92
SHANK3-201ENST00000262795 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
SHANK3-201ENST00000262795 MGAQ8IWI9 3026 aa9.26□□□□□ -0.93
SHANK3-201ENST00000262795 LAMA2P24043 3122 aaKnown RBP9.25□□□□□ -0.93
SHANK3-201ENST00000262795 CDH23Q9H251 3354 aa9.25□□□□□ -0.93
SHANK3-201ENST00000262795 Q6ZR54 194 aa9.23□□□□□ -0.93
SHANK3-201ENST00000262795 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
SHANK3-201ENST00000262795 REV3LO60673 3130 aa9.22□□□□□ -0.93
SHANK3-201ENST00000262795 CRYBG3Q68DQ2 2970 aa9.22□□□□□ -0.93
SHANK3-201ENST00000262795 TRIOO75962 3097 aa9.22□□□□□ -0.93
SHANK3-201ENST00000262795 AKAP13Q12802 2813 aa9.21□□□□□ -0.93
SHANK3-201ENST00000262795 SPRR1AP35321 89 aa9.18□□□□□ -0.94
SHANK3-201ENST00000262795 KRTAP26-1Q6PEX3 210 aa9.18□□□□□ -0.94
SHANK3-201ENST00000262795 FREM2Q5SZK8 3169 aa9.18□□□□□ -0.94
SHANK3-201ENST00000262795 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
SHANK3-201ENST00000262795 WDFY4Q6ZS81 3184 aa9.17□□□□□ -0.94
SHANK3-201ENST00000262795 UNC80Q8N2C7 3258 aa9.17□□□□□ -0.94
SHANK3-201ENST00000262795 A8MU10 97 aa9.15□□□□□ -0.94
SHANK3-201ENST00000262795 CHD6Q8TD26 2715 aa9.15□□□□□ -0.95
SHANK3-201ENST00000262795 FRYQ5TBA9 3013 aa9.14□□□□□ -0.95
SHANK3-201ENST00000262795 A8MUU9 505 aa9.13□□□□□ -0.95
SHANK3-201ENST00000262795 KRTAP25-1Q3LHN0 102 aa9.11□□□□□ -0.95
SHANK3-201ENST00000262795 CENPEQ02224 2701 aa9.11□□□□□ -0.95
SHANK3-201ENST00000262795 SPRR1BP22528 89 aa9.08□□□□□ -0.96
SHANK3-201ENST00000262795 NBEAL1Q6ZS30 2694 aa9.06□□□□□ -0.96
SHANK3-201ENST00000262795 A6NN06 94 aa9.03□□□□□ -0.96
SHANK3-201ENST00000262795 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
SHANK3-201ENST00000262795 HTTP42858 3142 aa9.03□□□□□ -0.96
SHANK3-201ENST00000262795 VPS13AQ96RL7 3174 aa9.03□□□□□ -0.96
SHANK3-201ENST00000262795 COL6A3P12111 3177 aa9.03□□□□□ -0.96
SHANK3-201ENST00000262795 NOTCH2NLQ7Z3S9 236 aa9.02□□□□□ -0.97
SHANK3-201ENST00000262795 C10orf95Q9H7T3 257 aa9.01□□□□□ -0.97
SHANK3-201ENST00000262795 UNC79Q9P2D8 2635 aa9.01□□□□□ -0.97
SHANK3-201ENST00000262795 VCANP13611 3396 aa8.98□□□□□ -0.97
SHANK3-201ENST00000262795 COL6A5A8TX70 2615 aa8.96□□□□□ -0.97
SHANK3-201ENST00000262795 DMBT1Q9UGM3 2413 aaPredicted RBP8.96□□□□□ -0.97
SHANK3-201ENST00000262795 USP34Q70CQ2 3546 aa8.94□□□□□ -0.98
SHANK3-201ENST00000262795 KRTAP10-8P60410 259 aa8.93□□□□□ -0.98
SHANK3-201ENST00000262795 KRTAP21-3Q3LHN1 58 aa8.93□□□□□ -0.98
SHANK3-201ENST00000262795 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
SHANK3-201ENST00000262795 SPEGQ15772 3267 aa8.91□□□□□ -0.98
SHANK3-201ENST00000262795 CFAP47Q6ZTR5 3102 aa8.91□□□□□ -0.98
SHANK3-201ENST00000262795 KRTAP13-2Q52LG2 175 aa8.89□□□□□ -0.99
SHANK3-201ENST00000262795 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
SHANK3-201ENST00000262795 ITPR2Q14571 2701 aa8.87□□□□□ -0.99
SHANK3-201ENST00000262795 KRTAP29-1A8MX34 341 aaPredicted RBP8.87□□□□□ -0.99
SHANK3-201ENST00000262795 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
SHANK3-201ENST00000262795 DSPP15924 2871 aaKnown RBP8.84□□□□□ -0.99
SHANK3-201ENST00000262795 CHD9Q3L8U1 2897 aa8.83□□□□□ -1
SHANK3-201ENST00000262795 DCHS1Q96JQ0 3298 aa8.8□□□□□ -1
SHANK3-201ENST00000262795 MYO15AQ9UKN7 3530 aa8.79□□□□□ -1
SHANK3-201ENST00000262795 STAB2Q8WWQ8 2551 aa8.78□□□□□ -1
SHANK3-201ENST00000262795 KRTAP4-16G5E9R7 235 aaPredicted RBP8.77□□□□□ -1.01
SHANK3-201ENST00000262795 ZNF292O60281 2723 aa8.75□□□□□ -1.01
SHANK3-201ENST00000262795 LAMA1P25391 3075 aa8.75□□□□□ -1.01
SHANK3-201ENST00000262795 TNP1P09430 55 aa8.74□□□□□ -1.01
SHANK3-201ENST00000262795 NOTCH1P46531 2555 aa8.73□□□□□ -1.01
SHANK3-201ENST00000262795 GCN1Q92616 2671 aaKnown RBP8.73□□□□□ -1.01
SHANK3-201ENST00000262795 NBEAL2Q6ZNJ1 2754 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms