RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.93□□□□□ -0.34
CCNE1-201ENST00000262643 A0A1B0GV72 72 aa12.9□□□□□ -0.34
CCNE1-201ENST00000262643 OBSCN-AS1Q96MR7 158 aa12.89□□□□□ -0.35
CCNE1-201ENST00000262643 FAM19A1Q7Z5A9 133 aa12.89□□□□□ -0.35
CCNE1-201ENST00000262643 DHRS4-AS1Q9P1J3 65 aa12.89□□□□□ -0.35
CCNE1-201ENST00000262643 H0Y9J4 135 aa12.87□□□□□ -0.35
CCNE1-201ENST00000262643 PRLHP81277 87 aa12.87□□□□□ -0.35
CCNE1-201ENST00000262643 C14orf132Q9NPU4 83 aa12.87□□□□□ -0.35
CCNE1-201ENST00000262643 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
CCNE1-201ENST00000262643 ERC2-IT1O76042 136 aa12.86□□□□□ -0.35
CCNE1-201ENST00000262643 H3BQ85 93 aa12.86□□□□□ -0.35
CCNE1-201ENST00000262643 JMJD7-PLA2G4BH0Y9G9 81 aa12.84□□□□□ -0.35
CCNE1-201ENST00000262643 GHRHP01286 108 aa12.84□□□□□ -0.35
CCNE1-201ENST00000262643 DEFB105AQ8NG35 78 aa12.84□□□□□ -0.35
CCNE1-201ENST00000262643 SMCR5Q8TEV8 140 aa12.84□□□□□ -0.35
CCNE1-201ENST00000262643 LAMTOR3Q9UHA4 124 aa12.84□□□□□ -0.35
CCNE1-201ENST00000262643 CDIP1Q9H305 208 aa12.83□□□□□ -0.36
CCNE1-201ENST00000262643 ZNF861PO60384 105 aa12.83□□□□□ -0.36
CCNE1-201ENST00000262643 KRTAP10-8P60410 259 aa12.83□□□□□ -0.36
CCNE1-201ENST00000262643 ST20-AS1Q8NBB2 130 aa12.83□□□□□ -0.36
CCNE1-201ENST00000262643 BCE1O60756 84 aa12.81□□□□□ -0.36
CCNE1-201ENST00000262643 FAM240AA0A1B0GVK7 77 aa12.79□□□□□ -0.36
CCNE1-201ENST00000262643 LINC01547P58512 204 aaPredicted RBP12.79□□□□□ -0.36
CCNE1-201ENST00000262643 GAGE2AQ6NT46 116 aa12.79□□□□□ -0.36
CCNE1-201ENST00000262643 Q8N377 158 aa12.79□□□□□ -0.36
CCNE1-201ENST00000262643 HIGD2AQ9BW72 106 aa12.79□□□□□ -0.36
CCNE1-201ENST00000262643 UBE2AP49459 152 aa12.77□□□□□ -0.37
CCNE1-201ENST00000262643 RBM3P98179 157 aaKnown RBP12.77□□□□□ -0.37
CCNE1-201ENST00000262643 PRR26Q8N8Z3 221 aa12.77□□□□□ -0.37
CCNE1-201ENST00000262643 KRTAP1-4P0C5Y4 121 aa12.76□□□□□ -0.37
CCNE1-201ENST00000262643 NDUFV3P56181 108 aaKnown RBP12.76□□□□□ -0.37
CCNE1-201ENST00000262643 ACYP1P07311 99 aa12.75□□□□□ -0.37
CCNE1-201ENST00000262643 IGLV5-48A0A075B6I7 105 aa12.72□□□□□ -0.37
CCNE1-201ENST00000262643 KRTAP13-1Q8IUC0 172 aa12.72□□□□□ -0.37
CCNE1-201ENST00000262643 C3orf22Q8N5N4 141 aa12.72□□□□□ -0.37
CCNE1-201ENST00000262643 CCKP06307 115 aa12.72□□□□□ -0.37
CCNE1-201ENST00000262643 DSCR8Q96T75 97 aa12.71□□□□□ -0.38
CCNE1-201ENST00000262643 SIGMAR1Q99720 223 aa12.71□□□□□ -0.38
CCNE1-201ENST00000262643 LOC110117498A0A087WWA1 95 aa12.69□□□□□ -0.38
CCNE1-201ENST00000262643 Q6ZQT0 140 aa12.68□□□□□ -0.38
CCNE1-201ENST00000262643 MT-ATP8P03928 68 aa12.66□□□□□ -0.38
CCNE1-201ENST00000262643 TRBV7-4A0A0J9YYF1 115 aa12.65□□□□□ -0.38
CCNE1-201ENST00000262643 SMIM29Q86T20 159 aa12.64□□□□□ -0.39
CCNE1-201ENST00000262643 PDE6GP18545 87 aa12.64□□□□□ -0.39
CCNE1-201ENST00000262643 LINC00846Q9NV44 126 aa12.62□□□□□ -0.39
CCNE1-201ENST00000262643 ANAPC11Q9NYG5 84 aa12.62□□□□□ -0.39
CCNE1-201ENST00000262643 A0A087X002 238 aa12.59□□□□□ -0.39
CCNE1-201ENST00000262643 UBR4Q5T4S7 5183 aa12.57□□□□□ -0.4
CCNE1-201ENST00000262643 CRYGAP11844 174 aa12.57□□□□□ -0.4
CCNE1-201ENST00000262643 LINC00643Q86TS7 51 aa12.56□□□□□ -0.4
CCNE1-201ENST00000262643 SPRR1BP22528 89 aa12.55□□□□□ -0.4
CCNE1-201ENST00000262643 LRP2P98164 4655 aa12.53□□□□□ -0.4
CCNE1-201ENST00000262643 F8WEM9 126 aa12.53□□□□□ -0.4
CCNE1-201ENST00000262643 SPRR4Q96PI1 79 aa12.53□□□□□ -0.4
CCNE1-201ENST00000262643 TYMSOSQ8TAI1 123 aa12.52□□□□□ -0.4
CCNE1-201ENST00000262643 A0A0G2JQZ4 141 aa12.51□□□□□ -0.41
CCNE1-201ENST00000262643 C21orf62-AS1Q17RA5 79 aa12.51□□□□□ -0.41
CCNE1-201ENST00000262643 FAM229BQ4G0N7 80 aa12.49□□□□□ -0.41
CCNE1-201ENST00000262643 KRTAP13-2Q52LG2 175 aa12.49□□□□□ -0.41
CCNE1-201ENST00000262643 UBL5Q9BZL1 73 aa12.49□□□□□ -0.41
CCNE1-201ENST00000262643 A0A1W2PNM2 257 aa12.47□□□□□ -0.41
CCNE1-201ENST00000262643 IGLV8-61A0A075B6I0 122 aa12.46□□□□□ -0.41
CCNE1-201ENST00000262643 LINC00483Q53H64 154 aa12.46□□□□□ -0.41
CCNE1-201ENST00000262643 IGFL1Q6UW32 110 aa12.46□□□□□ -0.41
CCNE1-201ENST00000262643 ZNF706Q9Y5V0 76 aaPredicted RBP12.46□□□□□ -0.41
CCNE1-201ENST00000262643 TRBV7-7A0A0K0K1E9 115 aa12.44□□□□□ -0.42
CCNE1-201ENST00000262643 Q6JHZ5 121 aa12.44□□□□□ -0.42
CCNE1-201ENST00000262643 IGKV3D-7A0A0C4DH55 119 aa12.43□□□□□ -0.42
CCNE1-201ENST00000262643 SCGB1A1P11684 91 aa12.43□□□□□ -0.42
CCNE1-201ENST00000262643 Q6ZVQ6 151 aa12.42□□□□□ -0.42
CCNE1-201ENST00000262643 IGLV9-49A0A0B4J1Y8 123 aa12.42□□□□□ -0.42
CCNE1-201ENST00000262643 Q8NBF4 154 aa12.42□□□□□ -0.42
CCNE1-201ENST00000262643 Q6Q795 121 aa12.41□□□□□ -0.42
CCNE1-201ENST00000262643 IMUPQ9GZP8 106 aa12.38□□□□□ -0.43
CCNE1-201ENST00000262643 LPAP08519 4548 aa12.38□□□□□ -0.43
CCNE1-201ENST00000262643 PCP4P48539 62 aa12.37□□□□□ -0.43
CCNE1-201ENST00000262643 LINC00304Q8N9R0 145 aa12.37□□□□□ -0.43
CCNE1-201ENST00000262643 C9orf153Q5TBE3 101 aa12.37□□□□□ -0.43
CCNE1-201ENST00000262643 A0A1B0GW54 56 aa12.36□□□□□ -0.43
CCNE1-201ENST00000262643 PRR4Q16378 134 aa12.36□□□□□ -0.43
CCNE1-201ENST00000262643 ATP5EP2Q5VTU8 51 aa12.36□□□□□ -0.43
CCNE1-201ENST00000262643 NREPQ16612 68 aa12.32□□□□□ -0.44
CCNE1-201ENST00000262643 MOBPQ13875 183 aa12.32□□□□□ -0.44
CCNE1-201ENST00000262643 HIST1H4AP62805 103 aaKnown RBP12.28□□□□□ -0.44
CCNE1-201ENST00000262643 A0A087WSZ3 146 aa12.27□□□□□ -0.44
CCNE1-201ENST00000262643 CXCL6P80162 114 aa12.27□□□□□ -0.45
CCNE1-201ENST00000262643 RETNLBQ9BQ08 111 aa12.26□□□□□ -0.45
CCNE1-201ENST00000262643 A0A087WVE0 104 aa12.25□□□□□ -0.45
CCNE1-201ENST00000262643 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
CCNE1-201ENST00000262643 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
CCNE1-201ENST00000262643 HRCT1Q6UXD1 115 aa12.24□□□□□ -0.45
CCNE1-201ENST00000262643 C4orf48Q5BLP8 95 aa12.23□□□□□ -0.45
CCNE1-201ENST00000262643 BPY2O14599 106 aa12.21□□□□□ -0.46
CCNE1-201ENST00000262643 SPAG11AQ6PDA7 123 aa12.21□□□□□ -0.46
CCNE1-201ENST00000262643 RNF213Q63HN8 5207 aa12.2□□□□□ -0.46
CCNE1-201ENST00000262643 SSBP3-AS1Q7Z2R9 100 aa12.16□□□□□ -0.46
CCNE1-201ENST00000262643 DEFB116Q30KQ4 102 aa12.16□□□□□ -0.46
CCNE1-201ENST00000262643 ANAPC13Q9BS18 74 aa12.15□□□□□ -0.46
CCNE1-201ENST00000262643 Q8N9L7 120 aa12.15□□□□□ -0.47
CCNE1-201ENST00000262643 SPINK1P00995 79 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms